RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 FAT1Q14517 4588 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 IGKV3D-7A0A0C4DH55 119 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 A0A1B0GW54 56 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 J3KT08 172 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 M0R378 163 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 ZNF73O43830 326 aaPredicted RBP4.38□□□□□ -1.71
SPIDR-218ENST00000522222 ELOF1P60002 83 aaKnown RBP4.38□□□□□ -1.71
SPIDR-218ENST00000522222 RPS28P62857 69 aaKnown RBP4.38□□□□□ -1.71
SPIDR-218ENST00000522222 C9orf129Q5T035 196 aaKnown RBP4.38□□□□□ -1.71
SPIDR-218ENST00000522222 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
SPIDR-218ENST00000522222 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
SPIDR-218ENST00000522222 C9orf116Q5BN46 136 aaPredicted RBP4.37□□□□□ -1.71
SPIDR-218ENST00000522222 Q5VSD8 79 aa4.37□□□□□ -1.71
SPIDR-218ENST00000522222 Q6ZQY7 126 aa4.37□□□□□ -1.71
SPIDR-218ENST00000522222 SCXQ7RTU7 201 aa4.37□□□□□ -1.71
SPIDR-218ENST00000522222 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
SPIDR-218ENST00000522222 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
SPIDR-218ENST00000522222 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
SPIDR-218ENST00000522222 CNBPP62633 177 aaKnown RBP4.36□□□□□ -1.71
SPIDR-218ENST00000522222 PRR3P79522 188 aaKnown RBP4.36□□□□□ -1.71
SPIDR-218ENST00000522222 C10orf25Q5T742 122 aa4.36□□□□□ -1.71
SPIDR-218ENST00000522222 TRBV7-4A0A0J9YYF1 115 aa4.35□□□□□ -1.71
SPIDR-218ENST00000522222 VPREB1P12018 145 aa4.35□□□□□ -1.71
SPIDR-218ENST00000522222 C9orf163Q8N9P6 203 aa4.35□□□□□ -1.71
SPIDR-218ENST00000522222 TRAV7A0A075B6U4 112 aa4.34□□□□□ -1.71
SPIDR-218ENST00000522222 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
SPIDR-218ENST00000522222 PANO1I0J062 215 aa4.34□□□□□ -1.71
SPIDR-218ENST00000522222 TLX1NBP0CAT3 122 aa4.34□□□□□ -1.71
SPIDR-218ENST00000522222 PLA2G2DQ9UNK4 145 aa4.34□□□□□ -1.71
SPIDR-218ENST00000522222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.34□□□□□ -1.71
SPIDR-218ENST00000522222 A0A087WVE0 104 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 CHTF8P0CG12 524 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 LINC01547P58512 204 aaPredicted RBP4.33□□□□□ -1.72
SPIDR-218ENST00000522222 Q6ZVQ6 151 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 NKAPP1Q8N9T2 125 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 Q8NDZ9 215 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 CIRBP-AS1Q8TBR5 109 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 DHRS4-AS1Q9P1J3 65 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 VPS13BQ7Z7G8 4022 aa4.33□□□□□ -1.72
SPIDR-218ENST00000522222 NDUFC1O43677 76 aa4.32□□□□□ -1.72
SPIDR-218ENST00000522222 SYCNQ0VAF6 134 aa4.32□□□□□ -1.72
SPIDR-218ENST00000522222 Q6ZRU5 148 aa4.32□□□□□ -1.72
SPIDR-218ENST00000522222 KCNQ1DNQ9H478 68 aa4.32□□□□□ -1.72
SPIDR-218ENST00000522222 XAGE1AQ9HD64 81 aa4.32□□□□□ -1.72
SPIDR-218ENST00000522222 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
SPIDR-218ENST00000522222 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
SPIDR-218ENST00000522222 PRYO14603 147 aa4.31□□□□□ -1.72
SPIDR-218ENST00000522222 ATP5EP56381 51 aaPredicted RBP4.31□□□□□ -1.72
SPIDR-218ENST00000522222 LCE4AQ5TA78 99 aa4.31□□□□□ -1.72
SPIDR-218ENST00000522222 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
SPIDR-218ENST00000522222 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
SPIDR-218ENST00000522222 ERC2-IT1O76042 136 aa4.3□□□□□ -1.72
SPIDR-218ENST00000522222 PLA2G1BP04054 148 aaKnown RBP4.3□□□□□ -1.72
SPIDR-218ENST00000522222 A0A096LNI7 61 aa4.29□□□□□ -1.72
SPIDR-218ENST00000522222 KRTAP10-4P60372 401 aaPredicted RBP4.29□□□□□ -1.72
SPIDR-218ENST00000522222 KLKP1Q107X0 134 aa4.29□□□□□ -1.72
SPIDR-218ENST00000522222 FAM19A1Q7Z5A9 133 aa4.29□□□□□ -1.72
SPIDR-218ENST00000522222 PKIGQ9Y2B9 76 aa4.29□□□□□ -1.72
SPIDR-218ENST00000522222 RPL37AP61513 92 aaKnown RBP4.28□□□□□ -1.72
SPIDR-218ENST00000522222 DPH3Q96FX2 82 aa4.28□□□□□ -1.72
SPIDR-218ENST00000522222 PLAC8Q9NZF1 115 aa4.28□□□□□ -1.72
SPIDR-218ENST00000522222 MYCBP2O75592 4640 aa4.28□□□□□ -1.72
SPIDR-218ENST00000522222 IGLV5-48A0A075B6I7 105 aa4.27□□□□□ -1.73
SPIDR-218ENST00000522222 FAM236DA0A1B0GTK5 79 aa4.27□□□□□ -1.73
SPIDR-218ENST00000522222 FAM236CP0DP71 79 aa4.27□□□□□ -1.73
SPIDR-218ENST00000522222 NREPQ16612 68 aa4.27□□□□□ -1.73
SPIDR-218ENST00000522222 Q6ZRP5 223 aa4.27□□□□□ -1.73
SPIDR-218ENST00000522222 Q6ZRX8 168 aa4.27□□□□□ -1.73
SPIDR-218ENST00000522222 SRRM2Q9UQ35 2752 aaKnown RBP4.26□□□□□ -1.73
SPIDR-218ENST00000522222 ETDCA0A1B0GVM5 59 aa4.26□□□□□ -1.73
SPIDR-218ENST00000522222 C20orf197Q8N268 126 aa4.26□□□□□ -1.73
SPIDR-218ENST00000522222 DMBT1Q9UGM3 2413 aaPredicted RBP4.26□□□□□ -1.73
SPIDR-218ENST00000522222 SPRR1AP35321 89 aa4.25□□□□□ -1.73
SPIDR-218ENST00000522222 C7orf33Q8WU49 177 aa4.25□□□□□ -1.73
SPIDR-218ENST00000522222 LINC00474Q9P2X8 69 aa4.25□□□□□ -1.73
SPIDR-218ENST00000522222 SERP1Q9Y6X1 66 aa4.25□□□□□ -1.73
SPIDR-218ENST00000522222 PKHD1L1Q86WI1 4243 aa4.25□□□□□ -1.73
SPIDR-218ENST00000522222 IGLV1-50A0A075B6I6 118 aa4.24□□□□□ -1.73
SPIDR-218ENST00000522222 BPY2O14599 106 aa4.24□□□□□ -1.73
SPIDR-218ENST00000522222 LCE5AQ5TCM9 118 aa4.24□□□□□ -1.73
SPIDR-218ENST00000522222 RPL37AP8A6NKH3 93 aa4.23□□□□□ -1.73
SPIDR-218ENST00000522222 F8WEM9 126 aa4.23□□□□□ -1.73
SPIDR-218ENST00000522222 C5orf47Q569G3 176 aa4.23□□□□□ -1.73
SPIDR-218ENST00000522222 FAM19A5Q7Z5A7 132 aaPredicted RBP4.23□□□□□ -1.73
SPIDR-218ENST00000522222 A0A1W2PNN7 141 aa4.22□□□□□ -1.73
SPIDR-218ENST00000522222 KRTAP4-16G5E9R7 235 aaPredicted RBP4.22□□□□□ -1.73
SPIDR-218ENST00000522222 H7BZZ5 65 aa4.22□□□□□ -1.73
SPIDR-218ENST00000522222 MRPL55Q7Z7F7 128 aaKnown RBP4.22□□□□□ -1.73
SPIDR-218ENST00000522222 Q8N377 158 aa4.22□□□□□ -1.73
SPIDR-218ENST00000522222 Q8NBF4 154 aa4.22□□□□□ -1.73
SPIDR-218ENST00000522222 SPRR4Q96PI1 79 aa4.22□□□□□ -1.73
SPIDR-218ENST00000522222 IGKV4-1P06312 121 aa4.21□□□□□ -1.74
SPIDR-218ENST00000522222 C1orf137Q5JT78 98 aa4.21□□□□□ -1.74
SPIDR-218ENST00000522222 SERTAD4-AS1Q5TG53 156 aa4.21□□□□□ -1.74
SPIDR-218ENST00000522222 CYSTM1Q9H1C7 97 aa4.21□□□□□ -1.74
SPIDR-218ENST00000522222 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
SPIDR-218ENST00000522222 FAM168BA1KXE4 195 aa4.2□□□□□ -1.74
SPIDR-218ENST00000522222 KRTAP29-1A8MX34 341 aaPredicted RBP4.2□□□□□ -1.74
SPIDR-218ENST00000522222 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms