RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 NUPR2A6NF83 97 aa9.6□□□□□ -0.87
USP38-202ENST00000510377 PMAIP1Q13794 54 aa9.6□□□□□ -0.87
USP38-202ENST00000510377 VPS13CQ709C8 3753 aa9.6□□□□□ -0.87
USP38-202ENST00000510377 IGLV5-48A0A075B6I7 105 aa9.59□□□□□ -0.87
USP38-202ENST00000510377 K7EIL1 84 aa9.59□□□□□ -0.87
USP38-202ENST00000510377 IGHV6-1A0A0B4J1U7 121 aa9.58□□□□□ -0.88
USP38-202ENST00000510377 A8MUN3 132 aa9.58□□□□□ -0.88
USP38-202ENST00000510377 VWFP04275 2813 aa9.57□□□□□ -0.88
USP38-202ENST00000510377 A0A1B0GW54 56 aa9.56□□□□□ -0.88
USP38-202ENST00000510377 DSCR10P59022 87 aa9.55□□□□□ -0.88
USP38-202ENST00000510377 hDV103S1A0JD37 113 aa9.54□□□□□ -0.88
USP38-202ENST00000510377 WIPF1O43516 503 aa9.54□□□□□ -0.88
USP38-202ENST00000510377 KRTAP26-1Q6PEX3 210 aa9.52□□□□□ -0.88
USP38-202ENST00000510377 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
USP38-202ENST00000510377 STAB2Q8WWQ8 2551 aa9.49□□□□□ -0.89
USP38-202ENST00000510377 TLX1NBP0CAT3 122 aa9.49□□□□□ -0.89
USP38-202ENST00000510377 TRAV22A0A0B4J277 110 aa9.49□□□□□ -0.89
USP38-202ENST00000510377 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
USP38-202ENST00000510377 RETNLBQ9BQ08 111 aa9.46□□□□□ -0.9
USP38-202ENST00000510377 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
USP38-202ENST00000510377 SPAG11AQ6PDA7 123 aa9.46□□□□□ -0.9
USP38-202ENST00000510377 SPRR4Q96PI1 79 aa9.44□□□□□ -0.9
USP38-202ENST00000510377 PRR15Q8IV56 129 aa9.43□□□□□ -0.9
USP38-202ENST00000510377 CIRBP-AS1Q8TBR5 109 aa9.43□□□□□ -0.9
USP38-202ENST00000510377 A8MWP4 228 aa9.43□□□□□ -0.9
USP38-202ENST00000510377 SEC61GP60059 68 aa9.43□□□□□ -0.9
USP38-202ENST00000510377 TENM3Q9P273 2699 aa9.43□□□□□ -0.9
USP38-202ENST00000510377 MOBPQ13875 183 aa9.42□□□□□ -0.9
USP38-202ENST00000510377 LIMD2Q9BT23 127 aa9.41□□□□□ -0.9
USP38-202ENST00000510377 PDZD2O15018 2839 aa9.41□□□□□ -0.9
USP38-202ENST00000510377 C1orf134Q5TEV5 83 aa9.4□□□□□ -0.91
USP38-202ENST00000510377 IGLV5-37A0A075B6J1 123 aa9.38□□□□□ -0.91
USP38-202ENST00000510377 SPRR1AP35321 89 aa9.38□□□□□ -0.91
USP38-202ENST00000510377 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
USP38-202ENST00000510377 COA5Q86WW8 74 aa9.37□□□□□ -0.91
USP38-202ENST00000510377 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
USP38-202ENST00000510377 OTOGQ6ZRI0 2925 aa9.37□□□□□ -0.91
USP38-202ENST00000510377 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
USP38-202ENST00000510377 PKD1L1Q8TDX9 2849 aa9.35□□□□□ -0.91
USP38-202ENST00000510377 TNP2Q05952 138 aa9.34□□□□□ -0.91
USP38-202ENST00000510377 H3BPC8 53 aa9.33□□□□□ -0.92
USP38-202ENST00000510377 NBPF19A0A087WUL8 3843 aa9.33□□□□□ -0.92
USP38-202ENST00000510377 IGLV5-52A0A0A0MRZ9 124 aa9.32□□□□□ -0.92
USP38-202ENST00000510377 KRTAP4-16G5E9R7 235 aaPredicted RBP9.32□□□□□ -0.92
USP38-202ENST00000510377 Q1T7F1 81 aa9.3□□□□□ -0.92
USP38-202ENST00000510377 CNBPP62633 177 aaKnown RBP9.29□□□□□ -0.92
USP38-202ENST00000510377 TP53AIP1Q9HCN2 124 aa9.29□□□□□ -0.92
USP38-202ENST00000510377 NBDYA0A0U1RRE5 68 aa9.28□□□□□ -0.92
USP38-202ENST00000510377 KRTAP7-1Q8IUC3 87 aa9.28□□□□□ -0.92
USP38-202ENST00000510377 KRTAP1-5Q9BYS1 174 aa9.28□□□□□ -0.92
USP38-202ENST00000510377 FBN1P35555 2871 aaKnown RBP9.27□□□□□ -0.93
USP38-202ENST00000510377 C8orf17Q9NRJ1 99 aa9.27□□□□□ -0.93
USP38-202ENST00000510377 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.93
USP38-202ENST00000510377 C9orf163Q8N9P6 203 aa9.26□□□□□ -0.93
USP38-202ENST00000510377 C4orf48Q5BLP8 95 aa9.24□□□□□ -0.93
USP38-202ENST00000510377 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
USP38-202ENST00000510377 SPANXA2-OT1Q8N9U9 137 aa9.2□□□□□ -0.94
USP38-202ENST00000510377 ZCCHC13Q8WW36 166 aaKnown RBP9.2□□□□□ -0.94
USP38-202ENST00000510377 SPINK1P00995 79 aa9.2□□□□□ -0.94
USP38-202ENST00000510377 Q8N9P0 234 aaPredicted RBP9.19□□□□□ -0.94
USP38-202ENST00000510377 LOC101927531A0A1B0GV80 90 aa9.19□□□□□ -0.94
USP38-202ENST00000510377 A0A1B0GVX0 72 aa9.19□□□□□ -0.94
USP38-202ENST00000510377 RTL8CO15255 209 aa9.19□□□□□ -0.94
USP38-202ENST00000510377 IGKV2D-30A0A075B6S6 120 aa9.18□□□□□ -0.94
USP38-202ENST00000510377 IGKV2-30P06310 120 aa9.18□□□□□ -0.94
USP38-202ENST00000510377 MMP24-AS1A0A0U1RRL7 71 aa9.18□□□□□ -0.94
USP38-202ENST00000510377 LINC00472Q9H8W2 130 aa9.17□□□□□ -0.94
USP38-202ENST00000510377 KRTAP11-1Q8IUC1 163 aa9.17□□□□□ -0.94
USP38-202ENST00000510377 Q5VV11 94 aa9.16□□□□□ -0.94
USP38-202ENST00000510377 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.16□□□□□ -0.94
USP38-202ENST00000510377 PRR26Q8N8Z3 221 aa9.16□□□□□ -0.94
USP38-202ENST00000510377 PSORS1C2Q9UIG4 136 aa9.15□□□□□ -0.94
USP38-202ENST00000510377 APLNQ9ULZ1 77 aa9.15□□□□□ -0.95
USP38-202ENST00000510377 A8MU10 97 aa9.13□□□□□ -0.95
USP38-202ENST00000510377 IGLV8-61A0A075B6I0 122 aa9.13□□□□□ -0.95
USP38-202ENST00000510377 ACYP2P14621 99 aa9.12□□□□□ -0.95
USP38-202ENST00000510377 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
USP38-202ENST00000510377 PANO1I0J062 215 aa9.12□□□□□ -0.95
USP38-202ENST00000510377 CD164Q04900 197 aa9.12□□□□□ -0.95
USP38-202ENST00000510377 SPACA4Q8TDM5 124 aa9.11□□□□□ -0.95
USP38-202ENST00000510377 A0A1B0GU69 56 aa9.1□□□□□ -0.95
USP38-202ENST00000510377 IGLV7-46A0A075B6I9 117 aa9.1□□□□□ -0.95
USP38-202ENST00000510377 ZNF469Q96JG9 3925 aaPredicted RBP9.09□□□□□ -0.95
USP38-202ENST00000510377 LCE6AA0A183 80 aa9.09□□□□□ -0.95
USP38-202ENST00000510377 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
USP38-202ENST00000510377 A0A087WTM6 91 aa9.08□□□□□ -0.96
USP38-202ENST00000510377 ZNF861PO60384 105 aa9.08□□□□□ -0.96
USP38-202ENST00000510377 TRRAPQ9Y4A5 3859 aa9.08□□□□□ -0.96
USP38-202ENST00000510377 LINC00313P59037 77 aa9.07□□□□□ -0.96
USP38-202ENST00000510377 SPRR1BP22528 89 aa9.06□□□□□ -0.96
USP38-202ENST00000510377 KTN1-AS1Q86SY8 53 aa9.05□□□□□ -0.96
USP38-202ENST00000510377 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
USP38-202ENST00000510377 CDC42SE1Q9NRR8 79 aa9.01□□□□□ -0.97
USP38-202ENST00000510377 HRES1P13985 223 aa9.01□□□□□ -0.97
USP38-202ENST00000510377 TENM2Q9NT68 2774 aa9.01□□□□□ -0.97
USP38-202ENST00000510377 Q75L30 129 aa9□□□□□ -0.97
USP38-202ENST00000510377 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
USP38-202ENST00000510377 SPINK7P58062 85 aa8.99□□□□□ -0.97
USP38-202ENST00000510377 A0A087X002 238 aa8.98□□□□□ -0.97
USP38-202ENST00000510377 NOTCH2NLQ7Z3S9 236 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms