RNA–Protein interactions for RNA: ENST00000541488.1

PRKDC-210, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-210ENST00000541488 TCRBV3S1A0A5B6 114 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 A6NIN4 97 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 ELOF1P60002 83 aaKnown RBP0.05□□□□□ -2.4
PRKDC-210ENST00000541488 MORN2Q502X0 79 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 Q5BKY6 102 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 SNX29P2Q8IUI4 249 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 ARL11Q969Q4 196 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 NPVFQ9HCQ7 196 aa0.05□□□□□ -2.4
PRKDC-210ENST00000541488 GVQW2A0A096LPI5 108 aaPredicted RBP0.04□□□□□ -2.4
PRKDC-210ENST00000541488 TRAV12-3A0A0B4J271 114 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 A8MTW9 85 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 TMEM262E9PQX1 116 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 J3QLW9 94 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 BCE1O60756 84 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 IFI6P09912 130 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 HIST1H1AQ02539 215 aaPredicted RBP0.04□□□□□ -2.4
PRKDC-210ENST00000541488 CYP2G1PQ6ZSU1 146 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 SPTSSAQ969W0 71 aa0.04□□□□□ -2.4
PRKDC-210ENST00000541488 K7EIM0 57 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 M0R2P5 195 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 GNG7O60262 68 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 LINC00694P0DN24 101 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 SCGB1A1P11684 91 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 SLC25A6P12236 298 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 SMIM11BQ8TCY0 68 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 RPRMQ9NS64 109 aa0.03□□□□□ -2.4
PRKDC-210ENST00000541488 LINC00959A0A1B0GUT2 108 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 IGLC7A0M8Q6 106 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 CPSF4LA6NMK7 179 aaKnown RBP0.02□□□□□ -2.41
PRKDC-210ENST00000541488 APOC4-APOC2K7ER74 178 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 HMGN4O00479 90 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 APOC2P02655 101 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 TSPAN19P0C672 248 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 SSBP1Q04837 148 aaKnown RBP0.02□□□□□ -2.41
PRKDC-210ENST00000541488 PIGYQ3MUY2 71 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 CLLU1Q5K131 121 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 C9orf153Q5TBE3 101 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 WFDC13Q8IUB5 93 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 PYDC1Q8WXC3 89 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 SPRR4Q96PI1 79 aa0.02□□□□□ -2.41
PRKDC-210ENST00000541488 A0A087WWC5 75 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 COX4I1P13073 169 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 NCS1P62166 190 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 RPL38P63173 70 aaKnown RBP0.01□□□□□ -2.41
PRKDC-210ENST00000541488 WT1-ASQ06250 92 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 FAM74A4Q5TZK3 123 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 IFI27L1Q96BM0 104 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 Q96NJ1 140 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 SAR1AQ9NR31 198 aa0.01□□□□□ -2.41
PRKDC-210ENST00000541488 LSM2Q9Y333 95 aaKnown RBP0.01□□□□□ -2.41
PRKDC-210ENST00000541488 CYB5AP00167 134 aa0□□□□□ -2.41
PRKDC-210ENST00000541488 DR1Q01658 176 aa0□□□□□ -2.41
PRKDC-210ENST00000541488 KLK9Q2XQG4 91 aa0□□□□□ -2.41
PRKDC-210ENST00000541488 C6orf201Q7Z4U5 140 aa0□□□□□ -2.41
PRKDC-210ENST00000541488 TMEM242Q9NWH2 141 aa0□□□□□ -2.41
PRKDC-210ENST00000541488 CFAP126Q5VTH2 177 aa-0.01□□□□□ -2.41
PRKDC-210ENST00000541488 AKAP14Q86UN6 197 aa-0.01□□□□□ -2.41
PRKDC-210ENST00000541488 FAM213BQ8TBF2 198 aa-0.01□□□□□ -2.41
PRKDC-210ENST00000541488 CGREF1Q99674 301 aa-0.01□□□□□ -2.41
PRKDC-210ENST00000541488 SCP2D1Q9UJQ7 156 aa-0.01□□□□□ -2.41
PRKDC-210ENST00000541488 CRYM-AS1A6NIL9 109 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 F8WEM9 126 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 SPRR1BP22528 89 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 RBP2P50120 134 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 NPC2P61916 151 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 SPAG11BQ08648 103 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 H1FX-AS1Q4G0G2 97 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 SPANXN1Q5VSR9 72 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 COX7B2Q8TF08 81 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 GSKIPQ9P0R6 139 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 C6orf48Q9UBA6 75 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 IER3IP1Q9Y5U9 82 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 V9GYS6 101 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 V9GYV3 84 aa-0.02□□□□□ -2.41
PRKDC-210ENST00000541488 MIF4GDA9UHW6 222 aaKnown RBP-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 NCR2O95944 276 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 NMBP08949 121 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 HMGN3Q15651 99 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 LINC01545Q5VT33 79 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 SSBP3-AS1Q7Z2R9 100 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 C20orf197Q8N268 126 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 LSM10Q969L4 123 aaKnown RBP-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 NAA60Q9H7X0 242 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 SCN3BQ9NY72 215 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 CRIPTQ9P021 101 aa-0.03□□□□□ -2.41
PRKDC-210ENST00000541488 TRBV25-1A0A075B6N4 114 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 J3QR89 54 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 IGLC6P0CF74 106 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 IGLC1P0CG04 106 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 TRAPPC2P0DI81 140 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 TRAPPC2BP0DI82 140 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 C1orf54Q8WWF1 131 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 AQP10Q96PS8 301 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 ABRACLQ9P1F3 81 aa-0.04□□□□□ -2.42
PRKDC-210ENST00000541488 TRBV7-3A0A075B6L6 115 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 NDUFA1O15239 70 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 LINC00032P0C843 101 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 ACYP2P14621 99 aa-0.05□□□□□ -2.42
PRKDC-210ENST00000541488 PKIAP61925 76 aa-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms