RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 FAM168BA1KXE4 195 aa6.46□□□□□ -1.38
USP35-201ENST00000526425 IGKV4-1P06312 121 aa6.46□□□□□ -1.38
USP35-201ENST00000526425 PDE6GP18545 87 aa6.46□□□□□ -1.38
USP35-201ENST00000526425 A0A096LNI7 61 aa6.45□□□□□ -1.38
USP35-201ENST00000526425 MOBPQ13875 183 aa6.44□□□□□ -1.38
USP35-201ENST00000526425 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
USP35-201ENST00000526425 A6NN06 94 aa6.44□□□□□ -1.38
USP35-201ENST00000526425 ERC2-IT1O76042 136 aa6.43□□□□□ -1.38
USP35-201ENST00000526425 Q8N9P0 234 aaPredicted RBP6.43□□□□□ -1.38
USP35-201ENST00000526425 PHF5AQ7RTV0 110 aaKnown RBP6.43□□□□□ -1.38
USP35-201ENST00000526425 LOC110117498A0A087WWA1 95 aa6.42□□□□□ -1.38
USP35-201ENST00000526425 C7orf33Q8WU49 177 aa6.42□□□□□ -1.38
USP35-201ENST00000526425 CASC2Q6XLA1 102 aa6.41□□□□□ -1.38
USP35-201ENST00000526425 PCOTHQ58A44 107 aa6.4□□□□□ -1.38
USP35-201ENST00000526425 IGLV6-57P01721 117 aa6.4□□□□□ -1.39
USP35-201ENST00000526425 DNAH10OSP0CZ25 163 aa6.39□□□□□ -1.39
USP35-201ENST00000526425 NUPR2A6NF83 97 aa6.39□□□□□ -1.39
USP35-201ENST00000526425 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
USP35-201ENST00000526425 PRLHP81277 87 aa6.38□□□□□ -1.39
USP35-201ENST00000526425 LINC00167Q96N53 147 aa6.38□□□□□ -1.39
USP35-201ENST00000526425 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
USP35-201ENST00000526425 LOC101927531A0A1B0GV80 90 aa6.37□□□□□ -1.39
USP35-201ENST00000526425 SPINK7P58062 85 aa6.37□□□□□ -1.39
USP35-201ENST00000526425 GVQW2A0A096LPI5 108 aaPredicted RBP6.37□□□□□ -1.39
USP35-201ENST00000526425 NDUFB1O75438 58 aa6.37□□□□□ -1.39
USP35-201ENST00000526425 ELOF1P60002 83 aaKnown RBP6.35□□□□□ -1.39
USP35-201ENST00000526425 CYP4F30PQ9H0H9 118 aa6.35□□□□□ -1.39
USP35-201ENST00000526425 A0A0G2JQZ4 141 aa6.34□□□□□ -1.39
USP35-201ENST00000526425 A0A1W2PNN7 141 aa6.34□□□□□ -1.39
USP35-201ENST00000526425 K7EQZ3 153 aa6.34□□□□□ -1.4
USP35-201ENST00000526425 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.4
USP35-201ENST00000526425 KRTAP26-1Q6PEX3 210 aa6.33□□□□□ -1.4
USP35-201ENST00000526425 COA5Q86WW8 74 aa6.33□□□□□ -1.4
USP35-201ENST00000526425 LY6G6CO95867 125 aa6.32□□□□□ -1.4
USP35-201ENST00000526425 H0Y9P7 68 aa6.31□□□□□ -1.4
USP35-201ENST00000526425 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
USP35-201ENST00000526425 LINC00476Q8WZB0 136 aa6.31□□□□□ -1.4
USP35-201ENST00000526425 TGP01266 2768 aa6.31□□□□□ -1.4
USP35-201ENST00000526425 KRTAP1-5Q9BYS1 174 aa6.31□□□□□ -1.4
USP35-201ENST00000526425 LINC00528Q8N1L1 170 aa6.31□□□□□ -1.4
USP35-201ENST00000526425 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
USP35-201ENST00000526425 Q75L30 129 aa6.3□□□□□ -1.4
USP35-201ENST00000526425 DHRS4-AS1Q9P1J3 65 aa6.3□□□□□ -1.4
USP35-201ENST00000526425 CSAG1Q6PB30 78 aa6.3□□□□□ -1.4
USP35-201ENST00000526425 APLNQ9ULZ1 77 aa6.29□□□□□ -1.4
USP35-201ENST00000526425 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
USP35-201ENST00000526425 RPL37AP61513 92 aaKnown RBP6.28□□□□□ -1.4
USP35-201ENST00000526425 C1orf134Q5TEV5 83 aa6.28□□□□□ -1.4
USP35-201ENST00000526425 H3BQ85 93 aa6.28□□□□□ -1.4
USP35-201ENST00000526425 Q6ZRX8 168 aa6.28□□□□□ -1.4
USP35-201ENST00000526425 IGLV1-50A0A075B6I6 118 aa6.26□□□□□ -1.41
USP35-201ENST00000526425 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
USP35-201ENST00000526425 NBDYA0A0U1RRE5 68 aa6.26□□□□□ -1.41
USP35-201ENST00000526425 Q8N377 158 aa6.26□□□□□ -1.41
USP35-201ENST00000526425 KCNQ1DNQ9H478 68 aa6.26□□□□□ -1.41
USP35-201ENST00000526425 Q9BRP9 147 aa6.23□□□□□ -1.41
USP35-201ENST00000526425 A0A087WSZ3 146 aa6.22□□□□□ -1.41
USP35-201ENST00000526425 A0A0A0MQY5 61 aa6.22□□□□□ -1.41
USP35-201ENST00000526425 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
USP35-201ENST00000526425 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.42
USP35-201ENST00000526425 H0Y9J4 135 aa6.2□□□□□ -1.42
USP35-201ENST00000526425 IGLV8-61A0A075B6I0 122 aa6.2□□□□□ -1.42
USP35-201ENST00000526425 CSMD3Q7Z407 3707 aa6.19□□□□□ -1.42
USP35-201ENST00000526425 TLX1NBP0CAT3 122 aa6.19□□□□□ -1.42
USP35-201ENST00000526425 WWC2-AS2Q96NR7 200 aa6.19□□□□□ -1.42
USP35-201ENST00000526425 DSCR10P59022 87 aa6.19□□□□□ -1.42
USP35-201ENST00000526425 IGLV5-52A0A0A0MRZ9 124 aa6.17□□□□□ -1.42
USP35-201ENST00000526425 COL7A1Q02388 2944 aa6.17□□□□□ -1.42
USP35-201ENST00000526425 A0A1W2PNM2 257 aa6.17□□□□□ -1.42
USP35-201ENST00000526425 KRTAP21-3Q3LHN1 58 aa6.16□□□□□ -1.42
USP35-201ENST00000526425 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
USP35-201ENST00000526425 SPINK6Q6UWN8 80 aa6.15□□□□□ -1.42
USP35-201ENST00000526425 KRTAP7-1Q8IUC3 87 aa6.15□□□□□ -1.42
USP35-201ENST00000526425 Q8NBF4 154 aa6.15□□□□□ -1.42
USP35-201ENST00000526425 C9orf163Q8N9P6 203 aa6.15□□□□□ -1.43
USP35-201ENST00000526425 RTL8CO15255 209 aa6.14□□□□□ -1.43
USP35-201ENST00000526425 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
USP35-201ENST00000526425 ANK2Q01484 3957 aa6.14□□□□□ -1.43
USP35-201ENST00000526425 PANO1I0J062 215 aa6.14□□□□□ -1.43
USP35-201ENST00000526425 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
USP35-201ENST00000526425 PLA2G2DQ9UNK4 145 aa6.13□□□□□ -1.43
USP35-201ENST00000526425 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.13□□□□□ -1.43
USP35-201ENST00000526425 Q6ZR54 194 aa6.13□□□□□ -1.43
USP35-201ENST00000526425 DMBT1Q9UGM3 2413 aaPredicted RBP6.12□□□□□ -1.43
USP35-201ENST00000526425 IGFL1Q6UW32 110 aa6.12□□□□□ -1.43
USP35-201ENST00000526425 CNBPP62633 177 aaKnown RBP6.12□□□□□ -1.43
USP35-201ENST00000526425 A0A087WTM6 91 aa6.12□□□□□ -1.43
USP35-201ENST00000526425 LINC01558Q9Y6Z2 57 aa6.11□□□□□ -1.43
USP35-201ENST00000526425 KRTAP11-1Q8IUC1 163 aa6.11□□□□□ -1.43
USP35-201ENST00000526425 HUWE1Q7Z6Z7 4374 aaKnown RBP6.11□□□□□ -1.43
USP35-201ENST00000526425 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
USP35-201ENST00000526425 IGLV5-37A0A075B6J1 123 aa6.09□□□□□ -1.43
USP35-201ENST00000526425 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
USP35-201ENST00000526425 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
USP35-201ENST00000526425 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.44
USP35-201ENST00000526425 CIRBP-AS1Q8TBR5 109 aa6.09□□□□□ -1.44
USP35-201ENST00000526425 SPANXA2-OT1Q8N9U9 137 aa6.08□□□□□ -1.44
USP35-201ENST00000526425 SPRR1AP35321 89 aa6.08□□□□□ -1.44
USP35-201ENST00000526425 IGLV5-48A0A075B6I7 105 aa6.08□□□□□ -1.44
USP35-201ENST00000526425 A0A1B0GU69 56 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms