RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 DNAH3Q8TD57 4116 aa9.39□□□□□ -0.91
VARS2-211ENST00000541562 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
VARS2-211ENST00000541562 KMT2AQ03164 3969 aa9.38□□□□□ -0.91
VARS2-211ENST00000541562 C16orf90A8MZG2 172 aa9.38□□□□□ -0.91
VARS2-211ENST00000541562 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.38□□□□□ -0.91
VARS2-211ENST00000541562 FRAS1Q86XX4 4008 aa9.37□□□□□ -0.91
VARS2-211ENST00000541562 H3BQ85 93 aa9.37□□□□□ -0.91
VARS2-211ENST00000541562 SPRR1AP35321 89 aa9.37□□□□□ -0.91
VARS2-211ENST00000541562 APLNQ9ULZ1 77 aa9.37□□□□□ -0.91
VARS2-211ENST00000541562 Q5XG85 94 aa9.37□□□□□ -0.91
VARS2-211ENST00000541562 OCR1Q9BZK8 76 aa9.37□□□□□ -0.91
VARS2-211ENST00000541562 STARD9Q9P2P6 4700 aa9.36□□□□□ -0.91
VARS2-211ENST00000541562 PRKDCP78527 4128 aaKnown RBP9.36□□□□□ -0.91
VARS2-211ENST00000541562 KLKP1Q107X0 134 aa9.35□□□□□ -0.91
VARS2-211ENST00000541562 SPINK6Q6UWN8 80 aa9.34□□□□□ -0.91
VARS2-211ENST00000541562 TNP2Q05952 138 aa9.34□□□□□ -0.91
VARS2-211ENST00000541562 DNHD1Q96M86 4753 aa9.34□□□□□ -0.91
VARS2-211ENST00000541562 DNAH1Q9P2D7 4330 aa9.33□□□□□ -0.92
VARS2-211ENST00000541562 LINC00208Q96KT6 92 aa9.33□□□□□ -0.92
VARS2-211ENST00000541562 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
VARS2-211ENST00000541562 SVIPQ8NHG7 77 aa9.32□□□□□ -0.92
VARS2-211ENST00000541562 NBDYA0A0U1RRE5 68 aa9.31□□□□□ -0.92
VARS2-211ENST00000541562 NDUFS5O43920 106 aa9.3□□□□□ -0.92
VARS2-211ENST00000541562 FP248Q71RG6 208 aaPredicted RBP9.3□□□□□ -0.92
VARS2-211ENST00000541562 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
VARS2-211ENST00000541562 RPS28P62857 69 aaKnown RBP9.29□□□□□ -0.92
VARS2-211ENST00000541562 PLA2G2DQ9UNK4 145 aa9.29□□□□□ -0.92
VARS2-211ENST00000541562 SERP1Q9Y6X1 66 aa9.28□□□□□ -0.92
VARS2-211ENST00000541562 LY6G6CO95867 125 aa9.28□□□□□ -0.92
VARS2-211ENST00000541562 LINC00336Q6ZUF6 198 aa9.28□□□□□ -0.92
VARS2-211ENST00000541562 BRK1Q8WUW1 75 aa9.28□□□□□ -0.92
VARS2-211ENST00000541562 IGLV5-37A0A075B6J1 123 aa9.27□□□□□ -0.93
VARS2-211ENST00000541562 PCOTHQ58A44 107 aa9.27□□□□□ -0.93
VARS2-211ENST00000541562 PSPHP1O15172 72 aa9.26□□□□□ -0.93
VARS2-211ENST00000541562 B9D2Q9BPU9 175 aa9.25□□□□□ -0.93
VARS2-211ENST00000541562 F8WDY8 70 aa9.25□□□□□ -0.93
VARS2-211ENST00000541562 C9orf163Q8N9P6 203 aa9.25□□□□□ -0.93
VARS2-211ENST00000541562 PKIGQ9Y2B9 76 aa9.25□□□□□ -0.93
VARS2-211ENST00000541562 SPRR4Q96PI1 79 aa9.24□□□□□ -0.93
VARS2-211ENST00000541562 RETNLBQ9BQ08 111 aa9.24□□□□□ -0.93
VARS2-211ENST00000541562 MOBPQ13875 183 aa9.24□□□□□ -0.93
VARS2-211ENST00000541562 C5orf47Q569G3 176 aa9.23□□□□□ -0.93
VARS2-211ENST00000541562 CASC2Q6XLA1 102 aa9.23□□□□□ -0.93
VARS2-211ENST00000541562 IGHV6-1A0A0B4J1U7 121 aa9.23□□□□□ -0.93
VARS2-211ENST00000541562 CNBPP62633 177 aaKnown RBP9.22□□□□□ -0.93
VARS2-211ENST00000541562 C1orf64Q8NEQ6 169 aa9.19□□□□□ -0.94
VARS2-211ENST00000541562 CIRBP-AS1Q8TBR5 109 aa9.18□□□□□ -0.94
VARS2-211ENST00000541562 PSORS1C2Q9UIG4 136 aa9.18□□□□□ -0.94
VARS2-211ENST00000541562 RTL8CO15255 209 aa9.18□□□□□ -0.94
VARS2-211ENST00000541562 H0Y9P7 68 aa9.17□□□□□ -0.94
VARS2-211ENST00000541562 C14orf177Q52M58 125 aa9.17□□□□□ -0.94
VARS2-211ENST00000541562 SMIM26A0A096LP01 95 aa9.17□□□□□ -0.94
VARS2-211ENST00000541562 A0A087WTM6 91 aa9.16□□□□□ -0.94
VARS2-211ENST00000541562 MP68P56378 58 aa9.15□□□□□ -0.95
VARS2-211ENST00000541562 PRR15Q8IV56 129 aa9.14□□□□□ -0.95
VARS2-211ENST00000541562 A0A087X002 238 aa9.14□□□□□ -0.95
VARS2-211ENST00000541562 NDUFC1O43677 76 aa9.14□□□□□ -0.95
VARS2-211ENST00000541562 BCE1O60756 84 aa9.14□□□□□ -0.95
VARS2-211ENST00000541562 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
VARS2-211ENST00000541562 IGLV5-52A0A0A0MRZ9 124 aa9.13□□□□□ -0.95
VARS2-211ENST00000541562 DNAH6Q9C0G6 4158 aa9.13□□□□□ -0.95
VARS2-211ENST00000541562 Q6ZRN7 208 aaPredicted RBP9.12□□□□□ -0.95
VARS2-211ENST00000541562 NUPR2A6NF83 97 aa9.12□□□□□ -0.95
VARS2-211ENST00000541562 DNAH2Q9P225 4427 aa9.11□□□□□ -0.95
VARS2-211ENST00000541562 VPS13DQ5THJ4 4388 aa9.1□□□□□ -0.95
VARS2-211ENST00000541562 DNAH11Q96DT5 4516 aa9.08□□□□□ -0.96
VARS2-211ENST00000541562 NDUFB1O75438 58 aa9.08□□□□□ -0.96
VARS2-211ENST00000541562 A8MU10 97 aa9.07□□□□□ -0.96
VARS2-211ENST00000541562 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
VARS2-211ENST00000541562 CDK2AP2O75956 126 aa9.07□□□□□ -0.96
VARS2-211ENST00000541562 SPACA4Q8TDM5 124 aa9.07□□□□□ -0.96
VARS2-211ENST00000541562 LINC00472Q9H8W2 130 aa9.07□□□□□ -0.96
VARS2-211ENST00000541562 DNAH17Q9UFH2 4485 aa9.06□□□□□ -0.96
VARS2-211ENST00000541562 A8MWP4 228 aa9.06□□□□□ -0.96
VARS2-211ENST00000541562 HECTD4Q9Y4D8 3996 aa9.06□□□□□ -0.96
VARS2-211ENST00000541562 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
VARS2-211ENST00000541562 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
VARS2-211ENST00000541562 A8MUN3 132 aa9.03□□□□□ -0.96
VARS2-211ENST00000541562 C1orf134Q5TEV5 83 aa9.03□□□□□ -0.96
VARS2-211ENST00000541562 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
VARS2-211ENST00000541562 MMP24-AS1A0A0U1RRL7 71 aa9□□□□□ -0.97
VARS2-211ENST00000541562 KRTAP29-1A8MX34 341 aaPredicted RBP8.99□□□□□ -0.97
VARS2-211ENST00000541562 ZCCHC13Q8WW36 166 aaKnown RBP8.98□□□□□ -0.97
VARS2-211ENST00000541562 IGLV8-61A0A075B6I0 122 aa8.97□□□□□ -0.97
VARS2-211ENST00000541562 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
VARS2-211ENST00000541562 WWC2-AS2Q96NR7 200 aa8.97□□□□□ -0.97
VARS2-211ENST00000541562 KRTAP13-1Q8IUC0 172 aa8.96□□□□□ -0.98
VARS2-211ENST00000541562 ATP5EP56381 51 aaPredicted RBP8.95□□□□□ -0.98
VARS2-211ENST00000541562 A0A1B0GW54 56 aa8.95□□□□□ -0.98
VARS2-211ENST00000541562 ZNF861PO60384 105 aa8.95□□□□□ -0.98
VARS2-211ENST00000541562 C8orf17Q9NRJ1 99 aa8.94□□□□□ -0.98
VARS2-211ENST00000541562 Q96NJ1 140 aa8.94□□□□□ -0.98
VARS2-211ENST00000541562 SPAG11AQ6PDA7 123 aa8.93□□□□□ -0.98
VARS2-211ENST00000541562 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
VARS2-211ENST00000541562 SPRR1BP22528 89 aa8.92□□□□□ -0.98
VARS2-211ENST00000541562 SPTSSBQ8NFR3 76 aa8.91□□□□□ -0.98
VARS2-211ENST00000541562 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.98
VARS2-211ENST00000541562 CD164Q04900 197 aa8.9□□□□□ -0.98
VARS2-211ENST00000541562 SMR3BP02814 79 aaPredicted RBP8.9□□□□□ -0.98
VARS2-211ENST00000541562 CHKB-CPT1BH3BT56 60 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms