RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TAX1BP3O14907 124 aa7.6□□□□□ -1.19
SMARCA4-206ENST00000538456 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
SMARCA4-206ENST00000538456 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
SMARCA4-206ENST00000538456 CFC1P0CG37 223 aa7.59□□□□□ -1.19
SMARCA4-206ENST00000538456 K7ERJ3 54 aa7.58□□□□□ -1.2
SMARCA4-206ENST00000538456 HRCT1Q6UXD1 115 aa7.58□□□□□ -1.2
SMARCA4-206ENST00000538456 ST20-AS1Q8NBB2 130 aa7.57□□□□□ -1.2
SMARCA4-206ENST00000538456 RAB37Q96AX2 223 aa7.57□□□□□ -1.2
SMARCA4-206ENST00000538456 PRO1854Q9UHT4 67 aa7.56□□□□□ -1.2
SMARCA4-206ENST00000538456 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
SMARCA4-206ENST00000538456 C9orf118A6NHY6 69 aa7.55□□□□□ -1.2
SMARCA4-206ENST00000538456 NDUFC2O95298 119 aa7.55□□□□□ -1.2
SMARCA4-206ENST00000538456 S100A7L2Q5SY68 101 aa7.55□□□□□ -1.2
SMARCA4-206ENST00000538456 LIMD2Q9BT23 127 aa7.55□□□□□ -1.2
SMARCA4-206ENST00000538456 FLGP20930 4061 aaPredicted RBP7.54□□□□□ -1.2
SMARCA4-206ENST00000538456 TRAV23DV6A0A075B6W5 121 aa7.53□□□□□ -1.2
SMARCA4-206ENST00000538456 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
SMARCA4-206ENST00000538456 TRAV13-2A0A0B4J235 113 aa7.52□□□□□ -1.21
SMARCA4-206ENST00000538456 A0A1B0GV90 55 aa7.52□□□□□ -1.21
SMARCA4-206ENST00000538456 H3BUT2 72 aa7.52□□□□□ -1.21
SMARCA4-206ENST00000538456 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
SMARCA4-206ENST00000538456 ZNF73O43830 326 aaPredicted RBP7.51□□□□□ -1.21
SMARCA4-206ENST00000538456 A0A1W2PPM0 123 aa7.5□□□□□ -1.21
SMARCA4-206ENST00000538456 NAA38Q9BRA0 125 aaKnown RBP7.49□□□□□ -1.21
SMARCA4-206ENST00000538456 Q1RN00 199 aa7.48□□□□□ -1.21
SMARCA4-206ENST00000538456 LYRM7Q5U5X0 104 aa7.48□□□□□ -1.21
SMARCA4-206ENST00000538456 KRTAP3-3Q9BYR6 98 aa7.48□□□□□ -1.21
SMARCA4-206ENST00000538456 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
SMARCA4-206ENST00000538456 KRTAP9-7A8MTY7 169 aa7.47□□□□□ -1.21
SMARCA4-206ENST00000538456 H7C2G1 150 aa7.47□□□□□ -1.21
SMARCA4-206ENST00000538456 FABP2P12104 132 aa7.47□□□□□ -1.21
SMARCA4-206ENST00000538456 VAMP3Q15836 100 aa7.46□□□□□ -1.22
SMARCA4-206ENST00000538456 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
SMARCA4-206ENST00000538456 PSMB2P49721 201 aa7.45□□□□□ -1.22
SMARCA4-206ENST00000538456 OR13C6PQ8NH95 151 aa7.45□□□□□ -1.22
SMARCA4-206ENST00000538456 TRIAP1O43715 76 aa7.44□□□□□ -1.22
SMARCA4-206ENST00000538456 SPRR1BP22528 89 aa7.44□□□□□ -1.22
SMARCA4-206ENST00000538456 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
SMARCA4-206ENST00000538456 LAMTOR3Q9UHA4 124 aa7.44□□□□□ -1.22
SMARCA4-206ENST00000538456 SPCS1Q9Y6A9 102 aa7.44□□□□□ -1.22
SMARCA4-206ENST00000538456 K7EP34 96 aa7.43□□□□□ -1.22
SMARCA4-206ENST00000538456 COX6CP09669 75 aa7.43□□□□□ -1.22
SMARCA4-206ENST00000538456 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
SMARCA4-206ENST00000538456 SMIM11BQ8TCY0 68 aa7.42□□□□□ -1.22
SMARCA4-206ENST00000538456 USH2AO75445 5202 aa7.41□□□□□ -1.22
SMARCA4-206ENST00000538456 TRBV20-1A0A075B6N2 111 aa7.41□□□□□ -1.22
SMARCA4-206ENST00000538456 SCGB1C2P0DMR2 95 aa7.41□□□□□ -1.22
SMARCA4-206ENST00000538456 DHRS4-AS1Q9P1J3 65 aa7.41□□□□□ -1.22
SMARCA4-206ENST00000538456 CBY1Q9Y3M2 126 aa7.41□□□□□ -1.22
SMARCA4-206ENST00000538456 SSPOA2VEC9 5147 aa7.41□□□□□ -1.22
SMARCA4-206ENST00000538456 CD164Q04900 197 aa7.4□□□□□ -1.22
SMARCA4-206ENST00000538456 UBE2V1Q13404 147 aa7.4□□□□□ -1.22
SMARCA4-206ENST00000538456 C1orf195Q5TG92 126 aa7.4□□□□□ -1.22
SMARCA4-206ENST00000538456 DEFB105AQ8NG35 78 aa7.4□□□□□ -1.22
SMARCA4-206ENST00000538456 TCL1BO95988 128 aa7.39□□□□□ -1.23
SMARCA4-206ENST00000538456 A0A0G2JQZ4 141 aa7.37□□□□□ -1.23
SMARCA4-206ENST00000538456 H0YGX0 51 aa7.37□□□□□ -1.23
SMARCA4-206ENST00000538456 ATXN8Q156A1 80 aa7.37□□□□□ -1.23
SMARCA4-206ENST00000538456 Q6Q795 121 aa7.37□□□□□ -1.23
SMARCA4-206ENST00000538456 LST1O00453 97 aa7.36□□□□□ -1.23
SMARCA4-206ENST00000538456 C6orf99Q4VX62 202 aa7.36□□□□□ -1.23
SMARCA4-206ENST00000538456 H3BMG7 143 aa7.35□□□□□ -1.23
SMARCA4-206ENST00000538456 Q5XG85 94 aa7.35□□□□□ -1.23
SMARCA4-206ENST00000538456 CLEC2BQ92478 149 aa7.35□□□□□ -1.23
SMARCA4-206ENST00000538456 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
SMARCA4-206ENST00000538456 COX7BP24311 80 aa7.34□□□□□ -1.23
SMARCA4-206ENST00000538456 ELOF1P60002 83 aaKnown RBP7.34□□□□□ -1.23
SMARCA4-206ENST00000538456 SMIM29Q86T20 159 aa7.34□□□□□ -1.23
SMARCA4-206ENST00000538456 TEX49A0A1B0GTD5 131 aa7.33□□□□□ -1.24
SMARCA4-206ENST00000538456 A0A1B0GX51 115 aa7.33□□□□□ -1.24
SMARCA4-206ENST00000538456 TRACP01848 142 aa7.33□□□□□ -1.24
SMARCA4-206ENST00000538456 FAM218AQ96MZ4 157 aa7.32□□□□□ -1.24
SMARCA4-206ENST00000538456 F8W1H4 67 aa7.3□□□□□ -1.24
SMARCA4-206ENST00000538456 PRO0461Q9UI25 63 aa7.3□□□□□ -1.24
SMARCA4-206ENST00000538456 FCGBPQ9Y6R7 5405 aaPredicted RBP7.29□□□□□ -1.24
SMARCA4-206ENST00000538456 C9JAW5 83 aa7.29□□□□□ -1.24
SMARCA4-206ENST00000538456 LINC00575Q6W349 94 aa7.29□□□□□ -1.24
SMARCA4-206ENST00000538456 SNCGO76070 127 aa7.28□□□□□ -1.24
SMARCA4-206ENST00000538456 DNAL4O96015 105 aa7.28□□□□□ -1.24
SMARCA4-206ENST00000538456 H3BT86 120 aa7.27□□□□□ -1.25
SMARCA4-206ENST00000538456 MTURNQ8N3F0 131 aa7.27□□□□□ -1.25
SMARCA4-206ENST00000538456 SMCPP49901 116 aaPredicted RBP7.26□□□□□ -1.25
SMARCA4-206ENST00000538456 hADV29S1A0JD25 119 aa7.25□□□□□ -1.25
SMARCA4-206ENST00000538456 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
SMARCA4-206ENST00000538456 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
SMARCA4-206ENST00000538456 IGLV5-48A0A075B6I7 105 aa7.24□□□□□ -1.25
SMARCA4-206ENST00000538456 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
SMARCA4-206ENST00000538456 ANKRD29Q8N6D5 301 aa7.24□□□□□ -1.25
SMARCA4-206ENST00000538456 OBSCN-AS1Q96MR7 158 aa7.23□□□□□ -1.25
SMARCA4-206ENST00000538456 MACF1Q9UPN3 7388 aaKnown RBP7.22□□□□□ -1.25
SMARCA4-206ENST00000538456 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.22□□□□□ -1.25
SMARCA4-206ENST00000538456 ORMDL1Q9P0S3 153 aa7.22□□□□□ -1.25
SMARCA4-206ENST00000538456 BAALC-AS2P0C853 105 aa7.21□□□□□ -1.26
SMARCA4-206ENST00000538456 H3BQ85 93 aa7.2□□□□□ -1.26
SMARCA4-206ENST00000538456 GHRHP01286 108 aa7.2□□□□□ -1.26
SMARCA4-206ENST00000538456 OCIAD2Q56VL3 154 aa7.2□□□□□ -1.26
SMARCA4-206ENST00000538456 Q6ZQY7 126 aa7.2□□□□□ -1.26
SMARCA4-206ENST00000538456 Q75L30 129 aa7.2□□□□□ -1.26
SMARCA4-206ENST00000538456 TEN1Q86WV5 123 aa7.2□□□□□ -1.26
SMARCA4-206ENST00000538456 ETDBQ3ZM63 59 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms