RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 A0A1W2PNN7 141 aa5.32□□□□□ -1.56
PRKAB1-207ENST00000542698 LIMD2Q9BT23 127 aa5.31□□□□□ -1.56
PRKAB1-207ENST00000542698 APCP25054 2843 aa5.31□□□□□ -1.56
PRKAB1-207ENST00000542698 TRAV22A0A0B4J277 110 aa5.31□□□□□ -1.56
PRKAB1-207ENST00000542698 CASC10Q5T4H9 136 aa5.31□□□□□ -1.56
PRKAB1-207ENST00000542698 TP53AIP1Q9HCN2 124 aa5.3□□□□□ -1.56
PRKAB1-207ENST00000542698 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
PRKAB1-207ENST00000542698 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
PRKAB1-207ENST00000542698 MDFIQ99750 246 aa5.29□□□□□ -1.56
PRKAB1-207ENST00000542698 A8MWP4 228 aa5.29□□□□□ -1.56
PRKAB1-207ENST00000542698 LY6G6CO95867 125 aa5.29□□□□□ -1.56
PRKAB1-207ENST00000542698 FBN3Q75N90 2809 aa5.29□□□□□ -1.56
PRKAB1-207ENST00000542698 IGLV5-52A0A0A0MRZ9 124 aa5.28□□□□□ -1.56
PRKAB1-207ENST00000542698 SEC61GP60059 68 aa5.28□□□□□ -1.56
PRKAB1-207ENST00000542698 MOBPQ13875 183 aa5.28□□□□□ -1.56
PRKAB1-207ENST00000542698 PRR15Q8IV56 129 aa5.27□□□□□ -1.57
PRKAB1-207ENST00000542698 WIPF1O43516 503 aa5.27□□□□□ -1.57
PRKAB1-207ENST00000542698 NSD1Q96L73 2696 aaPredicted RBP5.27□□□□□ -1.57
PRKAB1-207ENST00000542698 IGLV5-37A0A075B6J1 123 aa5.26□□□□□ -1.57
PRKAB1-207ENST00000542698 NBDYA0A0U1RRE5 68 aa5.26□□□□□ -1.57
PRKAB1-207ENST00000542698 NIPBLQ6KC79 2804 aaeCLIP5.26□□□□□ -1.57
PRKAB1-207ENST00000542698 K7EIL1 84 aa5.26□□□□□ -1.57
PRKAB1-207ENST00000542698 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
PRKAB1-207ENST00000542698 J3QL48 77 aa5.25□□□□□ -1.57
PRKAB1-207ENST00000542698 A8MUN3 132 aa5.25□□□□□ -1.57
PRKAB1-207ENST00000542698 DSCR10P59022 87 aa5.24□□□□□ -1.57
PRKAB1-207ENST00000542698 TENM4Q6N022 2769 aa5.24□□□□□ -1.57
PRKAB1-207ENST00000542698 C1orf134Q5TEV5 83 aa5.24□□□□□ -1.57
PRKAB1-207ENST00000542698 C9orf163Q8N9P6 203 aa5.24□□□□□ -1.57
PRKAB1-207ENST00000542698 Q5XG85 94 aa5.23□□□□□ -1.57
PRKAB1-207ENST00000542698 SPAG11AQ6PDA7 123 aa5.23□□□□□ -1.57
PRKAB1-207ENST00000542698 HIVEP1P15822 2718 aa5.23□□□□□ -1.57
PRKAB1-207ENST00000542698 KRTAP26-1Q6PEX3 210 aa5.23□□□□□ -1.57
PRKAB1-207ENST00000542698 SPRR1AP35321 89 aa5.22□□□□□ -1.57
PRKAB1-207ENST00000542698 CNBPP62633 177 aaKnown RBP5.22□□□□□ -1.57
PRKAB1-207ENST00000542698 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
PRKAB1-207ENST00000542698 OXTP01178 125 aa5.21□□□□□ -1.58
PRKAB1-207ENST00000542698 RTL8CO15255 209 aa5.2□□□□□ -1.58
PRKAB1-207ENST00000542698 FP248Q71RG6 208 aaPredicted RBP5.19□□□□□ -1.58
PRKAB1-207ENST00000542698 COA5Q86WW8 74 aa5.19□□□□□ -1.58
PRKAB1-207ENST00000542698 MRPL34Q9BQ48 92 aaKnown RBP5.19□□□□□ -1.58
PRKAB1-207ENST00000542698 ACYP2P14621 99 aa5.19□□□□□ -1.58
PRKAB1-207ENST00000542698 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
PRKAB1-207ENST00000542698 SPANXA2-OT1Q8N9U9 137 aa5.17□□□□□ -1.58
PRKAB1-207ENST00000542698 CYP4F30PQ9H0H9 118 aa5.17□□□□□ -1.58
PRKAB1-207ENST00000542698 ZNF469Q96JG9 3925 aaPredicted RBP5.16□□□□□ -1.58
PRKAB1-207ENST00000542698 STAB2Q8WWQ8 2551 aa5.16□□□□□ -1.58
PRKAB1-207ENST00000542698 LOC101927531A0A1B0GV80 90 aa5.16□□□□□ -1.58
PRKAB1-207ENST00000542698 IGKV2D-30A0A075B6S6 120 aa5.15□□□□□ -1.58
PRKAB1-207ENST00000542698 A0A1B0GVX0 72 aa5.15□□□□□ -1.58
PRKAB1-207ENST00000542698 IGKV2-30P06310 120 aa5.15□□□□□ -1.58
PRKAB1-207ENST00000542698 ZNF861PO60384 105 aa5.15□□□□□ -1.59
PRKAB1-207ENST00000542698 LINC00313P59037 77 aa5.15□□□□□ -1.59
PRKAB1-207ENST00000542698 APLNQ9ULZ1 77 aa5.15□□□□□ -1.59
PRKAB1-207ENST00000542698 FAM229BQ4G0N7 80 aa5.14□□□□□ -1.59
PRKAB1-207ENST00000542698 AKAP9Q99996 3911 aa5.14□□□□□ -1.59
PRKAB1-207ENST00000542698 Q1T7F1 81 aa5.14□□□□□ -1.59
PRKAB1-207ENST00000542698 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
PRKAB1-207ENST00000542698 A0A1B0GU69 56 aa5.13□□□□□ -1.59
PRKAB1-207ENST00000542698 SPINK1P00995 79 aa5.13□□□□□ -1.59
PRKAB1-207ENST00000542698 SPACA4Q8TDM5 124 aa5.13□□□□□ -1.59
PRKAB1-207ENST00000542698 TNP2Q05952 138 aa5.13□□□□□ -1.59
PRKAB1-207ENST00000542698 A0A087WTM6 91 aa5.13□□□□□ -1.59
PRKAB1-207ENST00000542698 NBPF19A0A087WUL8 3843 aa5.13□□□□□ -1.59
PRKAB1-207ENST00000542698 KRTAP4-16G5E9R7 235 aaPredicted RBP5.12□□□□□ -1.59
PRKAB1-207ENST00000542698 CUBNO60494 3623 aa5.12□□□□□ -1.59
PRKAB1-207ENST00000542698 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
PRKAB1-207ENST00000542698 C8orf87E5RJ46 101 aa5.11□□□□□ -1.59
PRKAB1-207ENST00000542698 FAM229AH3BQW9 127 aa5.11□□□□□ -1.59
PRKAB1-207ENST00000542698 K7ERS5 55 aa5.11□□□□□ -1.59
PRKAB1-207ENST00000542698 SSBP3-AS1Q7Z2R9 100 aa5.11□□□□□ -1.59
PRKAB1-207ENST00000542698 IGLV8-61A0A075B6I0 122 aa5.1□□□□□ -1.59
PRKAB1-207ENST00000542698 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
PRKAB1-207ENST00000542698 SPRR1BP22528 89 aa5.08□□□□□ -1.6
PRKAB1-207ENST00000542698 ATP11AUNQ6ZP68 121 aa5.08□□□□□ -1.6
PRKAB1-207ENST00000542698 LINC00472Q9H8W2 130 aa5.08□□□□□ -1.6
PRKAB1-207ENST00000542698 KRTAP1-5Q9BYS1 174 aa5.07□□□□□ -1.6
PRKAB1-207ENST00000542698 IGLV7-46A0A075B6I9 117 aa5.07□□□□□ -1.6
PRKAB1-207ENST00000542698 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.07□□□□□ -1.6
PRKAB1-207ENST00000542698 MMP24-AS1A0A0U1RRL7 71 aa5.06□□□□□ -1.6
PRKAB1-207ENST00000542698 IGLV7-43P04211 117 aa5.06□□□□□ -1.6
PRKAB1-207ENST00000542698 Q8N9P0 234 aaPredicted RBP5.05□□□□□ -1.6
PRKAB1-207ENST00000542698 PDZD2O15018 2839 aa5.05□□□□□ -1.6
PRKAB1-207ENST00000542698 TYMSOSQ8TAI1 123 aa5.05□□□□□ -1.6
PRKAB1-207ENST00000542698 PRR26Q8N8Z3 221 aa5.03□□□□□ -1.6
PRKAB1-207ENST00000542698 ANK3Q12955 4377 aaKnown RBP5.03□□□□□ -1.6
PRKAB1-207ENST00000542698 PLA2G1BP04054 148 aaKnown RBP5.03□□□□□ -1.6
PRKAB1-207ENST00000542698 Q96NJ1 140 aa5.03□□□□□ -1.6
PRKAB1-207ENST00000542698 ZCCHC13Q8WW36 166 aaKnown RBP5.02□□□□□ -1.61
PRKAB1-207ENST00000542698 UQCR11O14957 56 aa5.01□□□□□ -1.61
PRKAB1-207ENST00000542698 KRTAP7-1Q8IUC3 87 aa5.01□□□□□ -1.61
PRKAB1-207ENST00000542698 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
PRKAB1-207ENST00000542698 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
PRKAB1-207ENST00000542698 CD164Q04900 197 aa5□□□□□ -1.61
PRKAB1-207ENST00000542698 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
PRKAB1-207ENST00000542698 Q5VV11 94 aa4.99□□□□□ -1.61
PRKAB1-207ENST00000542698 Q75L30 129 aa4.98□□□□□ -1.61
PRKAB1-207ENST00000542698 TENM3Q9P273 2699 aa4.98□□□□□ -1.61
PRKAB1-207ENST00000542698 OTOGQ6ZRI0 2925 aa4.97□□□□□ -1.61
PRKAB1-207ENST00000542698 H3BS24 57 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms