RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 TRBV7-7A0A0K0K1E9 115 aa5.69□□□□□ -1.5
CTNNA1-205ENST00000517904 TRGC2P03986 189 aa5.69□□□□□ -1.5
CTNNA1-205ENST00000517904 KRTAP10-10P60014 251 aa5.69□□□□□ -1.5
CTNNA1-205ENST00000517904 SVBPQ8N300 66 aa5.69□□□□□ -1.5
CTNNA1-205ENST00000517904 TRBV20-1A0A075B6N2 111 aa5.68□□□□□ -1.5
CTNNA1-205ENST00000517904 ZNF815PA8K554 130 aa5.68□□□□□ -1.5
CTNNA1-205ENST00000517904 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
CTNNA1-205ENST00000517904 F8WEM9 126 aa5.67□□□□□ -1.5
CTNNA1-205ENST00000517904 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
CTNNA1-205ENST00000517904 CLEC2BQ92478 149 aa5.67□□□□□ -1.5
CTNNA1-205ENST00000517904 A4D1N5 150 aa5.66□□□□□ -1.5
CTNNA1-205ENST00000517904 A6NDN8 102 aa5.66□□□□□ -1.5
CTNNA1-205ENST00000517904 A8MUU9 505 aa5.66□□□□□ -1.5
CTNNA1-205ENST00000517904 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
CTNNA1-205ENST00000517904 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
CTNNA1-205ENST00000517904 NDUFA5Q16718 116 aa5.64□□□□□ -1.51
CTNNA1-205ENST00000517904 Q6JHZ5 121 aa5.64□□□□□ -1.51
CTNNA1-205ENST00000517904 KRTAP16-1A8MUX0 517 aa5.63□□□□□ -1.51
CTNNA1-205ENST00000517904 SYS1-DBNDD2H3BUS1 97 aa5.63□□□□□ -1.51
CTNNA1-205ENST00000517904 SMIM11BQ8TCY0 68 aa5.63□□□□□ -1.51
CTNNA1-205ENST00000517904 FAM236DA0A1B0GTK5 79 aa5.62□□□□□ -1.51
CTNNA1-205ENST00000517904 LST1O00453 97 aa5.62□□□□□ -1.51
CTNNA1-205ENST00000517904 FAM236CP0DP71 79 aa5.62□□□□□ -1.51
CTNNA1-205ENST00000517904 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
CTNNA1-205ENST00000517904 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
CTNNA1-205ENST00000517904 KRTAP19-4Q3LI73 84 aa5.61□□□□□ -1.51
CTNNA1-205ENST00000517904 OCIAD2Q56VL3 154 aa5.61□□□□□ -1.51
CTNNA1-205ENST00000517904 LINC01545Q5VT33 79 aa5.61□□□□□ -1.51
CTNNA1-205ENST00000517904 Q6ZQY7 126 aa5.61□□□□□ -1.51
CTNNA1-205ENST00000517904 MPLKIPQ8TAP9 179 aa5.61□□□□□ -1.51
CTNNA1-205ENST00000517904 TRAV13-2A0A0B4J235 113 aa5.6□□□□□ -1.51
CTNNA1-205ENST00000517904 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
CTNNA1-205ENST00000517904 SLC7A5P1Q8MH63 180 aa5.6□□□□□ -1.51
CTNNA1-205ENST00000517904 LINC00846Q9NV44 126 aa5.6□□□□□ -1.51
CTNNA1-205ENST00000517904 NEBP20929 6669 aa5.59□□□□□ -1.51
CTNNA1-205ENST00000517904 IFITM1P13164 125 aa5.59□□□□□ -1.51
CTNNA1-205ENST00000517904 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
CTNNA1-205ENST00000517904 LINC00575Q6W349 94 aa5.59□□□□□ -1.51
CTNNA1-205ENST00000517904 MUSTN1Q8IVN3 82 aa5.59□□□□□ -1.51
CTNNA1-205ENST00000517904 HRES1P13985 223 aa5.58□□□□□ -1.52
CTNNA1-205ENST00000517904 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
CTNNA1-205ENST00000517904 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 hADV29S1A0JD25 119 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 H3BUT2 72 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 DSCR10P59022 87 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 PET117Q6UWS5 81 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 Q6ZVH6 145 aa5.56□□□□□ -1.52
CTNNA1-205ENST00000517904 RBM12B-AS1Q9P1G2 102 aa5.55□□□□□ -1.52
CTNNA1-205ENST00000517904 VAMP3Q15836 100 aa5.54□□□□□ -1.52
CTNNA1-205ENST00000517904 SS18L2Q9UHA2 77 aa5.53□□□□□ -1.52
CTNNA1-205ENST00000517904 NOTCH2NLQ7Z3S9 236 aa5.52□□□□□ -1.53
CTNNA1-205ENST00000517904 COLCA2A8K830 154 aa5.51□□□□□ -1.53
CTNNA1-205ENST00000517904 C3orf79P0CE67 100 aa5.51□□□□□ -1.53
CTNNA1-205ENST00000517904 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.51□□□□□ -1.53
CTNNA1-205ENST00000517904 PPDPFLQ8WWR9 84 aa5.5□□□□□ -1.53
CTNNA1-205ENST00000517904 SNHG12Q9BXW3 62 aa5.5□□□□□ -1.53
CTNNA1-205ENST00000517904 A0A087WSZ3 146 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
CTNNA1-205ENST00000517904 SCGB1D1O95968 90 aa5.48□□□□□ -1.53
CTNNA1-205ENST00000517904 TEN1Q86WV5 123 aa5.48□□□□□ -1.53
CTNNA1-205ENST00000517904 ATOH7Q8N100 152 aa5.47□□□□□ -1.53
CTNNA1-205ENST00000517904 LINC00313P59037 77 aa5.46□□□□□ -1.54
CTNNA1-205ENST00000517904 KRTDAPP60985 99 aa5.46□□□□□ -1.54
CTNNA1-205ENST00000517904 SIGMAR1Q99720 223 aa5.46□□□□□ -1.54
CTNNA1-205ENST00000517904 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
CTNNA1-205ENST00000517904 KRTAP4-9Q9BYQ8 210 aa5.43□□□□□ -1.54
CTNNA1-205ENST00000517904 BVES-AS1Q5T3Y7 98 aa5.42□□□□□ -1.54
CTNNA1-205ENST00000517904 A8MWP4 228 aa5.41□□□□□ -1.54
CTNNA1-205ENST00000517904 NDUFV3P56181 108 aaKnown RBP5.41□□□□□ -1.54
CTNNA1-205ENST00000517904 MTURNQ8N3F0 131 aa5.41□□□□□ -1.54
CTNNA1-205ENST00000517904 C12orf57Q99622 126 aa5.41□□□□□ -1.54
CTNNA1-205ENST00000517904 IGKV4-1P06312 121 aa5.4□□□□□ -1.54
CTNNA1-205ENST00000517904 A0A1W2PNM2 257 aa5.39□□□□□ -1.55
CTNNA1-205ENST00000517904 H3BMG7 143 aa5.38□□□□□ -1.55
CTNNA1-205ENST00000517904 C21orf62-AS1Q17RA5 79 aa5.38□□□□□ -1.55
CTNNA1-205ENST00000517904 DEFB116Q30KQ4 102 aa5.37□□□□□ -1.55
CTNNA1-205ENST00000517904 FAM218AQ96MZ4 157 aa5.37□□□□□ -1.55
CTNNA1-205ENST00000517904 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
CTNNA1-205ENST00000517904 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
CTNNA1-205ENST00000517904 C9orf118A6NHY6 69 aa5.36□□□□□ -1.55
CTNNA1-205ENST00000517904 KRTAP20-1Q3LI63 56 aa5.36□□□□□ -1.55
CTNNA1-205ENST00000517904 COA6Q5JTJ3 125 aaKnown RBP5.36□□□□□ -1.55
CTNNA1-205ENST00000517904 IGHV6-1A0A0B4J1U7 121 aa5.35□□□□□ -1.55
CTNNA1-205ENST00000517904 SPINK7P58062 85 aa5.35□□□□□ -1.55
CTNNA1-205ENST00000517904 LINC00472Q9H8W2 130 aa5.34□□□□□ -1.55
CTNNA1-205ENST00000517904 SNRPEP62304 92 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-205ENST00000517904 ZCCHC13Q8WW36 166 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-205ENST00000517904 KMT2DO14686 5537 aa5.32□□□□□ -1.56
CTNNA1-205ENST00000517904 TRBV7-4A0A0J9YYF1 115 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms