RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 IGF2RP11717 2491 aa2.96□□□□□ -1.94
PDCD4-211ENST00000498367 USF3Q68DE3 2245 aa2.95□□□□□ -1.94
PDCD4-211ENST00000498367 DEFB106AQ8N104 65 aa2.95□□□□□ -1.94
PDCD4-211ENST00000498367 PCNX1Q96RV3 2341 aa2.93□□□□□ -1.94
PDCD4-211ENST00000498367 KRTAP13-1Q8IUC0 172 aa2.93□□□□□ -1.94
PDCD4-211ENST00000498367 KLK9Q2XQG4 91 aa2.91□□□□□ -1.94
PDCD4-211ENST00000498367 RPL39P5Q59GN2 51 aa2.91□□□□□ -1.94
PDCD4-211ENST00000498367 FBN1P35555 2871 aaKnown RBP2.89□□□□□ -1.95
PDCD4-211ENST00000498367 J3QKU1 62 aa2.88□□□□□ -1.95
PDCD4-211ENST00000498367 KRTAP10-10P60014 251 aa2.88□□□□□ -1.95
PDCD4-211ENST00000498367 DEFB104AQ8WTQ1 72 aa2.87□□□□□ -1.95
PDCD4-211ENST00000498367 C2CD3Q4AC94 2353 aa2.86□□□□□ -1.95
PDCD4-211ENST00000498367 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
PDCD4-211ENST00000498367 REV3LO60673 3130 aa2.86□□□□□ -1.95
PDCD4-211ENST00000498367 DEFB108AA8MXU0 73 aa2.84□□□□□ -1.95
PDCD4-211ENST00000498367 A0A0C4DFX4 3053 aa2.84□□□□□ -1.96
PDCD4-211ENST00000498367 A0A0D9SG42 100 aa2.83□□□□□ -1.96
PDCD4-211ENST00000498367 KRTAP5-5Q701N2 237 aaPredicted RBP2.83□□□□□ -1.96
PDCD4-211ENST00000498367 SPINK1P00995 79 aa2.82□□□□□ -1.96
PDCD4-211ENST00000498367 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
PDCD4-211ENST00000498367 ASH1LQ9NR48 2969 aaKnown RBP2.8□□□□□ -1.96
PDCD4-211ENST00000498367 DSPP15924 2871 aaKnown RBP2.79□□□□□ -1.96
PDCD4-211ENST00000498367 CSPG4Q6UVK1 2322 aa2.79□□□□□ -1.96
PDCD4-211ENST00000498367 SPTBN2O15020 2390 aa2.78□□□□□ -1.96
PDCD4-211ENST00000498367 SPTBN1Q01082 2364 aaKnown RBP2.74□□□□□ -1.97
PDCD4-211ENST00000498367 HIVEP2P31629 2446 aa2.72□□□□□ -1.97
PDCD4-211ENST00000498367 ABCA2Q9BZC7 2435 aa2.72□□□□□ -1.97
PDCD4-211ENST00000498367 TRANK1O15050 2925 aa2.72□□□□□ -1.97
PDCD4-211ENST00000498367 MUC6Q6W4X9 2439 aa2.71□□□□□ -1.98
PDCD4-211ENST00000498367 KRTAP21-3Q3LHN1 58 aa2.71□□□□□ -1.98
PDCD4-211ENST00000498367 M0QZ58 72 aa2.7□□□□□ -1.98
PDCD4-211ENST00000498367 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
PDCD4-211ENST00000498367 MEGF8Q7Z7M0 2845 aa2.68□□□□□ -1.98
PDCD4-211ENST00000498367 LCE1CQ5T751 118 aa2.66□□□□□ -1.98
PDCD4-211ENST00000498367 LCE1BQ5T7P3 118 aa2.66□□□□□ -1.98
PDCD4-211ENST00000498367 AKAP6Q13023 2319 aa2.65□□□□□ -1.98
PDCD4-211ENST00000498367 RP1L1Q8IWN7 2480 aaPredicted RBP2.65□□□□□ -1.98
PDCD4-211ENST00000498367 H0YGG7 62 aa2.65□□□□□ -1.99
PDCD4-211ENST00000498367 H3BUX3 64 aa2.65□□□□□ -1.99
PDCD4-211ENST00000498367 F8P00451 2351 aa2.64□□□□□ -1.99
PDCD4-211ENST00000498367 CELSR2Q9HCU4 2923 aa2.63□□□□□ -1.99
PDCD4-211ENST00000498367 ABCA12Q86UK0 2595 aa2.62□□□□□ -1.99
PDCD4-211ENST00000498367 CACNA1HO95180 2353 aa2.6□□□□□ -1.99
PDCD4-211ENST00000498367 WNK1Q9H4A3 2382 aa2.6□□□□□ -1.99
PDCD4-211ENST00000498367 CHD7Q9P2D1 2997 aa2.59□□□□□ -1.99
PDCD4-211ENST00000498367 ZNF292O60281 2723 aa2.59□□□□□ -1.99
PDCD4-211ENST00000498367 GVINP1Q7Z2Y8 2422 aa2.58□□□□□ -2
PDCD4-211ENST00000498367 CEP290O15078 2479 aa2.54□□□□□ -2
PDCD4-211ENST00000498367 SPTA1P02549 2419 aa2.54□□□□□ -2
PDCD4-211ENST00000498367 PRRC2CQ9Y520 2896 aaKnown RBP2.54□□□□□ -2
PDCD4-211ENST00000498367 APELAP0DMC3 54 aa2.52□□□□□ -2.01
PDCD4-211ENST00000498367 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
PDCD4-211ENST00000498367 PKD1L2Q7Z442 2459 aa2.51□□□□□ -2.01
PDCD4-211ENST00000498367 TTC28Q96AY4 2481 aa2.5□□□□□ -2.01
PDCD4-211ENST00000498367 DEFB135Q30KP9 77 aa2.5□□□□□ -2.01
PDCD4-211ENST00000498367 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
PDCD4-211ENST00000498367 SRRM2Q9UQ35 2752 aaKnown RBP2.49□□□□□ -2.01
PDCD4-211ENST00000498367 UBR5O95071 2799 aaPredicted RBP2.49□□□□□ -2.01
PDCD4-211ENST00000498367 ACACAQ13085 2346 aa2.47□□□□□ -2.01
PDCD4-211ENST00000498367 CHD9Q3L8U1 2897 aa2.47□□□□□ -2.01
PDCD4-211ENST00000498367 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
PDCD4-211ENST00000498367 RHPN1-AS1Q9BWJ2 59 aa2.47□□□□□ -2.01
PDCD4-211ENST00000498367 POLQO75417 2590 aa2.46□□□□□ -2.02
PDCD4-211ENST00000498367 OTOGQ6ZRI0 2925 aa2.45□□□□□ -2.02
PDCD4-211ENST00000498367 MGAQ8IWI9 3026 aa2.44□□□□□ -2.02
PDCD4-211ENST00000498367 TENM2Q9NT68 2774 aa2.44□□□□□ -2.02
PDCD4-211ENST00000498367 VWFP04275 2813 aa2.44□□□□□ -2.02
PDCD4-211ENST00000498367 TNP1P09430 55 aa2.43□□□□□ -2.02
PDCD4-211ENST00000498367 STATHP02808 62 aa2.42□□□□□ -2.02
PDCD4-211ENST00000498367 HECTD1Q9ULT8 2610 aa2.41□□□□□ -2.02
PDCD4-211ENST00000498367 EP300Q09472 2414 aaPredicted RBP2.41□□□□□ -2.02
PDCD4-211ENST00000498367 HTN1P15515 57 aa2.4□□□□□ -2.03
PDCD4-211ENST00000498367 M0R2T5 61 aa2.39□□□□□ -2.03
PDCD4-211ENST00000498367 COX14Q96I36 57 aa2.39□□□□□ -2.03
PDCD4-211ENST00000498367 COL6A5A8TX70 2615 aa2.38□□□□□ -2.03
PDCD4-211ENST00000498367 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
PDCD4-211ENST00000498367 AKAP13Q12802 2813 aa2.38□□□□□ -2.03
PDCD4-211ENST00000498367 SPTBN4Q9H254 2564 aa2.37□□□□□ -2.03
PDCD4-211ENST00000498367 SPART-AS1P0CW21 52 aa2.36□□□□□ -2.03
PDCD4-211ENST00000498367 DEFB1P60022 68 aa2.36□□□□□ -2.03
PDCD4-211ENST00000498367 CELSR1Q9NYQ6 3014 aa2.35□□□□□ -2.03
PDCD4-211ENST00000498367 NAV2Q8IVL1 2488 aa2.34□□□□□ -2.03
PDCD4-211ENST00000498367 CREBBPQ92793 2442 aa2.34□□□□□ -2.03
PDCD4-211ENST00000498367 TENM4Q6N022 2769 aa2.33□□□□□ -2.04
PDCD4-211ENST00000498367 SPINK6Q6UWN8 80 aa2.3□□□□□ -2.04
PDCD4-211ENST00000498367 ATRQ13535 2644 aa2.3□□□□□ -2.04
PDCD4-211ENST00000498367 CSMD3Q7Z407 3707 aa2.29□□□□□ -2.04
PDCD4-211ENST00000498367 CCDC168Q8NDH2 2452 aa2.29□□□□□ -2.04
PDCD4-211ENST00000498367 NCOR1O75376 2440 aa2.29□□□□□ -2.04
PDCD4-211ENST00000498367 APC2O95996 2303 aa2.29□□□□□ -2.04
PDCD4-211ENST00000498367 SETD2Q9BYW2 2564 aaPredicted RBP2.27□□□□□ -2.05
PDCD4-211ENST00000498367 DMBT1Q9UGM3 2413 aaPredicted RBP2.27□□□□□ -2.05
PDCD4-211ENST00000498367 CRYBG3Q68DQ2 2970 aa2.25□□□□□ -2.05
PDCD4-211ENST00000498367 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
PDCD4-211ENST00000498367 DEFB124Q8NES8 71 aa2.25□□□□□ -2.05
PDCD4-211ENST00000498367 Q9Y3F1 56 aa2.24□□□□□ -2.05
PDCD4-211ENST00000498367 TNRC18O15417 2968 aaPredicted RBP2.24□□□□□ -2.05
PDCD4-211ENST00000498367 CHD6Q8TD26 2715 aa2.23□□□□□ -2.05
PDCD4-211ENST00000498367 A0A096LNI7 61 aa2.23□□□□□ -2.05
PDCD4-211ENST00000498367 DEFB136Q30KP8 78 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms