RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 LOC107984156A0A0G2JMH3 177 aa2.32□□□□□ -2.04
LIMS1-214ENST00000542845 TCL1BO95988 128 aa2.32□□□□□ -2.04
LIMS1-214ENST00000542845 HINT1P49773 126 aaPredicted RBP2.32□□□□□ -2.04
LIMS1-214ENST00000542845 ARL17AQ8IVW1 177 aa2.32□□□□□ -2.04
LIMS1-214ENST00000542845 RBM12B-AS1Q9P1G2 102 aa2.32□□□□□ -2.04
LIMS1-214ENST00000542845 NAT8Q9UHE5 227 aa2.32□□□□□ -2.04
LIMS1-214ENST00000542845 TRAV23DV6A0A075B6W5 121 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 SMIM26A0A096LP01 95 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 A6NN06 94 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 IGLC3P0DOY3 106 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 HERVK_113P61574 105 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 Q5XG85 94 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 SFTA2Q6UW10 78 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 ATP5L2Q7Z4Y8 100 aa2.31□□□□□ -2.04
LIMS1-214ENST00000542845 ZNF73O43830 326 aaPredicted RBP2.3□□□□□ -2.04
LIMS1-214ENST00000542845 SPRR1BP22528 89 aa2.3□□□□□ -2.04
LIMS1-214ENST00000542845 SLC51BQ86UW2 128 aa2.3□□□□□ -2.04
LIMS1-214ENST00000542845 C11orf86A6NJI1 115 aa2.29□□□□□ -2.04
LIMS1-214ENST00000542845 NPC2P61916 151 aa2.29□□□□□ -2.04
LIMS1-214ENST00000542845 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
LIMS1-214ENST00000542845 KRTAP2-1Q9BYU5 128 aa2.29□□□□□ -2.04
LIMS1-214ENST00000542845 TRBV10-2A0A0K0K1G8 114 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 FAM240AA0A1B0GVK7 77 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 LINC01549A6NIU2 74 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 IGFL1Q6UW32 110 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 BAGE3Q86Y29 109 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 OR13C6PQ8NH95 151 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 MIEN1Q9BRT3 115 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 SMCO4Q9NRQ5 59 aa2.28□□□□□ -2.04
LIMS1-214ENST00000542845 SPANXB1Q9NS25 103 aaPredicted RBP2.28□□□□□ -2.04
LIMS1-214ENST00000542845 TEX49A0A1B0GTD5 131 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 LINC00587B1AMM8 73 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 C9JQL5 133 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 SPRR2EP22531 72 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 SPRR2BP35325 72 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 SPRR2AP35326 72 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 PSMB2P49721 201 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 FA2HQ7L5A8 372 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 COMMD7Q86VX2 200 aa2.27□□□□□ -2.05
LIMS1-214ENST00000542845 MYMXA0A1B0GTQ4 84 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 TMEM223A0PJW6 202 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 A8MWP4 228 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 HRES1P13985 223 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 RGS21Q2M5E4 152 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 SLC7A5P1Q8MH63 180 aa2.26□□□□□ -2.05
LIMS1-214ENST00000542845 A8MUU9 505 aa2.25□□□□□ -2.05
LIMS1-214ENST00000542845 HBDP02042 147 aa2.25□□□□□ -2.05
LIMS1-214ENST00000542845 COX7BP24311 80 aa2.25□□□□□ -2.05
LIMS1-214ENST00000542845 PMCHL1Q16048 86 aa2.25□□□□□ -2.05
LIMS1-214ENST00000542845 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
LIMS1-214ENST00000542845 NDUFC2O95298 119 aa2.24□□□□□ -2.05
LIMS1-214ENST00000542845 PEA15Q15121 130 aa2.24□□□□□ -2.05
LIMS1-214ENST00000542845 RHEBQ15382 184 aa2.24□□□□□ -2.05
LIMS1-214ENST00000542845 CBY1Q9Y3M2 126 aa2.24□□□□□ -2.05
LIMS1-214ENST00000542845 LINC01546A6NGU7 62 aa2.23□□□□□ -2.05
LIMS1-214ENST00000542845 LST1O00453 97 aa2.23□□□□□ -2.05
LIMS1-214ENST00000542845 OBSCNQ5VST9 7968 aa2.23□□□□□ -2.05
LIMS1-214ENST00000542845 F8WEM9 126 aa2.22□□□□□ -2.05
LIMS1-214ENST00000542845 NDUFS5O43920 106 aa2.22□□□□□ -2.05
LIMS1-214ENST00000542845 MT-ND4LP03901 98 aa2.22□□□□□ -2.05
LIMS1-214ENST00000542845 ELOF1P60002 83 aaKnown RBP2.22□□□□□ -2.05
LIMS1-214ENST00000542845 C5orf47Q569G3 176 aa2.22□□□□□ -2.05
LIMS1-214ENST00000542845 SOSTDC1Q6X4U4 206 aa2.22□□□□□ -2.05
LIMS1-214ENST00000542845 SPRR2FQ96RM1 72 aa2.22□□□□□ -2.05
LIMS1-214ENST00000542845 A0A096LNJ9 63 aa2.21□□□□□ -2.06
LIMS1-214ENST00000542845 TRBV7-7A0A0K0K1E9 115 aa2.21□□□□□ -2.06
LIMS1-214ENST00000542845 TSPEAR-AS2P59090 65 aa2.21□□□□□ -2.06
LIMS1-214ENST00000542845 FABP9Q0Z7S8 132 aa2.21□□□□□ -2.06
LIMS1-214ENST00000542845 PSPHP1O15172 72 aa2.2□□□□□ -2.06
LIMS1-214ENST00000542845 LINC00614P0C842 121 aa2.2□□□□□ -2.06
LIMS1-214ENST00000542845 DEFB116Q30KQ4 102 aa2.2□□□□□ -2.06
LIMS1-214ENST00000542845 IGLV5-48A0A075B6I7 105 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 A0A1B0GVX0 72 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 LEPROTO15243 131 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 SPRR2DP22532 72 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 IFITM2Q01629 132 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 TCTE3Q8IZS6 198 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 IMUPQ9GZP8 106 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 PRO0628Q9UI54 55 aa2.19□□□□□ -2.06
LIMS1-214ENST00000542845 J3QQQ9 107 aa2.18□□□□□ -2.06
LIMS1-214ENST00000542845 LINC00313P59037 77 aa2.18□□□□□ -2.06
LIMS1-214ENST00000542845 KRTAP10-5P60370 271 aa2.18□□□□□ -2.06
LIMS1-214ENST00000542845 Q5VV11 94 aa2.18□□□□□ -2.06
LIMS1-214ENST00000542845 CLEC2BQ92478 149 aa2.18□□□□□ -2.06
LIMS1-214ENST00000542845 ANAPC13Q9BS18 74 aa2.18□□□□□ -2.06
LIMS1-214ENST00000542845 IGHV6-1A0A0B4J1U7 121 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 TRAV12-1A0A0B4J245 112 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 A0A1W2PNM2 257 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 BPY2O14599 106 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 MT1BP07438 61 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 Q6JHZ5 121 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 LINC00308Q8TCZ7 52 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 IFI27L1Q96BM0 104 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 SPANXDQ9BXN6 97 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 SEC11CQ9BY50 192 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 SPANXCQ9NY87 97 aa2.17□□□□□ -2.06
LIMS1-214ENST00000542845 TRAV13-2A0A0B4J235 113 aa2.16□□□□□ -2.06
LIMS1-214ENST00000542845 COLCA2A8K830 154 aa2.16□□□□□ -2.06
LIMS1-214ENST00000542845 OCIAD2Q56VL3 154 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms