RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 PLCE1Q9P212 2302 aa1.07□□□□□ -2.24
PABPC1-211ENST00000519596 FBN1P35555 2871 aaKnown RBP1.07□□□□□ -2.24
PABPC1-211ENST00000519596 PRLHP81277 87 aa1.07□□□□□ -2.24
PABPC1-211ENST00000519596 TMEM167AQ8TBQ9 72 aa1.07□□□□□ -2.24
PABPC1-211ENST00000519596 TOMM7Q9P0U1 55 aa1.07□□□□□ -2.24
PABPC1-211ENST00000519596 PKDREJQ9NTG1 2253 aa1.06□□□□□ -2.24
PABPC1-211ENST00000519596 TPRP12270 2363 aaKnown RBP1.06□□□□□ -2.24
PABPC1-211ENST00000519596 PIEZO2Q9H5I5 2752 aa1.06□□□□□ -2.24
PABPC1-211ENST00000519596 K7EIM0 57 aa1.06□□□□□ -2.24
PABPC1-211ENST00000519596 CLPSL2Q6UWE3 100 aa1.06□□□□□ -2.24
PABPC1-211ENST00000519596 KRTAP13-1Q8IUC0 172 aa1.06□□□□□ -2.24
PABPC1-211ENST00000519596 NOP10Q9NPE3 64 aaKnown RBP1.06□□□□□ -2.24
PABPC1-211ENST00000519596 ROS1P08922 2347 aa1.06□□□□□ -2.24
PABPC1-211ENST00000519596 USF3Q68DE3 2245 aa1.05□□□□□ -2.24
PABPC1-211ENST00000519596 KRTAP12-4P60329 112 aa1.05□□□□□ -2.24
PABPC1-211ENST00000519596 S4R3F8 94 aa1.05□□□□□ -2.24
PABPC1-211ENST00000519596 PCNX1Q96RV3 2341 aa1.04□□□□□ -2.24
PABPC1-211ENST00000519596 A8MTW9 85 aa1.03□□□□□ -2.24
PABPC1-211ENST00000519596 KLK9Q2XQG4 91 aa1.03□□□□□ -2.24
PABPC1-211ENST00000519596 DEFB106AQ8N104 65 aa1.03□□□□□ -2.24
PABPC1-211ENST00000519596 IGF2RP11717 2491 aa1.03□□□□□ -2.25
PABPC1-211ENST00000519596 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
PABPC1-211ENST00000519596 ZNF462Q96JM2 2506 aa1.01□□□□□ -2.25
PABPC1-211ENST00000519596 J3QKU1 62 aa1.01□□□□□ -2.25
PABPC1-211ENST00000519596 KRTAP12-3P60328 96 aa1.01□□□□□ -2.25
PABPC1-211ENST00000519596 KRTAP6-3Q3LI67 103 aa1.01□□□□□ -2.25
PABPC1-211ENST00000519596 RPL39P5Q59GN2 51 aa1.01□□□□□ -2.25
PABPC1-211ENST00000519596 C2CD3Q4AC94 2353 aa1□□□□□ -2.25
PABPC1-211ENST00000519596 A0A0D9SG42 100 aa1□□□□□ -2.25
PABPC1-211ENST00000519596 DEFB104AQ8WTQ1 72 aa0.99□□□□□ -2.25
PABPC1-211ENST00000519596 CSPG4Q6UVK1 2322 aa0.99□□□□□ -2.25
PABPC1-211ENST00000519596 DEFB108AA8MXU0 73 aa0.98□□□□□ -2.25
PABPC1-211ENST00000519596 SPINK1P00995 79 aa0.98□□□□□ -2.25
PABPC1-211ENST00000519596 RP1L1Q8IWN7 2480 aaPredicted RBP0.96□□□□□ -2.26
PABPC1-211ENST00000519596 MUC6Q6W4X9 2439 aa0.96□□□□□ -2.26
PABPC1-211ENST00000519596 SPTBN2O15020 2390 aa0.96□□□□□ -2.26
PABPC1-211ENST00000519596 KRTAP21-3Q3LHN1 58 aa0.95□□□□□ -2.26
PABPC1-211ENST00000519596 SPTBN1Q01082 2364 aaKnown RBP0.94□□□□□ -2.26
PABPC1-211ENST00000519596 ABCA2Q9BZC7 2435 aa0.94□□□□□ -2.26
PABPC1-211ENST00000519596 AKAP6Q13023 2319 aa0.93□□□□□ -2.26
PABPC1-211ENST00000519596 M0QZ58 72 aa0.93□□□□□ -2.26
PABPC1-211ENST00000519596 ASH1LQ9NR48 2969 aaKnown RBP0.91□□□□□ -2.26
PABPC1-211ENST00000519596 CACNA1HO95180 2353 aa0.91□□□□□ -2.26
PABPC1-211ENST00000519596 F8P00451 2351 aa0.91□□□□□ -2.26
PABPC1-211ENST00000519596 H0YGG7 62 aa0.91□□□□□ -2.26
PABPC1-211ENST00000519596 H3BUX3 64 aa0.91□□□□□ -2.26
PABPC1-211ENST00000519596 DSPP15924 2871 aaKnown RBP0.9□□□□□ -2.26
PABPC1-211ENST00000519596 MEGF8Q7Z7M0 2845 aa0.9□□□□□ -2.26
PABPC1-211ENST00000519596 WNK1Q9H4A3 2382 aa0.89□□□□□ -2.27
PABPC1-211ENST00000519596 A0A0C4DFX4 3053 aa0.89□□□□□ -2.27
PABPC1-211ENST00000519596 ABCA12Q86UK0 2595 aa0.89□□□□□ -2.27
PABPC1-211ENST00000519596 AHNAKQ09666 5890 aaKnown RBP0.89□□□□□ -2.27
PABPC1-211ENST00000519596 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
PABPC1-211ENST00000519596 DEFB135Q30KP9 77 aa0.88□□□□□ -2.27
PABPC1-211ENST00000519596 PRRC2CQ9Y520 2896 aaKnown RBP0.87□□□□□ -2.27
PABPC1-211ENST00000519596 REV3LO60673 3130 aa0.87□□□□□ -2.27
PABPC1-211ENST00000519596 GVINP1Q7Z2Y8 2422 aa0.87□□□□□ -2.27
PABPC1-211ENST00000519596 FBN3Q75N90 2809 aa0.87□□□□□ -2.27
PABPC1-211ENST00000519596 ACACAQ13085 2346 aa0.87□□□□□ -2.27
PABPC1-211ENST00000519596 TTC28Q96AY4 2481 aa0.87□□□□□ -2.27
PABPC1-211ENST00000519596 SPTA1P02549 2419 aa0.86□□□□□ -2.27
PABPC1-211ENST00000519596 CEP290O15078 2479 aa0.86□□□□□ -2.27
PABPC1-211ENST00000519596 APELAP0DMC3 54 aa0.86□□□□□ -2.27
PABPC1-211ENST00000519596 ZNF292O60281 2723 aa0.86□□□□□ -2.27
PABPC1-211ENST00000519596 EP300Q09472 2414 aaPredicted RBP0.85□□□□□ -2.27
PABPC1-211ENST00000519596 TRANK1O15050 2925 aa0.85□□□□□ -2.27
PABPC1-211ENST00000519596 PKD1L2Q7Z442 2459 aa0.84□□□□□ -2.27
PABPC1-211ENST00000519596 CELSR2Q9HCU4 2923 aa0.84□□□□□ -2.27
PABPC1-211ENST00000519596 M0R2T5 61 aa0.84□□□□□ -2.27
PABPC1-211ENST00000519596 TNP1P09430 55 aa0.84□□□□□ -2.27
PABPC1-211ENST00000519596 RHPN1-AS1Q9BWJ2 59 aa0.84□□□□□ -2.27
PABPC1-211ENST00000519596 COL6A5A8TX70 2615 aa0.84□□□□□ -2.28
PABPC1-211ENST00000519596 C9orf92A6NGG3 77 aa0.83□□□□□ -2.28
PABPC1-211ENST00000519596 STATHP02808 62 aa0.83□□□□□ -2.28
PABPC1-211ENST00000519596 CHD7Q9P2D1 2997 aa0.83□□□□□ -2.28
PABPC1-211ENST00000519596 TENM2Q9NT68 2774 aa0.83□□□□□ -2.28
PABPC1-211ENST00000519596 HTN1P15515 57 aa0.82□□□□□ -2.28
PABPC1-211ENST00000519596 DEFB1P60022 68 aa0.82□□□□□ -2.28
PABPC1-211ENST00000519596 COX14Q96I36 57 aa0.82□□□□□ -2.28
PABPC1-211ENST00000519596 POLQO75417 2590 aa0.81□□□□□ -2.28
PABPC1-211ENST00000519596 SPTBN4Q9H254 2564 aa0.81□□□□□ -2.28
PABPC1-211ENST00000519596 SPART-AS1P0CW21 52 aa0.81□□□□□ -2.28
PABPC1-211ENST00000519596 NAV2Q8IVL1 2488 aa0.81□□□□□ -2.28
PABPC1-211ENST00000519596 UBR5O95071 2799 aaPredicted RBP0.8□□□□□ -2.28
PABPC1-211ENST00000519596 SPINK6Q6UWN8 80 aa0.8□□□□□ -2.28
PABPC1-211ENST00000519596 SRRM2Q9UQ35 2752 aaKnown RBP0.8□□□□□ -2.28
PABPC1-211ENST00000519596 CCDC168Q8NDH2 2452 aa0.79□□□□□ -2.28
PABPC1-211ENST00000519596 VPS13DQ5THJ4 4388 aa0.79□□□□□ -2.28
PABPC1-211ENST00000519596 APC2O95996 2303 aa0.79□□□□□ -2.28
PABPC1-211ENST00000519596 BSNQ9UPA5 3926 aa0.79□□□□□ -2.28
PABPC1-211ENST00000519596 CSMD3Q7Z407 3707 aa0.79□□□□□ -2.28
PABPC1-211ENST00000519596 CELSR1Q9NYQ6 3014 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 NCOR1O75376 2440 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 CREBBPQ92793 2442 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 TENM1Q9UKZ4 2725 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 KRTAP2-3P0C7H8 128 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 DEFB124Q8NES8 71 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 LYSTQ99698 3801 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 SMR3AQ99954 134 aa0.78□□□□□ -2.28
PABPC1-211ENST00000519596 KRTAP2-4Q9BYR9 128 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms