RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 ZNF706Q9Y5V0 76 aaPredicted RBP4.68□□□□□ -1.66
CPNE4-208ENST00000511604 F8P00451 2351 aa4.68□□□□□ -1.66
CPNE4-208ENST00000511604 FLNCQ14315 2725 aa4.68□□□□□ -1.66
CPNE4-208ENST00000511604 ITPR3Q14573 2671 aa4.67□□□□□ -1.66
CPNE4-208ENST00000511604 DEFB4AO15263 64 aa4.67□□□□□ -1.66
CPNE4-208ENST00000511604 CENPEQ02224 2701 aa4.66□□□□□ -1.66
CPNE4-208ENST00000511604 IGLV1-51P01701 117 aa4.66□□□□□ -1.66
CPNE4-208ENST00000511604 TRRAPQ9Y4A5 3859 aa4.66□□□□□ -1.66
CPNE4-208ENST00000511604 CSAG1Q6PB30 78 aa4.65□□□□□ -1.66
CPNE4-208ENST00000511604 IGLV5-37A0A075B6J1 123 aa4.65□□□□□ -1.67
CPNE4-208ENST00000511604 ANK3Q12955 4377 aaKnown RBP4.64□□□□□ -1.67
CPNE4-208ENST00000511604 C4orf3Q8WVX3 66 aa4.64□□□□□ -1.67
CPNE4-208ENST00000511604 CCL19Q99731 98 aa4.64□□□□□ -1.67
CPNE4-208ENST00000511604 C19orf73Q9NVV2 129 aa4.64□□□□□ -1.67
CPNE4-208ENST00000511604 ITPR2Q14571 2701 aa4.64□□□□□ -1.67
CPNE4-208ENST00000511604 PCOTHQ58A44 107 aa4.64□□□□□ -1.67
CPNE4-208ENST00000511604 Q6ZR54 194 aa4.64□□□□□ -1.67
CPNE4-208ENST00000511604 HRES1P13985 223 aa4.63□□□□□ -1.67
CPNE4-208ENST00000511604 RPL37AP61513 92 aaKnown RBP4.63□□□□□ -1.67
CPNE4-208ENST00000511604 OXLD1Q5BKU9 147 aa4.63□□□□□ -1.67
CPNE4-208ENST00000511604 Q6YL49 198 aa4.62□□□□□ -1.67
CPNE4-208ENST00000511604 DHRS4-AS1Q9P1J3 65 aa4.62□□□□□ -1.67
CPNE4-208ENST00000511604 C1orf134Q5TEV5 83 aa4.61□□□□□ -1.67
CPNE4-208ENST00000511604 Q6ZRX8 168 aa4.6□□□□□ -1.67
CPNE4-208ENST00000511604 PRO0255Q9UI72 69 aa4.6□□□□□ -1.67
CPNE4-208ENST00000511604 EGFEM1PQ0D2K5 195 aa4.59□□□□□ -1.67
CPNE4-208ENST00000511604 CAMK2N2Q96S95 79 aa4.59□□□□□ -1.67
CPNE4-208ENST00000511604 A0A087WSZ3 146 aa4.58□□□□□ -1.68
CPNE4-208ENST00000511604 KRTAP4-8Q9BYQ9 185 aa4.58□□□□□ -1.68
CPNE4-208ENST00000511604 CCDC168Q8NDH2 2452 aa4.58□□□□□ -1.68
CPNE4-208ENST00000511604 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
CPNE4-208ENST00000511604 RPL37AP8A6NKH3 93 aa4.57□□□□□ -1.68
CPNE4-208ENST00000511604 IGHV6-1A0A0B4J1U7 121 aa4.57□□□□□ -1.68
CPNE4-208ENST00000511604 KRTAP1-3Q8IUG1 177 aa4.57□□□□□ -1.68
CPNE4-208ENST00000511604 X6R8D5 127 aa4.57□□□□□ -1.68
CPNE4-208ENST00000511604 HIVEP1P15822 2718 aa4.57□□□□□ -1.68
CPNE4-208ENST00000511604 ROMO1P60602 79 aa4.56□□□□□ -1.68
CPNE4-208ENST00000511604 IGFL1Q6UW32 110 aa4.56□□□□□ -1.68
CPNE4-208ENST00000511604 PRR34Q9NV39 138 aa4.56□□□□□ -1.68
CPNE4-208ENST00000511604 KRTAP4-16G5E9R7 235 aaPredicted RBP4.56□□□□□ -1.68
CPNE4-208ENST00000511604 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
CPNE4-208ENST00000511604 VWFP04275 2813 aa4.56□□□□□ -1.68
CPNE4-208ENST00000511604 A8MWP4 228 aa4.55□□□□□ -1.68
CPNE4-208ENST00000511604 HTN3P15516 51 aa4.55□□□□□ -1.68
CPNE4-208ENST00000511604 DNHD1Q96M86 4753 aa4.55□□□□□ -1.68
CPNE4-208ENST00000511604 PKD1L1Q8TDX9 2849 aa4.55□□□□□ -1.68
CPNE4-208ENST00000511604 DEFB131BA0A096LNP1 70 aa4.55□□□□□ -1.68
CPNE4-208ENST00000511604 FAM168BA1KXE4 195 aa4.55□□□□□ -1.68
CPNE4-208ENST00000511604 IGKV2-24A0A0C4DH68 120 aa4.54□□□□□ -1.68
CPNE4-208ENST00000511604 PDZD2O15018 2839 aa4.54□□□□□ -1.68
CPNE4-208ENST00000511604 SRRM2Q9UQ35 2752 aaKnown RBP4.54□□□□□ -1.68
CPNE4-208ENST00000511604 MMP24-AS1A0A0U1RRL7 71 aa4.53□□□□□ -1.68
CPNE4-208ENST00000511604 MTORP42345 2549 aa4.53□□□□□ -1.68
CPNE4-208ENST00000511604 SPRR1AP35321 89 aa4.52□□□□□ -1.69
CPNE4-208ENST00000511604 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
CPNE4-208ENST00000511604 REG3GQ6UW15 175 aa4.52□□□□□ -1.69
CPNE4-208ENST00000511604 C15orf56Q8N910 161 aa4.52□□□□□ -1.69
CPNE4-208ENST00000511604 HIVEP2P31629 2446 aa4.52□□□□□ -1.69
CPNE4-208ENST00000511604 KRTAP26-1Q6PEX3 210 aa4.52□□□□□ -1.69
CPNE4-208ENST00000511604 KRTAP7-1Q8IUC3 87 aa4.51□□□□□ -1.69
CPNE4-208ENST00000511604 TP53AIP1Q9HCN2 124 aa4.51□□□□□ -1.69
CPNE4-208ENST00000511604 A0A1B0GU69 56 aa4.51□□□□□ -1.69
CPNE4-208ENST00000511604 CMC4P56277 68 aaPredicted RBP4.51□□□□□ -1.69
CPNE4-208ENST00000511604 DEFB135Q30KP9 77 aa4.51□□□□□ -1.69
CPNE4-208ENST00000511604 LINC00472Q9H8W2 130 aa4.5□□□□□ -1.69
CPNE4-208ENST00000511604 ZNF861PO60384 105 aa4.5□□□□□ -1.69
CPNE4-208ENST00000511604 LELP1Q5T871 98 aa4.5□□□□□ -1.69
CPNE4-208ENST00000511604 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
CPNE4-208ENST00000511604 UQCR11O14957 56 aa4.49□□□□□ -1.69
CPNE4-208ENST00000511604 IGLV8-61A0A075B6I0 122 aa4.49□□□□□ -1.69
CPNE4-208ENST00000511604 KRTAP10-9P60411 292 aa4.49□□□□□ -1.69
CPNE4-208ENST00000511604 KRTAP5-3Q6L8H2 238 aa4.49□□□□□ -1.69
CPNE4-208ENST00000511604 ACANP16112 2415 aa4.47□□□□□ -1.69
CPNE4-208ENST00000511604 TENM2Q9NT68 2774 aa4.47□□□□□ -1.69
CPNE4-208ENST00000511604 ACYP2P14621 99 aa4.46□□□□□ -1.7
CPNE4-208ENST00000511604 KRTAP25-1Q3LHN0 102 aa4.46□□□□□ -1.7
CPNE4-208ENST00000511604 PLA2G2DQ9UNK4 145 aa4.46□□□□□ -1.7
CPNE4-208ENST00000511604 ALMS1Q8TCU4 4167 aa4.45□□□□□ -1.7
CPNE4-208ENST00000511604 P0C880 135 aa4.45□□□□□ -1.7
CPNE4-208ENST00000511604 CASC10Q5T4H9 136 aa4.44□□□□□ -1.7
CPNE4-208ENST00000511604 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
CPNE4-208ENST00000511604 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
CPNE4-208ENST00000511604 KRTAP10-3P60369 221 aa4.43□□□□□ -1.7
CPNE4-208ENST00000511604 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
CPNE4-208ENST00000511604 PRLHP81277 87 aa4.42□□□□□ -1.7
CPNE4-208ENST00000511604 ANK2Q01484 3957 aa4.42□□□□□ -1.7
CPNE4-208ENST00000511604 A0A096LNI7 61 aa4.42□□□□□ -1.7
CPNE4-208ENST00000511604 DEFB113Q30KQ7 82 aa4.41□□□□□ -1.7
CPNE4-208ENST00000511604 FLNAP21333 2647 aaKnown RBP4.41□□□□□ -1.7
CPNE4-208ENST00000511604 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
CPNE4-208ENST00000511604 TLX1NBP0CAT3 122 aa4.41□□□□□ -1.7
CPNE4-208ENST00000511604 C8orf17Q9NRJ1 99 aa4.41□□□□□ -1.7
CPNE4-208ENST00000511604 COL7A1Q02388 2944 aa4.41□□□□□ -1.7
CPNE4-208ENST00000511604 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.4□□□□□ -1.7
CPNE4-208ENST00000511604 DMAC1Q96GE9 116 aa4.4□□□□□ -1.7
CPNE4-208ENST00000511604 LYSTQ99698 3801 aa4.4□□□□□ -1.7
CPNE4-208ENST00000511604 K7EIL1 84 aa4.4□□□□□ -1.71
CPNE4-208ENST00000511604 KRTAP9-2Q9BYQ4 174 aa4.4□□□□□ -1.71
CPNE4-208ENST00000511604 IGLV5-52A0A0A0MRZ9 124 aa4.39□□□□□ -1.71
CPNE4-208ENST00000511604 KRTAP4-7Q9BYR0 210 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 198.2 ms