RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 SPINK1P00995 79 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 MT-ATP8P03928 68 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 LGALS3P17931 250 aaKnown RBP6.67□□□□□ -1.34
GABPB1-206ENST00000543881 MOBPQ13875 183 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 KRTAP13-3Q3SY46 172 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 ETDBQ3ZM63 59 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 ADAMTSL4-AS1Q5T5F5 129 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 Q6ZRX8 168 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 PPDPFLQ8WWR9 84 aa6.67□□□□□ -1.34
GABPB1-206ENST00000543881 IGLV9-49A0A0B4J1Y8 123 aa6.66□□□□□ -1.34
GABPB1-206ENST00000543881 A0A1B0GX51 115 aa6.66□□□□□ -1.34
GABPB1-206ENST00000543881 NDUFV3P56181 108 aaKnown RBP6.66□□□□□ -1.34
GABPB1-206ENST00000543881 RPS28P62857 69 aaKnown RBP6.66□□□□□ -1.34
GABPB1-206ENST00000543881 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
GABPB1-206ENST00000543881 NPC2P61916 151 aa6.66□□□□□ -1.34
GABPB1-206ENST00000543881 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.35
GABPB1-206ENST00000543881 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.35
GABPB1-206ENST00000543881 TRAV23DV6A0A075B6W5 121 aa6.64□□□□□ -1.35
GABPB1-206ENST00000543881 LYRM7Q5U5X0 104 aa6.64□□□□□ -1.35
GABPB1-206ENST00000543881 Q8N377 158 aa6.64□□□□□ -1.35
GABPB1-206ENST00000543881 IFITM1P13164 125 aa6.63□□□□□ -1.35
GABPB1-206ENST00000543881 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
GABPB1-206ENST00000543881 TEN1Q86WV5 123 aa6.63□□□□□ -1.35
GABPB1-206ENST00000543881 RAB37Q96AX2 223 aa6.63□□□□□ -1.35
GABPB1-206ENST00000543881 ZNF73O43830 326 aaPredicted RBP6.62□□□□□ -1.35
GABPB1-206ENST00000543881 CEND1Q8N111 149 aa6.62□□□□□ -1.35
GABPB1-206ENST00000543881 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
GABPB1-206ENST00000543881 LITAFQ99732 161 aa6.62□□□□□ -1.35
GABPB1-206ENST00000543881 RPS29P62273 56 aaKnown RBP6.61□□□□□ -1.35
GABPB1-206ENST00000543881 FXYD2P54710 66 aa6.6□□□□□ -1.35
GABPB1-206ENST00000543881 CCDC179H3BU77 68 aa6.6□□□□□ -1.35
GABPB1-206ENST00000543881 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
GABPB1-206ENST00000543881 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
GABPB1-206ENST00000543881 NAA38Q9BRA0 125 aaKnown RBP6.6□□□□□ -1.35
GABPB1-206ENST00000543881 TTTY13Q9BZ97 58 aa6.59□□□□□ -1.36
GABPB1-206ENST00000543881 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
GABPB1-206ENST00000543881 J3KT08 172 aa6.58□□□□□ -1.36
GABPB1-206ENST00000543881 SLC25A20O43772 301 aa6.58□□□□□ -1.36
GABPB1-206ENST00000543881 C9orf153Q5TBE3 101 aa6.58□□□□□ -1.36
GABPB1-206ENST00000543881 TIMM17BO60830 172 aa6.57□□□□□ -1.36
GABPB1-206ENST00000543881 SNCGO76070 127 aa6.57□□□□□ -1.36
GABPB1-206ENST00000543881 IMUPQ9GZP8 106 aa6.56□□□□□ -1.36
GABPB1-206ENST00000543881 ZNF815PA8K554 130 aa6.55□□□□□ -1.36
GABPB1-206ENST00000543881 NHP2Q9NX24 153 aaKnown RBP6.55□□□□□ -1.36
GABPB1-206ENST00000543881 SPRR1BP22528 89 aa6.54□□□□□ -1.36
GABPB1-206ENST00000543881 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
GABPB1-206ENST00000543881 XP32Q5T750 250 aa6.53□□□□□ -1.36
GABPB1-206ENST00000543881 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
GABPB1-206ENST00000543881 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
GABPB1-206ENST00000543881 MT1HP80294 61 aa6.53□□□□□ -1.36
GABPB1-206ENST00000543881 DHRS4-AS1Q9P1J3 65 aa6.53□□□□□ -1.36
GABPB1-206ENST00000543881 CFC1BP0CG36 223 aa6.52□□□□□ -1.37
GABPB1-206ENST00000543881 ELOF1P60002 83 aaKnown RBP6.52□□□□□ -1.37
GABPB1-206ENST00000543881 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
GABPB1-206ENST00000543881 C6orf99Q4VX62 202 aa6.52□□□□□ -1.37
GABPB1-206ENST00000543881 C9JAW5 83 aa6.51□□□□□ -1.37
GABPB1-206ENST00000543881 COX7BP24311 80 aa6.51□□□□□ -1.37
GABPB1-206ENST00000543881 HRCT1Q6UXD1 115 aa6.51□□□□□ -1.37
GABPB1-206ENST00000543881 K7ERJ3 54 aa6.5□□□□□ -1.37
GABPB1-206ENST00000543881 SCGB1C2P0DMR2 95 aa6.5□□□□□ -1.37
GABPB1-206ENST00000543881 UQCRQO14949 82 aa6.49□□□□□ -1.37
GABPB1-206ENST00000543881 DEFB105AQ8NG35 78 aa6.48□□□□□ -1.37
GABPB1-206ENST00000543881 LAMTOR3Q9UHA4 124 aa6.48□□□□□ -1.37
GABPB1-206ENST00000543881 Q1RN00 199 aa6.47□□□□□ -1.37
GABPB1-206ENST00000543881 SCGB1D4Q6XE38 83 aa6.47□□□□□ -1.37
GABPB1-206ENST00000543881 SMIM29Q86T20 159 aa6.47□□□□□ -1.37
GABPB1-206ENST00000543881 ANKRD29Q8N6D5 301 aa6.47□□□□□ -1.37
GABPB1-206ENST00000543881 LIMD2Q9BT23 127 aa6.47□□□□□ -1.37
GABPB1-206ENST00000543881 TRBV7-6A0A0J9YX20 115 aa6.46□□□□□ -1.38
GABPB1-206ENST00000543881 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.38
GABPB1-206ENST00000543881 TEX49A0A1B0GTD5 131 aa6.45□□□□□ -1.38
GABPB1-206ENST00000543881 MUSTN1Q8IVN3 82 aa6.45□□□□□ -1.38
GABPB1-206ENST00000543881 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
GABPB1-206ENST00000543881 A0A0G2JQZ4 141 aa6.44□□□□□ -1.38
GABPB1-206ENST00000543881 C9orf92A6NGG3 77 aa6.44□□□□□ -1.38
GABPB1-206ENST00000543881 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
GABPB1-206ENST00000543881 LOC100996750A0A140TA64 210 aa6.43□□□□□ -1.38
GABPB1-206ENST00000543881 H7C2G1 150 aa6.43□□□□□ -1.38
GABPB1-206ENST00000543881 ACYP1P07311 99 aa6.43□□□□□ -1.38
GABPB1-206ENST00000543881 CD164Q04900 197 aa6.43□□□□□ -1.38
GABPB1-206ENST00000543881 KRTAP4-6Q9BYQ5 205 aa6.43□□□□□ -1.38
GABPB1-206ENST00000543881 PSMB2P49721 201 aa6.42□□□□□ -1.38
GABPB1-206ENST00000543881 TMEM258P61165 79 aa6.42□□□□□ -1.38
GABPB1-206ENST00000543881 PCOTHQ58A44 107 aa6.42□□□□□ -1.38
GABPB1-206ENST00000543881 IGLV8-61A0A075B6I0 122 aa6.41□□□□□ -1.38
GABPB1-206ENST00000543881 TCL1BO95988 128 aa6.41□□□□□ -1.38
GABPB1-206ENST00000543881 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
GABPB1-206ENST00000543881 COX7CP15954 63 aa6.41□□□□□ -1.38
GABPB1-206ENST00000543881 SMIM11BQ8TCY0 68 aa6.41□□□□□ -1.38
GABPB1-206ENST00000543881 COPS9Q8WXC6 57 aa6.41□□□□□ -1.38
GABPB1-206ENST00000543881 KRTAP9-7A8MTY7 169 aa6.4□□□□□ -1.39
GABPB1-206ENST00000543881 H3BT86 120 aa6.4□□□□□ -1.39
GABPB1-206ENST00000543881 C1orf195Q5TG92 126 aa6.4□□□□□ -1.39
GABPB1-206ENST00000543881 Q5XG85 94 aa6.4□□□□□ -1.39
GABPB1-206ENST00000543881 M0R2T5 61 aa6.39□□□□□ -1.39
GABPB1-206ENST00000543881 TRAV13-2A0A0B4J235 113 aa6.37□□□□□ -1.39
GABPB1-206ENST00000543881 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.36□□□□□ -1.39
GABPB1-206ENST00000543881 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
GABPB1-206ENST00000543881 ATXN8Q156A1 80 aa6.36□□□□□ -1.39
GABPB1-206ENST00000543881 A0A0B4J2C4 111 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms