RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 KRTAP26-1Q6PEX3 210 aa9.55□□□□□ -0.88
USP47-207ENST00000527733 SPRR4Q96PI1 79 aa9.55□□□□□ -0.88
USP47-207ENST00000527733 TP53AIP1Q9HCN2 124 aa9.55□□□□□ -0.88
USP47-207ENST00000527733 CELSR1Q9NYQ6 3014 aa9.54□□□□□ -0.88
USP47-207ENST00000527733 PCOTHQ58A44 107 aa9.53□□□□□ -0.88
USP47-207ENST00000527733 ANAPC11Q9NYG5 84 aa9.53□□□□□ -0.88
USP47-207ENST00000527733 STAB2Q8WWQ8 2551 aa9.52□□□□□ -0.89
USP47-207ENST00000527733 LINC00313P59037 77 aa9.52□□□□□ -0.89
USP47-207ENST00000527733 MXRA5Q9NR99 2828 aa9.52□□□□□ -0.89
USP47-207ENST00000527733 A8MWP4 228 aa9.51□□□□□ -0.89
USP47-207ENST00000527733 C1orf64Q8NEQ6 169 aa9.5□□□□□ -0.89
USP47-207ENST00000527733 A0A0G2JQZ4 141 aa9.5□□□□□ -0.89
USP47-207ENST00000527733 SPAG11AQ6PDA7 123 aa9.49□□□□□ -0.89
USP47-207ENST00000527733 LINC00304Q8N9R0 145 aa9.49□□□□□ -0.89
USP47-207ENST00000527733 MPLKIPQ8TAP9 179 aa9.49□□□□□ -0.89
USP47-207ENST00000527733 Q8NDZ9 215 aa9.48□□□□□ -0.89
USP47-207ENST00000527733 IGKV2D-30A0A075B6S6 120 aa9.47□□□□□ -0.89
USP47-207ENST00000527733 K7EQZ3 153 aa9.47□□□□□ -0.89
USP47-207ENST00000527733 IGKV2-30P06310 120 aa9.47□□□□□ -0.89
USP47-207ENST00000527733 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
USP47-207ENST00000527733 SPENQ96T58 3664 aaKnown RBP9.46□□□□□ -0.89
USP47-207ENST00000527733 C8orf87E5RJ46 101 aa9.46□□□□□ -0.9
USP47-207ENST00000527733 KRTAP21-3Q3LHN1 58 aa9.46□□□□□ -0.9
USP47-207ENST00000527733 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
USP47-207ENST00000527733 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.9
USP47-207ENST00000527733 V9GYY9 64 aa9.45□□□□□ -0.9
USP47-207ENST00000527733 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
USP47-207ENST00000527733 SPRR1AP35321 89 aa9.43□□□□□ -0.9
USP47-207ENST00000527733 J3QL48 77 aa9.42□□□□□ -0.9
USP47-207ENST00000527733 LINC01600Q96MT4 127 aa9.42□□□□□ -0.9
USP47-207ENST00000527733 TRAV22A0A0B4J277 110 aa9.42□□□□□ -0.9
USP47-207ENST00000527733 LCE6AA0A183 80 aa9.41□□□□□ -0.9
USP47-207ENST00000527733 PRR15Q8IV56 129 aa9.41□□□□□ -0.9
USP47-207ENST00000527733 OBSCN-AS1Q96MR7 158 aa9.41□□□□□ -0.9
USP47-207ENST00000527733 Q96NJ1 140 aa9.41□□□□□ -0.9
USP47-207ENST00000527733 PRR15LQ9BU68 103 aa9.4□□□□□ -0.9
USP47-207ENST00000527733 MRPL34Q9BQ48 92 aaKnown RBP9.4□□□□□ -0.91
USP47-207ENST00000527733 H3BPC8 53 aa9.39□□□□□ -0.91
USP47-207ENST00000527733 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
USP47-207ENST00000527733 Q6ZR54 194 aa9.38□□□□□ -0.91
USP47-207ENST00000527733 CUBNO60494 3623 aa9.38□□□□□ -0.91
USP47-207ENST00000527733 SMIM26A0A096LP01 95 aa9.37□□□□□ -0.91
USP47-207ENST00000527733 A0A1B0GVX0 72 aa9.37□□□□□ -0.91
USP47-207ENST00000527733 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
USP47-207ENST00000527733 SPINK1P00995 79 aa9.34□□□□□ -0.91
USP47-207ENST00000527733 DSCR10P59022 87 aa9.32□□□□□ -0.92
USP47-207ENST00000527733 PDZD2O15018 2839 aa9.32□□□□□ -0.92
USP47-207ENST00000527733 BRK1Q8WUW1 75 aa9.31□□□□□ -0.92
USP47-207ENST00000527733 ATP11AUNQ6ZP68 121 aa9.31□□□□□ -0.92
USP47-207ENST00000527733 KRTAP10-2P60368 255 aa9.3□□□□□ -0.92
USP47-207ENST00000527733 FAM229BQ4G0N7 80 aa9.3□□□□□ -0.92
USP47-207ENST00000527733 LOC101927531A0A1B0GV80 90 aa9.29□□□□□ -0.92
USP47-207ENST00000527733 CD164Q04900 197 aa9.29□□□□□ -0.92
USP47-207ENST00000527733 KRTAP10-1P60331 282 aa9.27□□□□□ -0.92
USP47-207ENST00000527733 BSNQ9UPA5 3926 aa9.27□□□□□ -0.93
USP47-207ENST00000527733 C7orf65Q6ZTY9 151 aa9.27□□□□□ -0.93
USP47-207ENST00000527733 SPRR1BP22528 89 aa9.26□□□□□ -0.93
USP47-207ENST00000527733 PRR26Q8N8Z3 221 aa9.26□□□□□ -0.93
USP47-207ENST00000527733 A6NED7 52 aa9.25□□□□□ -0.93
USP47-207ENST00000527733 CSMD2Q7Z408 3487 aa9.25□□□□□ -0.93
USP47-207ENST00000527733 K7ERS5 55 aa9.24□□□□□ -0.93
USP47-207ENST00000527733 ACYP2P14621 99 aa9.23□□□□□ -0.93
USP47-207ENST00000527733 C9orf92A6NGG3 77 aa9.23□□□□□ -0.93
USP47-207ENST00000527733 Q6ZRN7 208 aaPredicted RBP9.22□□□□□ -0.93
USP47-207ENST00000527733 PANO1I0J062 215 aa9.22□□□□□ -0.93
USP47-207ENST00000527733 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
USP47-207ENST00000527733 OTOGQ6ZRI0 2925 aa9.18□□□□□ -0.94
USP47-207ENST00000527733 NBPF19A0A087WUL8 3843 aa9.16□□□□□ -0.94
USP47-207ENST00000527733 KRTAP4-16G5E9R7 235 aaPredicted RBP9.16□□□□□ -0.94
USP47-207ENST00000527733 TENM1Q9UKZ4 2725 aa9.14□□□□□ -0.95
USP47-207ENST00000527733 KLKP1Q107X0 134 aa9.14□□□□□ -0.95
USP47-207ENST00000527733 PSPHP1O15172 72 aa9.11□□□□□ -0.95
USP47-207ENST00000527733 Q5VSD8 79 aa9.07□□□□□ -0.96
USP47-207ENST00000527733 RPS28P62857 69 aaKnown RBP9.07□□□□□ -0.96
USP47-207ENST00000527733 TENM3Q9P273 2699 aa9.06□□□□□ -0.96
USP47-207ENST00000527733 LINC00483Q53H64 154 aa9.05□□□□□ -0.96
USP47-207ENST00000527733 IGLV7-46A0A075B6I9 117 aa9.05□□□□□ -0.96
USP47-207ENST00000527733 ZFHX3Q15911 3703 aa9.05□□□□□ -0.96
USP47-207ENST00000527733 LINC00472Q9H8W2 130 aa9.04□□□□□ -0.96
USP47-207ENST00000527733 A0A1B0GU69 56 aa9.03□□□□□ -0.96
USP47-207ENST00000527733 OCR1Q9BZK8 76 aa9.03□□□□□ -0.96
USP47-207ENST00000527733 VWFP04275 2813 aa9.03□□□□□ -0.96
USP47-207ENST00000527733 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
USP47-207ENST00000527733 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
USP47-207ENST00000527733 A0A0U1RQV1 116 aa9.01□□□□□ -0.97
USP47-207ENST00000527733 H7BZZ5 65 aa9□□□□□ -0.97
USP47-207ENST00000527733 KRTAP11-1Q8IUC1 163 aa9□□□□□ -0.97
USP47-207ENST00000527733 MMP24-AS1A0A0U1RRL7 71 aa8.99□□□□□ -0.97
USP47-207ENST00000527733 COA5Q86WW8 74 aa8.99□□□□□ -0.97
USP47-207ENST00000527733 FBN1P35555 2871 aaKnown RBP8.98□□□□□ -0.97
USP47-207ENST00000527733 COX6B2Q6YFQ2 88 aa8.98□□□□□ -0.97
USP47-207ENST00000527733 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
USP47-207ENST00000527733 VPS13CQ709C8 3753 aa8.93□□□□□ -0.98
USP47-207ENST00000527733 A0A087X002 238 aa8.92□□□□□ -0.98
USP47-207ENST00000527733 SPANXA2-OT1Q8N9U9 137 aa8.92□□□□□ -0.98
USP47-207ENST00000527733 SVIPQ8NHG7 77 aa8.91□□□□□ -0.98
USP47-207ENST00000527733 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
USP47-207ENST00000527733 Q6ZSA8 131 aa8.88□□□□□ -0.99
USP47-207ENST00000527733 KRTAP13-1Q8IUC0 172 aa8.86□□□□□ -0.99
USP47-207ENST00000527733 Q8N1X5 172 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms