RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 FA2HQ7L5A8 372 aa1.17□□□□□ -2.22
SCFD1-219ENST00000556413 FAM19A2Q8N3H0 131 aa1.17□□□□□ -2.22
SCFD1-219ENST00000556413 DEFB105AQ8NG35 78 aa1.17□□□□□ -2.22
SCFD1-219ENST00000556413 PMCHL2Q9BQD1 86 aa1.17□□□□□ -2.22
SCFD1-219ENST00000556413 NDUFA12Q9UI09 145 aa1.17□□□□□ -2.22
SCFD1-219ENST00000556413 ZNF706Q9Y5V0 76 aaPredicted RBP1.17□□□□□ -2.22
SCFD1-219ENST00000556413 A0A1B0GW15 77 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 A6NDN8 102 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 H3BRM9 83 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 SLC25A20O43772 301 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 SPINK1P00995 79 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 PPBPP02775 128 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 MT1FP04733 61 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 IGLC3P0DOY3 106 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 DDTP30046 118 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 PEA15Q15121 130 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 SPAG11AQ6PDA7 123 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 SOSTDC1Q6X4U4 206 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 ATP5L2Q7Z4Y8 100 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 BAGE3Q86Y29 109 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 NXT2Q9NPJ8 142 aaKnown RBP1.16□□□□□ -2.22
SCFD1-219ENST00000556413 SMCO4Q9NRQ5 59 aa1.16□□□□□ -2.22
SCFD1-219ENST00000556413 TRAV23DV6A0A075B6W5 121 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 MT2AP02795 61 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 HRES1P13985 223 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 SPRR1AP35321 89 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 RPL37P61927 97 aaKnown RBP1.15□□□□□ -2.23
SCFD1-219ENST00000556413 SEC11AP67812 179 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 FABP9Q0Z7S8 132 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 MAP1LC3CQ9BXW4 147 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 GNB1LQ9BYB4 327 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 LAMTOR2Q9Y2Q5 125 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
SCFD1-219ENST00000556413 HBDP02042 147 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 MT-ND4LP03901 98 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 S100A7L2Q5SY68 101 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 C1orf195Q5TG92 126 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 Q6ZRX8 168 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 C18orf32Q8TCD1 76 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 OBSCN-AS1Q96MR7 158 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 TTTY13Q9BZ97 58 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 KCNQ1DNQ9H478 68 aa1.14□□□□□ -2.23
SCFD1-219ENST00000556413 TRAV9-1A0A075B6T8 112 aa1.13□□□□□ -2.23
SCFD1-219ENST00000556413 K7EMI3 77 aa1.13□□□□□ -2.23
SCFD1-219ENST00000556413 ZNF73O43830 326 aaPredicted RBP1.13□□□□□ -2.23
SCFD1-219ENST00000556413 C6orf99Q4VX62 202 aa1.13□□□□□ -2.23
SCFD1-219ENST00000556413 OR13C6PQ8NH95 151 aa1.13□□□□□ -2.23
SCFD1-219ENST00000556413 LIMD2Q9BT23 127 aa1.13□□□□□ -2.23
SCFD1-219ENST00000556413 FAM236DA0A1B0GTK5 79 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 MYMXA0A1B0GTQ4 84 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 A0A1B0GV72 72 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 LINC01546A6NGU7 62 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 FAM236CP0DP71 79 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 COX7BP24311 80 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 RPS29P62273 56 aaKnown RBP1.12□□□□□ -2.23
SCFD1-219ENST00000556413 COX17Q14061 63 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 SSBP3-AS1Q7Z2R9 100 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 COMMD7Q86VX2 200 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 MIEN1Q9BRT3 115 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 SEC11CQ9BY50 192 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 SPANXB1Q9NS25 103 aaPredicted RBP1.12□□□□□ -2.23
SCFD1-219ENST00000556413 TRAPPC1Q9Y5R8 145 aa1.12□□□□□ -2.23
SCFD1-219ENST00000556413 TMEM218A2RU14 115 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 H3BUT2 72 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 J3QQQ9 107 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 KMT2DO14686 5537 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 LEPROTO15243 131 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 LINC00614P0C842 121 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 FABP4P15090 132 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 S100PP25815 95 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 G0S2P27469 103 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 TAL2Q16559 108 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 IFI27L1Q96BM0 104 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 Q96NJ1 140 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 LAMTOR3Q9UHA4 124 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 R4GN34 69 aa1.11□□□□□ -2.23
SCFD1-219ENST00000556413 TRAV12-1A0A0B4J245 112 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 PSPHP1O15172 72 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 ELOF1P60002 83 aaKnown RBP1.1□□□□□ -2.23
SCFD1-219ENST00000556413 S100A12P80511 92 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 IFITM2Q01629 132 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 JOSD1Q15040 202 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-219ENST00000556413 RHEBQ15382 184 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 ATP11AUNQ6ZP68 121 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 LINC00308Q8TCZ7 52 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 C20orf166-AS1Q96NR2 134 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 C12orf57Q99622 126 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 PRO1933Q9H354 126 aa1.1□□□□□ -2.23
SCFD1-219ENST00000556413 GPR98Q8WXG9 6306 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 TRBV10-2A0A0K0K1G8 114 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 ZNF815PA8K554 130 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 HSBP1O75506 76 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 DPM2O94777 84 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 IGKCP01834 107 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 APOC3P02656 99 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 SPRR1BP22528 89 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 AKR1D1P51857 326 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 CTAG1AP78358 180 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 SLC7A5P1Q8MH63 180 aa1.09□□□□□ -2.23
SCFD1-219ENST00000556413 ATOH7Q8N100 152 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms