RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	C16orf90	A8MZG2	172 aa		9.26	□□□□□ -0.93
NR1H3-231	ENST00000529540		A0A0U1RQV1	116 aa		9.25	□□□□□ -0.93
NR1H3-231	ENST00000529540	PLA2G2D	Q9UNK4	145 aa		9.25	□□□□□ -0.93
NR1H3-231	ENST00000529540	DNAH17	Q9UFH2	4485 aa		9.24	□□□□□ -0.93
NR1H3-231	ENST00000529540	KRTAP10-2	P60368	255 aa		9.23	□□□□□ -0.93
NR1H3-231	ENST00000529540	FP248	Q71RG6	208 aa	Predicted RBP	9.23	□□□□□ -0.93
NR1H3-231	ENST00000529540		Q8N377	158 aa		9.23	□□□□□ -0.93
NR1H3-231	ENST00000529540		A0A1B0GVY2	172 aa		9.23	□□□□□ -0.93
NR1H3-231	ENST00000529540	C7orf33	Q8WU49	177 aa		9.23	□□□□□ -0.93
NR1H3-231	ENST00000529540	DHRS4-AS1	Q9P1J3	65 aa		9.23	□□□□□ -0.93
NR1H3-231	ENST00000529540	FRAS1	Q86XX4	4008 aa		9.22	□□□□□ -0.93
NR1H3-231	ENST00000529540	PRY	O14603	147 aa		9.22	□□□□□ -0.93
NR1H3-231	ENST00000529540		Q8N9L7	120 aa		9.22	□□□□□ -0.93
NR1H3-231	ENST00000529540	NKAPP1	Q8N9T2	125 aa		9.22	□□□□□ -0.93
NR1H3-231	ENST00000529540	IGLV5-37	A0A075B6J1	123 aa		9.21	□□□□□ -0.93
NR1H3-231	ENST00000529540	SERTAD4-AS1	Q5TG53	156 aa		9.2	□□□□□ -0.94
NR1H3-231	ENST00000529540		A0A096LNI7	61 aa		9.19	□□□□□ -0.94
NR1H3-231	ENST00000529540	FUS	P35637	526 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
NR1H3-231	ENST00000529540	IGKV2-24	A0A0C4DH68	120 aa		9.18	□□□□□ -0.94
NR1H3-231	ENST00000529540	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	9.17	□□□□□ -0.94
NR1H3-231	ENST00000529540	SPRR1A	P35321	89 aa		9.17	□□□□□ -0.94
NR1H3-231	ENST00000529540		Q6ZRX8	168 aa		9.17	□□□□□ -0.94
NR1H3-231	ENST00000529540	PRO0628	Q9UI54	55 aa		9.17	□□□□□ -0.94
NR1H3-231	ENST00000529540	FAT2	Q9NYQ8	4349 aa		9.16	□□□□□ -0.94
NR1H3-231	ENST00000529540		A0A1W2PNM2	257 aa		9.16	□□□□□ -0.94
NR1H3-231	ENST00000529540	SPACA4	Q8TDM5	124 aa		9.16	□□□□□ -0.94
NR1H3-231	ENST00000529540		Q8NBF4	154 aa		9.15	□□□□□ -0.94
NR1H3-231	ENST00000529540	DEFB105A	Q8NG35	78 aa		9.15	□□□□□ -0.94
NR1H3-231	ENST00000529540	SPRR4	Q96PI1	79 aa		9.14	□□□□□ -0.95
NR1H3-231	ENST00000529540	IGLV1-50	A0A075B6I6	118 aa		9.13	□□□□□ -0.95
NR1H3-231	ENST00000529540		Q9BRP9	147 aa		9.13	□□□□□ -0.95
NR1H3-231	ENST00000529540	C1orf137	Q5JT78	98 aa		9.13	□□□□□ -0.95
NR1H3-231	ENST00000529540		Q6ZSA8	131 aa		9.13	□□□□□ -0.95
NR1H3-231	ENST00000529540	ETDC	A0A1B0GVM5	59 aa		9.12	□□□□□ -0.95
NR1H3-231	ENST00000529540	CHTF8	P0CG12	524 aa		9.12	□□□□□ -0.95
NR1H3-231	ENST00000529540	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	9.12	□□□□□ -0.95
NR1H3-231	ENST00000529540	RYR3	Q15413	4870 aa		9.12	□□□□□ -0.95
NR1H3-231	ENST00000529540	KRTAP10-1	P60331	282 aa		9.11	□□□□□ -0.95
NR1H3-231	ENST00000529540	SMIM29	Q86T20	159 aa		9.11	□□□□□ -0.95
NR1H3-231	ENST00000529540	HIGD2A	Q9BW72	106 aa		9.11	□□□□□ -0.95
NR1H3-231	ENST00000529540	PLAC8	Q9NZF1	115 aa		9.1	□□□□□ -0.95
NR1H3-231	ENST00000529540	PKD1	P98161	4303 aa		9.08	□□□□□ -0.96
NR1H3-231	ENST00000529540	MRPL55	Q7Z7F7	128 aa	Known RBP	9.08	□□□□□ -0.96
NR1H3-231	ENST00000529540	FAM168B	A1KXE4	195 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	DSCR10	P59022	87 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	FAM229B	Q4G0N7	80 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	ZCCHC13	Q8WW36	166 aa	Known RBP	9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	FAM30A	Q9NZY2	134 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	DNAH11	Q96DT5	4516 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540		A0A1W2PNN7	141 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	RPL37AP8	A6NKH3	93 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	PANO1	I0J062	215 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	ST20-AS1	Q8NBB2	130 aa		9.07	□□□□□ -0.96
NR1H3-231	ENST00000529540	HECTD4	Q9Y4D8	3996 aa		9.06	□□□□□ -0.96
NR1H3-231	ENST00000529540	KRTAP7-1	Q8IUC3	87 aa		9.06	□□□□□ -0.96
NR1H3-231	ENST00000529540	CIRBP-AS1	Q8TBR5	109 aa		9.04	□□□□□ -0.96
NR1H3-231	ENST00000529540	hDV103S1	A0JD37	113 aa		9.03	□□□□□ -0.96
NR1H3-231	ENST00000529540	UBE2B	P63146	152 aa		9.02	□□□□□ -0.97
NR1H3-231	ENST00000529540	DNAH5	Q8TE73	4624 aa		9.01	□□□□□ -0.97
NR1H3-231	ENST00000529540		K7EQZ3	153 aa		9.01	□□□□□ -0.97
NR1H3-231	ENST00000529540	HCG22	E2RYF7	251 aa		9	□□□□□ -0.97
NR1H3-231	ENST00000529540	REG3G	Q6UW15	175 aa		9	□□□□□ -0.97
NR1H3-231	ENST00000529540	PHF5A	Q7RTV0	110 aa	Known RBP	9	□□□□□ -0.97
NR1H3-231	ENST00000529540	IGLV8-61	A0A075B6I0	122 aa		8.99	□□□□□ -0.97
NR1H3-231	ENST00000529540	CDK2AP2	O75956	126 aa		8.99	□□□□□ -0.97
NR1H3-231	ENST00000529540	CYP4F30P	Q9H0H9	118 aa		8.98	□□□□□ -0.97
NR1H3-231	ENST00000529540	MPLKIP	Q8TAP9	179 aa		8.97	□□□□□ -0.97
NR1H3-231	ENST00000529540	PKHD1	P08F94	4074 aa		8.96	□□□□□ -0.97
NR1H3-231	ENST00000529540	IGFL1	Q6UW32	110 aa		8.95	□□□□□ -0.98
NR1H3-231	ENST00000529540		Q1T7F1	81 aa		8.94	□□□□□ -0.98
NR1H3-231	ENST00000529540	BRK1	Q8WUW1	75 aa		8.94	□□□□□ -0.98
NR1H3-231	ENST00000529540	C1orf64	Q8NEQ6	169 aa		8.94	□□□□□ -0.98
NR1H3-231	ENST00000529540	NDUFB1	O75438	58 aa		8.92	□□□□□ -0.98
NR1H3-231	ENST00000529540	LRP1B	Q9NZR2	4599 aa		8.91	□□□□□ -0.98
NR1H3-231	ENST00000529540	DNAH8	Q96JB1	4490 aa		8.9	□□□□□ -0.98
NR1H3-231	ENST00000529540	PSORS1C2	Q9UIG4	136 aa		8.9	□□□□□ -0.98
NR1H3-231	ENST00000529540	DYNC1H1	Q14204	4646 aa	Known RBP	8.89	□□□□□ -0.99
NR1H3-231	ENST00000529540	KRTAP29-1	A8MX34	341 aa	Predicted RBP	8.88	□□□□□ -0.99
NR1H3-231	ENST00000529540		H0Y9J4	135 aa		8.88	□□□□□ -0.99
NR1H3-231	ENST00000529540		H3BPC8	53 aa		8.88	□□□□□ -0.99
NR1H3-231	ENST00000529540	MP68	P56378	58 aa		8.88	□□□□□ -0.99
NR1H3-231	ENST00000529540	TRAV22	A0A0B4J277	110 aa		8.87	□□□□□ -0.99
NR1H3-231	ENST00000529540	SPRR1B	P22528	89 aa		8.87	□□□□□ -0.99
NR1H3-231	ENST00000529540		A0A087WSZ3	146 aa		8.86	□□□□□ -0.99
NR1H3-231	ENST00000529540	UBE2A	P49459	152 aa		8.86	□□□□□ -0.99
NR1H3-231	ENST00000529540	KRTAP11-1	Q8IUC1	163 aa		8.86	□□□□□ -0.99
NR1H3-231	ENST00000529540	FAM229A	H3BQW9	127 aa		8.85	□□□□□ -0.99
NR1H3-231	ENST00000529540	RPL37A	P61513	92 aa	Known RBP	8.85	□□□□□ -0.99
NR1H3-231	ENST00000529540		A0A0G2JQZ4	141 aa		8.85	□□□□□ -0.99
NR1H3-231	ENST00000529540	PLA2G1B	P04054	148 aa	Known RBP	8.84	□□□□□ -0.99
NR1H3-231	ENST00000529540	PRLH	P81277	87 aa		8.84	□□□□□ -0.99
NR1H3-231	ENST00000529540	WFDC13	Q8IUB5	93 aa		8.84	□□□□□ -0.99
NR1H3-231	ENST00000529540	SPANXA2-OT1	Q8N9U9	137 aa		8.84	□□□□□ -0.99
NR1H3-231	ENST00000529540	SMR3B	P02814	79 aa	Predicted RBP	8.83	□□□□□ -1
NR1H3-231	ENST00000529540	IGLV7-43	P04211	117 aa		8.83	□□□□□ -1
NR1H3-231	ENST00000529540	ZNF861P	O60384	105 aa		8.82	□□□□□ -1
NR1H3-231	ENST00000529540	C1orf195	Q5TG92	126 aa		8.82	□□□□□ -1
NR1H3-231	ENST00000529540	PRR15	Q8IV56	129 aa		8.82	□□□□□ -1
NR1H3-231	ENST00000529540		V9GYY9	64 aa		8.82	□□□□□ -1
NR1H3-231	ENST00000529540	DEFB116	Q30KQ4	102 aa		8.81	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms