RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 NCR3O14931 201 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 HSBP1O75506 76 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 S100A2P29034 98 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 SPRR1AP35321 89 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 S100A12P80511 92 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 MEIG1Q5JSS6 88 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 FAM19A2Q8N3H0 131 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 SMCR5Q8TEV8 140 aa3.55□□□□□ -1.84
CSDE1-213ENST00000530784 CHTOPQ9Y3Y2 248 aaKnown RBP3.55□□□□□ -1.84
CSDE1-213ENST00000530784 TMEM223A0PJW6 202 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 SMIM6P0DI80 62 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 SMIM13P0DJ93 91 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 FABP4P15090 132 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 Q5W150 140 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 KCNQ1DNQ9H478 68 aa3.54□□□□□ -1.84
CSDE1-213ENST00000530784 TRBV10-3A0A0K0K1G6 114 aa3.53□□□□□ -1.84
CSDE1-213ENST00000530784 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
CSDE1-213ENST00000530784 JOSD1Q15040 202 aaPredicted RBP3.53□□□□□ -1.84
CSDE1-213ENST00000530784 TRAV12-1A0A0B4J245 112 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 LINC00587B1AMM8 73 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 SLC25A20O43772 301 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 AKR1D1P51857 326 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 PYY3Q5JQD4 70 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 MAP1LC3CQ9BXW4 147 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 KRTAP4-1Q9BYQ7 146 aa3.52□□□□□ -1.85
CSDE1-213ENST00000530784 LEPROTL1O95214 131 aa3.51□□□□□ -1.85
CSDE1-213ENST00000530784 SSBP3-AS1Q7Z2R9 100 aa3.51□□□□□ -1.85
CSDE1-213ENST00000530784 IFI27L1Q96BM0 104 aa3.51□□□□□ -1.85
CSDE1-213ENST00000530784 MYMXA0A1B0GTQ4 84 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 ERC2-IT1O76042 136 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 C3orf79P0CE67 100 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 DDTP30046 118 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 C9orf153Q5TBE3 101 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 Q6ZRX8 168 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 C12orf57Q99622 126 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 HSPB8Q9UJY1 196 aa3.5□□□□□ -1.85
CSDE1-213ENST00000530784 TRBV10-2A0A0K0K1G8 114 aa3.49□□□□□ -1.85
CSDE1-213ENST00000530784 SYS1-DBNDD2H3BUS1 97 aa3.49□□□□□ -1.85
CSDE1-213ENST00000530784 Q9BRP9 147 aa3.49□□□□□ -1.85
CSDE1-213ENST00000530784 MIEN1Q9BRT3 115 aa3.49□□□□□ -1.85
CSDE1-213ENST00000530784 SPANXB1Q9NS25 103 aaPredicted RBP3.49□□□□□ -1.85
CSDE1-213ENST00000530784 CRCT1Q9UGL9 99 aa3.49□□□□□ -1.85
CSDE1-213ENST00000530784 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
CSDE1-213ENST00000530784 TRAV23DV6A0A075B6W5 121 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 LOC107984156A0A0G2JMH3 177 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 H0Y8G0 127 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 TSPEAR-AS2P59090 65 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 KRTDAPP60985 99 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 S100A7L2Q5SY68 101 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 LINC01545Q5VT33 79 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 ARL17AQ8IVW1 177 aa3.48□□□□□ -1.85
CSDE1-213ENST00000530784 C20orf202A1L168 122 aa3.47□□□□□ -1.85
CSDE1-213ENST00000530784 LEPROTO15243 131 aa3.47□□□□□ -1.85
CSDE1-213ENST00000530784 IGLV6-57P01721 117 aa3.47□□□□□ -1.85
CSDE1-213ENST00000530784 LIMD2Q9BT23 127 aa3.47□□□□□ -1.85
CSDE1-213ENST00000530784 J3QQQ9 107 aa3.46□□□□□ -1.86
CSDE1-213ENST00000530784 ZNF73O43830 326 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-213ENST00000530784 NDUFC2O95298 119 aa3.46□□□□□ -1.86
CSDE1-213ENST00000530784 PLNP26678 52 aa3.46□□□□□ -1.86
CSDE1-213ENST00000530784 SLC25A34Q6PIV7 304 aa3.46□□□□□ -1.86
CSDE1-213ENST00000530784 LGALS3P17931 250 aaKnown RBP3.45□□□□□ -1.86
CSDE1-213ENST00000530784 HINT1P49773 126 aaPredicted RBP3.45□□□□□ -1.86
CSDE1-213ENST00000530784 MT1HP80294 61 aa3.45□□□□□ -1.86
CSDE1-213ENST00000530784 PCOTHQ58A44 107 aa3.45□□□□□ -1.86
CSDE1-213ENST00000530784 KRTAP5-7Q6L8G8 165 aa3.45□□□□□ -1.86
CSDE1-213ENST00000530784 ST20-AS1Q8NBB2 130 aa3.45□□□□□ -1.86
CSDE1-213ENST00000530784 CBY1Q9Y3M2 126 aa3.45□□□□□ -1.86
CSDE1-213ENST00000530784 C9orf92A6NGG3 77 aa3.44□□□□□ -1.86
CSDE1-213ENST00000530784 DPM2O94777 84 aa3.44□□□□□ -1.86
CSDE1-213ENST00000530784 NPC2P61916 151 aa3.44□□□□□ -1.86
CSDE1-213ENST00000530784 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
CSDE1-213ENST00000530784 HRCT1Q6UXD1 115 aa3.44□□□□□ -1.86
CSDE1-213ENST00000530784 VAMP8Q9BV40 100 aa3.44□□□□□ -1.86
CSDE1-213ENST00000530784 TSTD3H0UI37 97 aa3.43□□□□□ -1.86
CSDE1-213ENST00000530784 IGKCP01834 107 aa3.43□□□□□ -1.86
CSDE1-213ENST00000530784 SPRR1BP22528 89 aa3.43□□□□□ -1.86
CSDE1-213ENST00000530784 SOSTDC1Q6X4U4 206 aa3.43□□□□□ -1.86
CSDE1-213ENST00000530784 PMCHL2Q9BQD1 86 aa3.43□□□□□ -1.86
CSDE1-213ENST00000530784 SPATA45Q537H7 98 aa3.42□□□□□ -1.86
CSDE1-213ENST00000530784 ATOH7Q8N100 152 aa3.42□□□□□ -1.86
CSDE1-213ENST00000530784 LAMTOR3Q9UHA4 124 aa3.42□□□□□ -1.86
CSDE1-213ENST00000530784 HSBP1L1C9JCN9 74 aa3.41□□□□□ -1.86
CSDE1-213ENST00000530784 DLEU1O43261 78 aa3.41□□□□□ -1.86
CSDE1-213ENST00000530784 OR13C6PQ8NH95 151 aa3.41□□□□□ -1.86
CSDE1-213ENST00000530784 SPANXCQ9NY87 97 aa3.41□□□□□ -1.86
CSDE1-213ENST00000530784 BPY2O14599 106 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 COX8AP10176 69 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 CD164Q04900 197 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 LINC00308Q8TCZ7 52 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 SPANXDQ9BXN6 97 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 PRO1933Q9H354 126 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 UQCR10Q9UDW1 63 aa3.4□□□□□ -1.87
CSDE1-213ENST00000530784 H7C2G1 150 aa3.39□□□□□ -1.87
CSDE1-213ENST00000530784 M0R2T5 61 aa3.39□□□□□ -1.87
CSDE1-213ENST00000530784 COX7BP24311 80 aa3.39□□□□□ -1.87
CSDE1-213ENST00000530784 ELOF1P60002 83 aaKnown RBP3.39□□□□□ -1.87
CSDE1-213ENST00000530784 TAL2Q16559 108 aa3.39□□□□□ -1.87
CSDE1-213ENST00000530784 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
CSDE1-213ENST00000530784 DEFB105AQ8NG35 78 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 167.2 ms