RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PRB2P02812 416 aaPredicted RBP2.68□□□□□ -1.98
SNHG1-219ENST00000542112 WFDC13Q8IUB5 93 aa2.68□□□□□ -1.98
SNHG1-219ENST00000542112 UTP20O75691 2785 aaKnown RBP2.68□□□□□ -1.98
SNHG1-219ENST00000542112 HELZ2Q9BYK8 2649 aaKnown RBP2.68□□□□□ -1.98
SNHG1-219ENST00000542112 POLQO75417 2590 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 ABCA12Q86UK0 2595 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 TRGV1A0A0A0MS02 117 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 IGKV2-24A0A0C4DH68 120 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 EGFEM1PQ0D2K5 195 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 CASC10Q5T4H9 136 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 KRTAP26-1Q6PEX3 210 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 CSNK1G2-AS1Q8NCQ2 148 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 C16orf74Q96GX8 76 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 C20orf166-AS1Q96NR2 134 aa2.67□□□□□ -1.98
SNHG1-219ENST00000542112 H3BUX3 64 aa2.66□□□□□ -1.98
SNHG1-219ENST00000542112 WFDC10BQ8IUB3 73 aa2.66□□□□□ -1.98
SNHG1-219ENST00000542112 CENPEQ02224 2701 aa2.66□□□□□ -1.98
SNHG1-219ENST00000542112 FASNP49327 2511 aaKnown RBP2.66□□□□□ -1.98
SNHG1-219ENST00000542112 TLN2Q9Y4G6 2542 aa2.66□□□□□ -1.98
SNHG1-219ENST00000542112 TACC2O95359 2948 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 IGLV7-43P04211 117 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 P0C880 135 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 LYNX1P0DP58 116 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 Q5W150 140 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 C7orf33Q8WU49 177 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 C8orf17Q9NRJ1 99 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 CREBBPQ92793 2442 aa2.65□□□□□ -1.99
SNHG1-219ENST00000542112 APCP25054 2843 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 NBPF19A0A087WUL8 3843 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 ITPR3Q14573 2671 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 ZANQ9Y493 2812 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 IGKV3OR2-268A0A0C4DH90 116 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 DNAH10OSP0CZ25 163 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 HTN1P15515 57 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 LCE1AQ5T7P2 110 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 CRYBG3Q68DQ2 2970 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 Q6ZRX8 168 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 ANAPC11Q9NYG5 84 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 C6orf48Q9UBA6 75 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 ACANP16112 2415 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 ITPR2Q14571 2701 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 FBN2P35556 2912 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 PDZD2O15018 2839 aa2.64□□□□□ -1.99
SNHG1-219ENST00000542112 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 TEX15Q9BXT5 2789 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 MYO9AB2RTY4 2548 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 SORL1Q92673 2214 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 CYSRT1A8MQ03 144 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 A8MUU9 505 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 KRTAP4-16G5E9R7 235 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-219ENST00000542112 SPRR1AP35321 89 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 SONP18583 2426 aaKnown RBP2.63□□□□□ -1.99
SNHG1-219ENST00000542112 CCDC168Q8NDH2 2452 aa2.63□□□□□ -1.99
SNHG1-219ENST00000542112 NAV2Q8IVL1 2488 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 COL12A1Q99715 3063 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 MMP24-AS1A0A0U1RRL7 71 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 DEFB113Q30KQ7 82 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 PCOTHQ58A44 107 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 UNQ6190/PRO20217Q6UXQ8 127 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 CAMK2N1Q7Z7J9 78 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 KRTAP17-1Q9BYP8 105 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 LINC00472Q9H8W2 130 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 FLNAP21333 2647 aaKnown RBP2.62□□□□□ -1.99
SNHG1-219ENST00000542112 CELSR2Q9HCU4 2923 aa2.62□□□□□ -1.99
SNHG1-219ENST00000542112 MAP1AP78559 2803 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-219ENST00000542112 A6NDX4 124 aa2.61□□□□□ -1.99
SNHG1-219ENST00000542112 TLX1NBP0CAT3 122 aa2.61□□□□□ -1.99
SNHG1-219ENST00000542112 KRTAP10-9P60411 292 aa2.61□□□□□ -1.99
SNHG1-219ENST00000542112 ASH1LQ9NR48 2969 aaKnown RBP2.61□□□□□ -1.99
SNHG1-219ENST00000542112 RPL37AP61513 92 aaKnown RBP2.6□□□□□ -1.99
SNHG1-219ENST00000542112 CLPSL2Q6UWE3 100 aa2.6□□□□□ -1.99
SNHG1-219ENST00000542112 C4orf3Q8WVX3 66 aa2.6□□□□□ -1.99
SNHG1-219ENST00000542112 CCL19Q99731 98 aa2.6□□□□□ -1.99
SNHG1-219ENST00000542112 ZNF469Q96JG9 3925 aaPredicted RBP2.6□□□□□ -1.99
SNHG1-219ENST00000542112 UNC79Q9P2D8 2635 aa2.6□□□□□ -1.99
SNHG1-219ENST00000542112 WNK1Q9H4A3 2382 aa2.6□□□□□ -1.99
SNHG1-219ENST00000542112 VPS13CQ709C8 3753 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 GCN1Q92616 2671 aaKnown RBP2.59□□□□□ -1.99
SNHG1-219ENST00000542112 ANK3Q12955 4377 aaKnown RBP2.59□□□□□ -1.99
SNHG1-219ENST00000542112 MXRA5Q9NR99 2828 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 LY6G6CO95867 125 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 KRTAP24-1Q3LI83 254 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 IGFL1Q6UW32 110 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 DEFB105AQ8NG35 78 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 PRO0255Q9UI72 69 aa2.59□□□□□ -1.99
SNHG1-219ENST00000542112 MTORP42345 2549 aa2.59□□□□□ -2
SNHG1-219ENST00000542112 NDUFAF8A1L188 74 aa2.58□□□□□ -2
SNHG1-219ENST00000542112 DEFB116Q30KQ4 102 aa2.58□□□□□ -2
SNHG1-219ENST00000542112 SPINT4Q6UDR6 99 aa2.58□□□□□ -2
SNHG1-219ENST00000542112 NOP10Q9NPE3 64 aaKnown RBP2.58□□□□□ -2
SNHG1-219ENST00000542112 CELSR1Q9NYQ6 3014 aa2.58□□□□□ -2
SNHG1-219ENST00000542112 AKAP9Q99996 3911 aa2.58□□□□□ -2
SNHG1-219ENST00000542112 FAM168BA1KXE4 195 aa2.57□□□□□ -2
SNHG1-219ENST00000542112 SPRR1BP22528 89 aa2.57□□□□□ -2
SNHG1-219ENST00000542112 LINC00304Q8N9R0 145 aa2.57□□□□□ -2
SNHG1-219ENST00000542112 MRPL34Q9BQ48 92 aaKnown RBP2.57□□□□□ -2
SNHG1-219ENST00000542112 KRTAP9-8Q9BYQ0 159 aa2.57□□□□□ -2
SNHG1-219ENST00000542112 HECTD1Q9ULT8 2610 aa2.56□□□□□ -2
SNHG1-219ENST00000542112 A0A087WTM6 91 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms