RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 ICOSQ9Y6W8 199 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 PKHD1P08F94 4074 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 A0A1B0GVX0 72 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 CTSGP08311 255 aa1.77□□□□□ -2.13
PRPF39-206ENST00000554429 TRBV10-3A0A0K0K1G6 114 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 C11orf86A6NJI1 115 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 CFC1P0CG37 223 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 Q6JHZ5 121 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 TRBV7-3A0A075B6L6 115 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 TRAV23DV6A0A075B6W5 121 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 H3BRN7 92 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 P0C880 135 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 MIR22HGQ0VDD5 57 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 HIGD2BQ4VC39 106 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 PSMG4Q5JS54 123 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 CYP4F30PQ9H0H9 118 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 UBE2D4Q9Y2X8 147 aa1.76□□□□□ -2.13
PRPF39-206ENST00000554429 A0A087X002 238 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 INSP01308 110 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 ASB16-AS1Q495Z4 193 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 RHPN1-AS1Q9BWJ2 59 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 APOBP04114 4563 aaKnown RBP1.75□□□□□ -2.13
PRPF39-206ENST00000554429 A8MUU9 505 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 UBE2D1P51668 147 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 CSAG1Q6PB30 78 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 GFRA4Q9GZZ7 299 aa1.75□□□□□ -2.13
PRPF39-206ENST00000554429 NEBP20929 6669 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 IGHV3-53P01767 116 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 KRTAP1-5Q9BYS1 174 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 DEFB131BA0A096LNP1 70 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 F8VRH5 84 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 H3BNG1 76 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 H7C423 109 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 BCE1O60756 84 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 SPINK13Q1W4C9 94 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 C9orf47Q6ZRZ4 202 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 NTM-AS1Q6ZSK4 140 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 Q6ZTC4 211 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 MUSTN1Q8IVN3 82 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 LYPD1Q8N2G4 141 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 MIR7-3HGQ8N6C7 128 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 LINC00612Q8N6U2 182 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 PRR15LQ9BU68 103 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 CHCHD7Q9BUK0 85 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.74□□□□□ -2.13
PRPF39-206ENST00000554429 NDUFAF8A1L188 74 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
PRPF39-206ENST00000554429 SPART-AS1P0CW21 52 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 DNAH10OSP0CZ25 163 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 CAMK2N1Q7Z7J9 78 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 SMIM2Q9BVW6 85 aa1.74□□□□□ -2.13
PRPF39-206ENST00000554429 LRP1BQ9NZR2 4599 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV2-18A0A075B6J9 118 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 PSCAO43653 123 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 DEFB131AP59861 70 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 LIMD2Q9BT23 127 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 DNAH8Q96JB1 4490 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV1-50A0A075B6I6 118 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 A0A0J9YY99 117 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 NBDYA0A0U1RRE5 68 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 BPY2O14599 106 aa1.73□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV4-69A0A075B6H9 119 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 PLNP26678 52 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 LINC00467Q9BRT7 94 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 CDC42SE2Q9NRR3 84 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 TMEM14CQ9P0S9 112 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 TOMM7Q9P0U1 55 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 DNAH5Q8TE73 4624 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 RNASE3P12724 160 aaKnown RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 Q6ZRN7 208 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 C15orf56Q8N910 161 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 Q8N9P0 234 aaPredicted RBP1.72□□□□□ -2.13
PRPF39-206ENST00000554429 MUC2Q02817 5179 aa1.72□□□□□ -2.13
PRPF39-206ENST00000554429 TRBV6-8A0A0A6YYG3 113 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 IGHV3-30P01768 117 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 IGHV3-30-5P0DP03 117 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 CLPSL2Q6UWE3 100 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 A0A096LPF7 62 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 A0A0J9YX75 114 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 COX6CP09669 75 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 SMIM29Q86T20 159 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 TRAV12-1A0A0B4J245 112 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 IGHV3-33P01772 117 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 PDE6HQ13956 83 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 C9orf129Q5T035 196 aaKnown RBP1.71□□□□□ -2.14
PRPF39-206ENST00000554429 TMEM254Q8TBM7 123 aa1.71□□□□□ -2.14
PRPF39-206ENST00000554429 TRAV21A0A0B4J279 112 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 TRBV7-4A0A0J9YYF1 115 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 DEFB4AO15263 64 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 DNAL4O96015 105 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00483Q53H64 154 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 UBE2DNLQ8IWF7 75 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 LINC00167Q96N53 147 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 CDKN2A-AS1Q9UH64 79 aa1.7□□□□□ -2.14
PRPF39-206ENST00000554429 IGIPA6NJ69 53 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms