RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 Q5XG85 94 aa10.63□□□□□ -0.71
TNFRSF1B-204ENST00000536782 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
TNFRSF1B-204ENST00000536782 C14orf144Q96I85 54 aa10.62□□□□□ -0.71
TNFRSF1B-204ENST00000536782 HIGD1BQ9P298 99 aa10.62□□□□□ -0.71
TNFRSF1B-204ENST00000536782 VAMP3Q15836 100 aa10.6□□□□□ -0.71
TNFRSF1B-204ENST00000536782 IGLV5-48A0A075B6I7 105 aa10.59□□□□□ -0.71
TNFRSF1B-204ENST00000536782 CFC1BP0CG36 223 aa10.59□□□□□ -0.71
TNFRSF1B-204ENST00000536782 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
TNFRSF1B-204ENST00000536782 TMA7Q9Y2S6 64 aaKnown RBP10.58□□□□□ -0.72
TNFRSF1B-204ENST00000536782 A0A0G2JQZ4 141 aa10.56□□□□□ -0.72
TNFRSF1B-204ENST00000536782 C12orf57Q99622 126 aa10.56□□□□□ -0.72
TNFRSF1B-204ENST00000536782 C2orf91Q6ZV80 131 aa10.55□□□□□ -0.72
TNFRSF1B-204ENST00000536782 LINC00575Q6W349 94 aa10.54□□□□□ -0.72
TNFRSF1B-204ENST00000536782 RPL37P61927 97 aaKnown RBP10.53□□□□□ -0.72
TNFRSF1B-204ENST00000536782 PYY3Q5JQD4 70 aa10.53□□□□□ -0.72
TNFRSF1B-204ENST00000536782 BVES-AS1Q5T3Y7 98 aa10.52□□□□□ -0.73
TNFRSF1B-204ENST00000536782 A0A0B4J2C4 111 aa10.51□□□□□ -0.73
TNFRSF1B-204ENST00000536782 CFC1P0CG37 223 aa10.51□□□□□ -0.73
TNFRSF1B-204ENST00000536782 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
TNFRSF1B-204ENST00000536782 TCL1BO95988 128 aa10.5□□□□□ -0.73
TNFRSF1B-204ENST00000536782 RAB37Q96AX2 223 aa10.5□□□□□ -0.73
TNFRSF1B-204ENST00000536782 LORP23490 312 aaPredicted RBP10.49□□□□□ -0.73
TNFRSF1B-204ENST00000536782 CEND1Q8N111 149 aa10.48□□□□□ -0.73
TNFRSF1B-204ENST00000536782 TMEM238LA0A1B0GVL6 79 aa10.47□□□□□ -0.73
TNFRSF1B-204ENST00000536782 A6NJY4 79 aa10.47□□□□□ -0.73
TNFRSF1B-204ENST00000536782 KRTAP10-6P60371 365 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF1B-204ENST00000536782 Q6ZQY7 126 aa10.47□□□□□ -0.73
TNFRSF1B-204ENST00000536782 FLGP20930 4061 aaPredicted RBP10.47□□□□□ -0.73
TNFRSF1B-204ENST00000536782 F8WEM9 126 aa10.46□□□□□ -0.73
TNFRSF1B-204ENST00000536782 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.46□□□□□ -0.73
TNFRSF1B-204ENST00000536782 M0R2T5 61 aa10.45□□□□□ -0.74
TNFRSF1B-204ENST00000536782 COX6B2Q6YFQ2 88 aa10.45□□□□□ -0.74
TNFRSF1B-204ENST00000536782 PPDPFLQ8WWR9 84 aa10.43□□□□□ -0.74
TNFRSF1B-204ENST00000536782 H0YGX0 51 aa10.41□□□□□ -0.74
TNFRSF1B-204ENST00000536782 FXYD2P54710 66 aa10.41□□□□□ -0.74
TNFRSF1B-204ENST00000536782 PRO1854Q9UHT4 67 aa10.41□□□□□ -0.74
TNFRSF1B-204ENST00000536782 HSD52Q0P140 79 aa10.4□□□□□ -0.74
TNFRSF1B-204ENST00000536782 SNCGO76070 127 aa10.39□□□□□ -0.75
TNFRSF1B-204ENST00000536782 Q6JHZ5 121 aa10.39□□□□□ -0.75
TNFRSF1B-204ENST00000536782 UQCR10Q9UDW1 63 aa10.38□□□□□ -0.75
TNFRSF1B-204ENST00000536782 OCIAD2Q56VL3 154 aa10.37□□□□□ -0.75
TNFRSF1B-204ENST00000536782 CLEC2BQ92478 149 aa10.36□□□□□ -0.75
TNFRSF1B-204ENST00000536782 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
TNFRSF1B-204ENST00000536782 A0A1B0GX51 115 aa10.34□□□□□ -0.75
TNFRSF1B-204ENST00000536782 IGFL1Q6UW32 110 aa10.34□□□□□ -0.75
TNFRSF1B-204ENST00000536782 FAM218AQ96MZ4 157 aa10.33□□□□□ -0.76
TNFRSF1B-204ENST00000536782 SNHG12Q9BXW3 62 aa10.33□□□□□ -0.76
TNFRSF1B-204ENST00000536782 GHRHP01286 108 aa10.3□□□□□ -0.76
TNFRSF1B-204ENST00000536782 ATP11AUNQ6ZP68 121 aa10.3□□□□□ -0.76
TNFRSF1B-204ENST00000536782 OBSCN-AS1Q96MR7 158 aa10.3□□□□□ -0.76
TNFRSF1B-204ENST00000536782 TRIAP1O43715 76 aa10.29□□□□□ -0.76
TNFRSF1B-204ENST00000536782 Q75L30 129 aa10.28□□□□□ -0.76
TNFRSF1B-204ENST00000536782 K7ERJ3 54 aa10.26□□□□□ -0.77
TNFRSF1B-204ENST00000536782 Q6Q795 121 aa10.26□□□□□ -0.77
TNFRSF1B-204ENST00000536782 SMIM6P0DI80 62 aa10.25□□□□□ -0.77
TNFRSF1B-204ENST00000536782 LST1O00453 97 aa10.24□□□□□ -0.77
TNFRSF1B-204ENST00000536782 H3BUT2 72 aa10.23□□□□□ -0.77
TNFRSF1B-204ENST00000536782 COX6CP09669 75 aa10.23□□□□□ -0.77
TNFRSF1B-204ENST00000536782 PSMB2P49721 201 aa10.23□□□□□ -0.77
TNFRSF1B-204ENST00000536782 NDUFV3P56181 108 aaKnown RBP10.23□□□□□ -0.77
TNFRSF1B-204ENST00000536782 H3BQ85 93 aa10.2□□□□□ -0.78
TNFRSF1B-204ENST00000536782 DNAL4O96015 105 aa10.2□□□□□ -0.78
TNFRSF1B-204ENST00000536782 Q96NJ1 140 aa10.2□□□□□ -0.78
TNFRSF1B-204ENST00000536782 FABP2P12104 132 aa10.18□□□□□ -0.78
TNFRSF1B-204ENST00000536782 SS18L2Q9UHA2 77 aa10.18□□□□□ -0.78
TNFRSF1B-204ENST00000536782 ORMDL1Q9P0S3 153 aa10.17□□□□□ -0.78
TNFRSF1B-204ENST00000536782 H3BMG7 143 aa10.16□□□□□ -0.78
TNFRSF1B-204ENST00000536782 M0R143 59 aa10.15□□□□□ -0.78
TNFRSF1B-204ENST00000536782 TEN1Q86WV5 123 aa10.15□□□□□ -0.78
TNFRSF1B-204ENST00000536782 TSTD3H0UI37 97 aa10.13□□□□□ -0.79
TNFRSF1B-204ENST00000536782 TMEM256-PLSCR3K7ERE1 68 aa10.13□□□□□ -0.79
TNFRSF1B-204ENST00000536782 C20orf166-AS1Q96NR2 134 aa10.12□□□□□ -0.79
TNFRSF1B-204ENST00000536782 TRACP01848 142 aa10.11□□□□□ -0.79
TNFRSF1B-204ENST00000536782 SCGB1C2P0DMR2 95 aa10.1□□□□□ -0.79
TNFRSF1B-204ENST00000536782 SSPOA2VEC9 5147 aa10.09□□□□□ -0.79
TNFRSF1B-204ENST00000536782 A8MUU9 505 aa10.09□□□□□ -0.79
TNFRSF1B-204ENST00000536782 USH2AO75445 5202 aa10.08□□□□□ -0.8
TNFRSF1B-204ENST00000536782 TRBV20-1A0A075B6N2 111 aa10.07□□□□□ -0.8
TNFRSF1B-204ENST00000536782 A0A087WSZ3 146 aa10.07□□□□□ -0.8
TNFRSF1B-204ENST00000536782 UBE2V1Q13404 147 aa10.07□□□□□ -0.8
TNFRSF1B-204ENST00000536782 LOC105371267A0A1B0GV96 52 aa10.06□□□□□ -0.8
TNFRSF1B-204ENST00000536782 ANKRD29Q8N6D5 301 aa10.05□□□□□ -0.8
TNFRSF1B-204ENST00000536782 A0A1W2PNM2 257 aa10.04□□□□□ -0.8
TNFRSF1B-204ENST00000536782 TRBV7-4A0A0J9YYF1 115 aa10.02□□□□□ -0.81
TNFRSF1B-204ENST00000536782 KRTAP9-8Q9BYQ0 159 aa10.01□□□□□ -0.81
TNFRSF1B-204ENST00000536782 KRTAP9-1A8MXZ3 250 aaPredicted RBP10□□□□□ -0.81
TNFRSF1B-204ENST00000536782 DSCR10P59022 87 aa10□□□□□ -0.81
TNFRSF1B-204ENST00000536782 A0A1B0GV72 72 aa9.99□□□□□ -0.81
TNFRSF1B-204ENST00000536782 SIGMAR1Q99720 223 aa9.98□□□□□ -0.81
TNFRSF1B-204ENST00000536782 ATXN8Q156A1 80 aa9.97□□□□□ -0.81
TNFRSF1B-204ENST00000536782 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
TNFRSF1B-204ENST00000536782 KRTAP9-7A8MTY7 169 aa9.96□□□□□ -0.82
TNFRSF1B-204ENST00000536782 CCKP06307 115 aa9.95□□□□□ -0.82
TNFRSF1B-204ENST00000536782 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
TNFRSF1B-204ENST00000536782 RBM3P98179 157 aaKnown RBP9.95□□□□□ -0.82
TNFRSF1B-204ENST00000536782 LINC00313P59037 77 aa9.94□□□□□ -0.82
TNFRSF1B-204ENST00000536782 DSCR8Q96T75 97 aa9.93□□□□□ -0.82
TNFRSF1B-204ENST00000536782 NAA38Q9BRA0 125 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1B-204ENST00000536782 BATFQ16520 125 aa9.92□□□□□ -0.82
TNFRSF1B-204ENST00000536782 FAM236DA0A1B0GTK5 79 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms