RNA–Protein interactions for RNA: ENST00000549935.6

CALCOCO1-217, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 5

Gene CALCOCO1, Length 2,112 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-217ENST00000549935 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
CALCOCO1-217ENST00000549935 LRCOL1A6NCL2 159 aa8.08□□□□□ -1.12
CALCOCO1-217ENST00000549935 H3BPC8 53 aa8.08□□□□□ -1.12
CALCOCO1-217ENST00000549935 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
CALCOCO1-217ENST00000549935 KRTAP29-1A8MX34 341 aaPredicted RBP8.08□□□□□ -1.12
CALCOCO1-217ENST00000549935 DNAH3Q8TD57 4116 aa8.06□□□□□ -1.12
CALCOCO1-217ENST00000549935 NBEAL1Q6ZS30 2694 aa8.06□□□□□ -1.12
CALCOCO1-217ENST00000549935 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
CALCOCO1-217ENST00000549935 DNAH1Q9P2D7 4330 aa8.03□□□□□ -1.12
CALCOCO1-217ENST00000549935 PSPHP1O15172 72 aa8.03□□□□□ -1.12
CALCOCO1-217ENST00000549935 A0A087WSZ3 146 aa8.02□□□□□ -1.13
CALCOCO1-217ENST00000549935 PMAIP1Q13794 54 aa8.02□□□□□ -1.13
CALCOCO1-217ENST00000549935 WFDC13Q8IUB5 93 aa8.02□□□□□ -1.13
CALCOCO1-217ENST00000549935 COL6A5A8TX70 2615 aa8.01□□□□□ -1.13
CALCOCO1-217ENST00000549935 SEC61GP60059 68 aa8.01□□□□□ -1.13
CALCOCO1-217ENST00000549935 PRR4Q16378 134 aa8.01□□□□□ -1.13
CALCOCO1-217ENST00000549935 LINC00208Q96KT6 92 aa8.01□□□□□ -1.13
CALCOCO1-217ENST00000549935 LYSTQ99698 3801 aa7.99□□□□□ -1.13
CALCOCO1-217ENST00000549935 A0A0G2JQZ4 141 aa7.99□□□□□ -1.13
CALCOCO1-217ENST00000549935 A0A1W2PNN7 141 aa7.99□□□□□ -1.13
CALCOCO1-217ENST00000549935 A8MUN3 132 aa7.99□□□□□ -1.13
CALCOCO1-217ENST00000549935 DEFB116Q30KQ4 102 aa7.99□□□□□ -1.13
CALCOCO1-217ENST00000549935 LIMD2Q9BT23 127 aa7.99□□□□□ -1.13
CALCOCO1-217ENST00000549935 IGKV2-24A0A0C4DH68 120 aa7.98□□□□□ -1.13
CALCOCO1-217ENST00000549935 H0Y9P7 68 aa7.98□□□□□ -1.13
CALCOCO1-217ENST00000549935 SPRR1BP22528 89 aa7.98□□□□□ -1.13
CALCOCO1-217ENST00000549935 Q5VV11 94 aa7.98□□□□□ -1.13
CALCOCO1-217ENST00000549935 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
CALCOCO1-217ENST00000549935 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
CALCOCO1-217ENST00000549935 A8MWP4 228 aa7.97□□□□□ -1.13
CALCOCO1-217ENST00000549935 K7EIL1 84 aa7.97□□□□□ -1.13
CALCOCO1-217ENST00000549935 C9orf163Q8N9P6 203 aa7.97□□□□□ -1.13
CALCOCO1-217ENST00000549935 A0A096LNI7 61 aa7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 C16orf90A8MZG2 172 aa7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 CNBPP62633 177 aaKnown RBP7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 PRLHP81277 87 aa7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 KRTAP1-5Q9BYS1 174 aa7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 LINC00472Q9H8W2 130 aa7.96□□□□□ -1.13
CALCOCO1-217ENST00000549935 H0Y9J4 135 aa7.95□□□□□ -1.14
CALCOCO1-217ENST00000549935 RPL37AP61513 92 aaKnown RBP7.95□□□□□ -1.14
CALCOCO1-217ENST00000549935 DNAH10Q8IVF4 4471 aa7.95□□□□□ -1.14
CALCOCO1-217ENST00000549935 UBE2AP49459 152 aa7.94□□□□□ -1.14
CALCOCO1-217ENST00000549935 STAB2Q8WWQ8 2551 aa7.93□□□□□ -1.14
CALCOCO1-217ENST00000549935 MGAM2Q2M2H8 2515 aa7.92□□□□□ -1.14
CALCOCO1-217ENST00000549935 COL7A1Q02388 2944 aa7.91□□□□□ -1.14
CALCOCO1-217ENST00000549935 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
CALCOCO1-217ENST00000549935 LOC101927531A0A1B0GV80 90 aa7.9□□□□□ -1.15
CALCOCO1-217ENST00000549935 SRRM2Q9UQ35 2752 aaKnown RBP7.89□□□□□ -1.15
CALCOCO1-217ENST00000549935 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
CALCOCO1-217ENST00000549935 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
CALCOCO1-217ENST00000549935 Q75L30 129 aa7.88□□□□□ -1.15
CALCOCO1-217ENST00000549935 UBE2DNLQ8IWF7 75 aa7.88□□□□□ -1.15
CALCOCO1-217ENST00000549935 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
CALCOCO1-217ENST00000549935 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
CALCOCO1-217ENST00000549935 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
CALCOCO1-217ENST00000549935 ASB16-AS1Q495Z4 193 aa7.87□□□□□ -1.15
CALCOCO1-217ENST00000549935 PHF5AQ7RTV0 110 aaKnown RBP7.87□□□□□ -1.15
CALCOCO1-217ENST00000549935 KRTAP11-1Q8IUC1 163 aa7.87□□□□□ -1.15
CALCOCO1-217ENST00000549935 TENM2Q9NT68 2774 aa7.86□□□□□ -1.15
CALCOCO1-217ENST00000549935 PRR15LQ9BU68 103 aa7.85□□□□□ -1.15
CALCOCO1-217ENST00000549935 COA5Q86WW8 74 aa7.85□□□□□ -1.15
CALCOCO1-217ENST00000549935 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
CALCOCO1-217ENST00000549935 A8MU10 97 aa7.84□□□□□ -1.16
CALCOCO1-217ENST00000549935 ATP11AUNQ6ZP68 121 aa7.83□□□□□ -1.16
CALCOCO1-217ENST00000549935 CD164Q04900 197 aa7.82□□□□□ -1.16
CALCOCO1-217ENST00000549935 APLNQ9ULZ1 77 aa7.82□□□□□ -1.16
CALCOCO1-217ENST00000549935 C14orf177Q52M58 125 aa7.81□□□□□ -1.16
CALCOCO1-217ENST00000549935 Q6ZR54 194 aa7.81□□□□□ -1.16
CALCOCO1-217ENST00000549935 DNAH7Q8WXX0 4024 aa7.81□□□□□ -1.16
CALCOCO1-217ENST00000549935 MOBPQ13875 183 aa7.81□□□□□ -1.16
CALCOCO1-217ENST00000549935 LCA10Q71F78 164 aa7.8□□□□□ -1.16
CALCOCO1-217ENST00000549935 PLAC8Q9NZF1 115 aa7.8□□□□□ -1.16
CALCOCO1-217ENST00000549935 Q96NJ1 140 aa7.79□□□□□ -1.16
CALCOCO1-217ENST00000549935 LINC01558Q9Y6Z2 57 aa7.79□□□□□ -1.16
CALCOCO1-217ENST00000549935 KTN1-AS1Q86SY8 53 aa7.78□□□□□ -1.16
CALCOCO1-217ENST00000549935 KRTAP13-1Q8IUC0 172 aa7.78□□□□□ -1.16
CALCOCO1-217ENST00000549935 CDC42SE1Q9NRR8 79 aa7.77□□□□□ -1.17
CALCOCO1-217ENST00000549935 A6NED7 52 aa7.76□□□□□ -1.17
CALCOCO1-217ENST00000549935 PANO1I0J062 215 aa7.76□□□□□ -1.17
CALCOCO1-217ENST00000549935 C8orf17Q9NRJ1 99 aa7.75□□□□□ -1.17
CALCOCO1-217ENST00000549935 A6NN06 94 aa7.73□□□□□ -1.17
CALCOCO1-217ENST00000549935 NDUFS5O43920 106 aa7.73□□□□□ -1.17
CALCOCO1-217ENST00000549935 NBDYA0A0U1RRE5 68 aa7.73□□□□□ -1.17
CALCOCO1-217ENST00000549935 PCOTHQ58A44 107 aa7.73□□□□□ -1.17
CALCOCO1-217ENST00000549935 LINC00483Q53H64 154 aa7.71□□□□□ -1.18
CALCOCO1-217ENST00000549935 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.18
CALCOCO1-217ENST00000549935 MDFIQ99750 246 aa7.7□□□□□ -1.18
CALCOCO1-217ENST00000549935 A0A1B0GVX0 72 aa7.7□□□□□ -1.18
CALCOCO1-217ENST00000549935 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
CALCOCO1-217ENST00000549935 Q6ZRN7 208 aaPredicted RBP7.69□□□□□ -1.18
CALCOCO1-217ENST00000549935 IGLV9-49A0A0B4J1Y8 123 aa7.68□□□□□ -1.18
CALCOCO1-217ENST00000549935 HRES1P13985 223 aa7.68□□□□□ -1.18
CALCOCO1-217ENST00000549935 SPAG11AQ6PDA7 123 aa7.68□□□□□ -1.18
CALCOCO1-217ENST00000549935 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.68□□□□□ -1.18
CALCOCO1-217ENST00000549935 DYNC2H1Q8NCM8 4307 aaKnown RBP7.68□□□□□ -1.18
CALCOCO1-217ENST00000549935 MRPL34Q9BQ48 92 aaKnown RBP7.67□□□□□ -1.18
CALCOCO1-217ENST00000549935 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
CALCOCO1-217ENST00000549935 NUPR2A6NF83 97 aa7.65□□□□□ -1.18
CALCOCO1-217ENST00000549935 IGHV6-1A0A0B4J1U7 121 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms