RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 CST9LQ9H4G1 147 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 CBY1Q9Y3M2 126 aa0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 LSM5Q9Y4Y9 91 aaKnown RBP0.49□□□□□ -2.33
TRAV1-1-201ENST00000542354 IGLV5-48A0A075B6I7 105 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 A0A096LNJ9 63 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 FAM25AB3EWG3 89 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 FAM25CB3EWG5 89 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 FAM25GB3EWG6 89 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 SPINK8P0C7L1 97 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 SMIM6P0DI80 62 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100PP25815 95 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 IL15RAQ13261 267 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 C4orf26Q17RF5 130 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 CLLU1Q5K131 121 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 C1orf146Q5VVC0 180 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 SFTA2Q6UW10 78 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 TCTE3Q8IZS6 198 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 STOML3Q8TAV4 291 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 SFT2D1Q8WV19 159 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 C12orf57Q99622 126 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 TCEAL7Q9BRU2 100 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 Q9H521 79 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 TPRKBQ9Y3C4 175 aa0.48□□□□□ -2.33
TRAV1-1-201ENST00000542354 IGHV6-1A0A0B4J1U7 121 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 A0A0U1RRA0 63 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 A0A1B0GV90 55 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 PCP4L1A6NKN8 68 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 FAM74A7A6NL05 159 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 CENPXA8MT69 81 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 HSBP1L1C9JCN9 74 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 MPC2O95563 127 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100A8P05109 93 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 GIPP09681 153 aaPredicted RBP0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 LINC00614P0C842 121 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 IL7P13232 177 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 RAB4AP20338 218 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 FAM74A3Q4VXF1 159 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 MCFD2Q8NI22 146 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 S100ZQ8WXG8 99 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 C14orf144Q96I85 54 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 C20orf78Q9BR46 151 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 BIN3Q9NQY0 253 aa0.47□□□□□ -2.33
TRAV1-1-201ENST00000542354 TRBV24-1A0A075B6N3 115 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 TRAV13-2A0A0B4J235 113 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 TMEM218A2RU14 115 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 HMSDA8MTL9 139 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 C8orf87E5RJ46 101 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 H3BRM9 83 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 M0QZ58 72 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 PLA2G10O15496 165 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 RGS5O15539 181 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 DLEU1O43261 78 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 MRPS10P82664 201 aaKnown RBP0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 NEDD8Q15843 81 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 COX19Q49B96 90 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 PYY3Q5JQD4 70 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 ADM2Q7Z4H4 148 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 COMMD7Q86VX2 200 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 YPEL4Q96NS1 127 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 HSPB11Q9Y547 144 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 V9GYH0 126 aa0.46□□□□□ -2.34
TRAV1-1-201ENST00000542354 TINCRA0A1B0GVN0 87 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 TMEM223A0PJW6 202 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 E9PLD3 99 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMKR1H3BMG3 65 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMLR1H3BR10 107 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 ARPC5O15511 151 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 MBP02144 154 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 APOC3P02656 99 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 MT-ND4LP03901 98 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 ADCYAP1P18509 176 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 COX7BP24311 80 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 G0S2P27469 103 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 BTCP35070 178 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 FABP9Q0Z7S8 132 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 DEFB116Q30KQ4 102 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 OCIAD2Q56VL3 154 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 COA6Q5JTJ3 125 aaKnown RBP0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 UQCC3Q6UW78 93 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 SVBPQ8N300 66 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 SNHG12Q9BXW3 62 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 ACTR3CQ9C0K3 210 aaPredicted RBP0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMCO4Q9NRQ5 59 aa0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 SPANXB1Q9NS25 103 aaPredicted RBP0.45□□□□□ -2.34
TRAV1-1-201ENST00000542354 BORCS7-ASMTA0A0B4J1R7 106 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 FAM240BA0A1B0GVZ2 78 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 C9JQL5 133 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 TSTD3H0UI37 97 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 H0Y8G0 127 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 M0R143 59 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 LYRM1O43325 122 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 SMIM13P0DJ93 91 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 SCGB1A1P11684 91 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 CEBPGP53567 150 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 ELOF1P60002 83 aaKnown RBP0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 LSM3P62310 102 aaKnown RBP0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 PEA15Q15121 130 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 CAMK2N1Q7Z7J9 78 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 HIST3H2BBQ8N257 126 aa0.44□□□□□ -2.34
TRAV1-1-201ENST00000542354 KCNRGQ8N5I3 272 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms