RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 SMCR5Q8TEV8 140 aa7.75□□□□□ -1.17
SPCS3-204ENST00000513139 SPRR4Q96PI1 79 aa7.75□□□□□ -1.17
SPCS3-204ENST00000513139 Q9BRP9 147 aa7.75□□□□□ -1.17
SPCS3-204ENST00000513139 CBY1Q9Y3M2 126 aa7.75□□□□□ -1.17
SPCS3-204ENST00000513139 H7C2G1 150 aa7.74□□□□□ -1.17
SPCS3-204ENST00000513139 ERC2-IT1O76042 136 aa7.74□□□□□ -1.17
SPCS3-204ENST00000513139 Q6ZRX8 168 aa7.74□□□□□ -1.17
SPCS3-204ENST00000513139 RAB37Q96AX2 223 aa7.74□□□□□ -1.17
SPCS3-204ENST00000513139 ZNF706Q9Y5V0 76 aaPredicted RBP7.74□□□□□ -1.17
SPCS3-204ENST00000513139 HINT1P49773 126 aaPredicted RBP7.73□□□□□ -1.17
SPCS3-204ENST00000513139 A0A0B4J2C4 111 aa7.72□□□□□ -1.17
SPCS3-204ENST00000513139 TSTD3H0UI37 97 aa7.72□□□□□ -1.17
SPCS3-204ENST00000513139 K7ERJ3 54 aa7.72□□□□□ -1.17
SPCS3-204ENST00000513139 COX7BP24311 80 aa7.72□□□□□ -1.17
SPCS3-204ENST00000513139 RPS29P62273 56 aaKnown RBP7.72□□□□□ -1.17
SPCS3-204ENST00000513139 BVES-AS1Q5T3Y7 98 aa7.72□□□□□ -1.17
SPCS3-204ENST00000513139 NHP2Q9NX24 153 aaKnown RBP7.71□□□□□ -1.18
SPCS3-204ENST00000513139 ELOF1P60002 83 aaKnown RBP7.7□□□□□ -1.18
SPCS3-204ENST00000513139 PRO1854Q9UHT4 67 aa7.7□□□□□ -1.18
SPCS3-204ENST00000513139 TRBV7-6A0A0J9YX20 115 aa7.69□□□□□ -1.18
SPCS3-204ENST00000513139 KRTAP10-6P60371 365 aaPredicted RBP7.69□□□□□ -1.18
SPCS3-204ENST00000513139 Q8N377 158 aa7.69□□□□□ -1.18
SPCS3-204ENST00000513139 ST20-AS1Q8NBB2 130 aa7.68□□□□□ -1.18
SPCS3-204ENST00000513139 A0A1B0GWB2 263 aa7.67□□□□□ -1.18
SPCS3-204ENST00000513139 SLC25A20O43772 301 aa7.66□□□□□ -1.18
SPCS3-204ENST00000513139 VAMP3Q15836 100 aa7.66□□□□□ -1.18
SPCS3-204ENST00000513139 Q1RN00 199 aa7.66□□□□□ -1.18
SPCS3-204ENST00000513139 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
SPCS3-204ENST00000513139 KRTAP9-7A8MTY7 169 aa7.65□□□□□ -1.18
SPCS3-204ENST00000513139 GAGE2AQ6NT46 116 aa7.65□□□□□ -1.18
SPCS3-204ENST00000513139 M0R143 59 aa7.64□□□□□ -1.19
SPCS3-204ENST00000513139 TRIAP1O43715 76 aa7.64□□□□□ -1.19
SPCS3-204ENST00000513139 LINC00483Q53H64 154 aa7.64□□□□□ -1.19
SPCS3-204ENST00000513139 LINC00575Q6W349 94 aa7.63□□□□□ -1.19
SPCS3-204ENST00000513139 SSBP3-AS1Q7Z2R9 100 aa7.63□□□□□ -1.19
SPCS3-204ENST00000513139 BATFQ16520 125 aa7.62□□□□□ -1.19
SPCS3-204ENST00000513139 DEFB105AQ8NG35 78 aa7.62□□□□□ -1.19
SPCS3-204ENST00000513139 IGLV8-61A0A075B6I0 122 aa7.6□□□□□ -1.19
SPCS3-204ENST00000513139 hADV29S1A0JD25 119 aa7.6□□□□□ -1.19
SPCS3-204ENST00000513139 PSMB2P49721 201 aa7.6□□□□□ -1.19
SPCS3-204ENST00000513139 SVIPQ8NHG7 77 aa7.6□□□□□ -1.19
SPCS3-204ENST00000513139 FAM218AQ96MZ4 157 aa7.6□□□□□ -1.19
SPCS3-204ENST00000513139 MOBPQ13875 183 aa7.59□□□□□ -1.19
SPCS3-204ENST00000513139 PCOTHQ58A44 107 aa7.59□□□□□ -1.19
SPCS3-204ENST00000513139 H0YGX0 51 aa7.58□□□□□ -1.2
SPCS3-204ENST00000513139 M0R2T5 61 aa7.57□□□□□ -1.2
SPCS3-204ENST00000513139 LCE4AQ5TA78 99 aa7.57□□□□□ -1.2
SPCS3-204ENST00000513139 CLEC2BQ92478 149 aa7.57□□□□□ -1.2
SPCS3-204ENST00000513139 NAA38Q9BRA0 125 aaKnown RBP7.57□□□□□ -1.2
SPCS3-204ENST00000513139 IGLV9-49A0A0B4J1Y8 123 aa7.56□□□□□ -1.2
SPCS3-204ENST00000513139 SPRR1BP22528 89 aa7.56□□□□□ -1.2
SPCS3-204ENST00000513139 Q6ZQY7 126 aa7.56□□□□□ -1.2
SPCS3-204ENST00000513139 FLGP20930 4061 aaPredicted RBP7.55□□□□□ -1.2
SPCS3-204ENST00000513139 IGLV5-48A0A075B6I7 105 aa7.55□□□□□ -1.2
SPCS3-204ENST00000513139 TEX49A0A1B0GTD5 131 aa7.55□□□□□ -1.2
SPCS3-204ENST00000513139 PCP4L1A6NKN8 68 aa7.55□□□□□ -1.2
SPCS3-204ENST00000513139 SCGB1C2P0DMR2 95 aa7.54□□□□□ -1.2
SPCS3-204ENST00000513139 KRTAP9-9Q9BYP9 154 aa7.54□□□□□ -1.2
SPCS3-204ENST00000513139 KRTAP9-4Q9BYQ2 154 aa7.54□□□□□ -1.2
SPCS3-204ENST00000513139 COX6CP09669 75 aa7.53□□□□□ -1.2
SPCS3-204ENST00000513139 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.53□□□□□ -1.2
SPCS3-204ENST00000513139 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
SPCS3-204ENST00000513139 SNHG12Q9BXW3 62 aa7.53□□□□□ -1.2
SPCS3-204ENST00000513139 LAMTOR3Q9UHA4 124 aa7.51□□□□□ -1.21
SPCS3-204ENST00000513139 SNCGO76070 127 aa7.5□□□□□ -1.21
SPCS3-204ENST00000513139 C9orf153Q5TBE3 101 aa7.5□□□□□ -1.21
SPCS3-204ENST00000513139 A0A1B0GX51 115 aa7.49□□□□□ -1.21
SPCS3-204ENST00000513139 TAX1BP3O14907 124 aa7.49□□□□□ -1.21
SPCS3-204ENST00000513139 H3BUT2 72 aa7.48□□□□□ -1.21
SPCS3-204ENST00000513139 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
SPCS3-204ENST00000513139 A0A0G2JQZ4 141 aa7.46□□□□□ -1.22
SPCS3-204ENST00000513139 C9orf92A6NGG3 77 aa7.46□□□□□ -1.22
SPCS3-204ENST00000513139 LST1O00453 97 aa7.46□□□□□ -1.22
SPCS3-204ENST00000513139 TCL1BO95988 128 aa7.45□□□□□ -1.22
SPCS3-204ENST00000513139 OCIAD2Q56VL3 154 aa7.45□□□□□ -1.22
SPCS3-204ENST00000513139 LIMD2Q9BT23 127 aa7.45□□□□□ -1.22
SPCS3-204ENST00000513139 DNAL4O96015 105 aa7.44□□□□□ -1.22
SPCS3-204ENST00000513139 TRACP01848 142 aa7.44□□□□□ -1.22
SPCS3-204ENST00000513139 FABP2P12104 132 aa7.44□□□□□ -1.22
SPCS3-204ENST00000513139 PPDPFLQ8WWR9 84 aa7.44□□□□□ -1.22
SPCS3-204ENST00000513139 COL5A1-AS1Q5SY13 56 aa7.43□□□□□ -1.22
SPCS3-204ENST00000513139 ORMDL1Q9P0S3 153 aa7.43□□□□□ -1.22
SPCS3-204ENST00000513139 ATXN8Q156A1 80 aa7.42□□□□□ -1.22
SPCS3-204ENST00000513139 HRCT1Q6UXD1 115 aa7.42□□□□□ -1.22
SPCS3-204ENST00000513139 A0A1W2PPM0 123 aa7.41□□□□□ -1.22
SPCS3-204ENST00000513139 F8WEM9 126 aa7.41□□□□□ -1.22
SPCS3-204ENST00000513139 NDUFV3P56181 108 aaKnown RBP7.41□□□□□ -1.22
SPCS3-204ENST00000513139 BAALC-AS2P0C853 105 aa7.39□□□□□ -1.23
SPCS3-204ENST00000513139 A0A1B0GV72 72 aa7.38□□□□□ -1.23
SPCS3-204ENST00000513139 H3BMG7 143 aa7.38□□□□□ -1.23
SPCS3-204ENST00000513139 TMEM256-PLSCR3K7ERE1 68 aa7.38□□□□□ -1.23
SPCS3-204ENST00000513139 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
SPCS3-204ENST00000513139 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
SPCS3-204ENST00000513139 TRBV20-1A0A075B6N2 111 aa7.37□□□□□ -1.23
SPCS3-204ENST00000513139 RPL37P61927 97 aaKnown RBP7.37□□□□□ -1.23
SPCS3-204ENST00000513139 KRTAP4-8A0A0G2JLE6 195 aa7.36□□□□□ -1.23
SPCS3-204ENST00000513139 H3BQ85 93 aa7.36□□□□□ -1.23
SPCS3-204ENST00000513139 LCE1DQ5T752 114 aa7.35□□□□□ -1.23
SPCS3-204ENST00000513139 Q6JHZ5 121 aa7.35□□□□□ -1.23
SPCS3-204ENST00000513139 C9JAW5 83 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms