RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 H7C2G1 150 aa9.11□□□□□ -0.95
TRAPPC3-207ENST00000497251 DEFB105AQ8NG35 78 aa9.11□□□□□ -0.95
TRAPPC3-207ENST00000497251 C9orf92A6NGG3 77 aa9.1□□□□□ -0.95
TRAPPC3-207ENST00000497251 SPATA45Q537H7 98 aa9.1□□□□□ -0.95
TRAPPC3-207ENST00000497251 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
TRAPPC3-207ENST00000497251 PAM16Q9Y3D7 125 aa9.1□□□□□ -0.95
TRAPPC3-207ENST00000497251 Q1RN00 199 aa9.09□□□□□ -0.95
TRAPPC3-207ENST00000497251 HIGD1BQ9P298 99 aa9.09□□□□□ -0.95
TRAPPC3-207ENST00000497251 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
TRAPPC3-207ENST00000497251 C14orf144Q96I85 54 aa9.08□□□□□ -0.96
TRAPPC3-207ENST00000497251 LINC00575Q6W349 94 aa9.07□□□□□ -0.96
TRAPPC3-207ENST00000497251 C12orf57Q99622 126 aa9.05□□□□□ -0.96
TRAPPC3-207ENST00000497251 LORP23490 312 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC3-207ENST00000497251 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
TRAPPC3-207ENST00000497251 C1orf195Q5TG92 126 aa9.04□□□□□ -0.96
TRAPPC3-207ENST00000497251 hADV29S1A0JD25 119 aa9.03□□□□□ -0.96
TRAPPC3-207ENST00000497251 C2orf91Q6ZV80 131 aa9.03□□□□□ -0.96
TRAPPC3-207ENST00000497251 KRTAP10-6P60371 365 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC3-207ENST00000497251 RPL37P61927 97 aaKnown RBP9.02□□□□□ -0.97
TRAPPC3-207ENST00000497251 A0A0B4J2C4 111 aa9.01□□□□□ -0.97
TRAPPC3-207ENST00000497251 TCL1BO95988 128 aa9.01□□□□□ -0.97
TRAPPC3-207ENST00000497251 CFC1P0CG37 223 aa9.01□□□□□ -0.97
TRAPPC3-207ENST00000497251 Q6ZQY7 126 aa9□□□□□ -0.97
TRAPPC3-207ENST00000497251 RAB37Q96AX2 223 aa9□□□□□ -0.97
TRAPPC3-207ENST00000497251 M0R2T5 61 aa8.99□□□□□ -0.97
TRAPPC3-207ENST00000497251 PYY3Q5JQD4 70 aa8.99□□□□□ -0.97
TRAPPC3-207ENST00000497251 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC3-207ENST00000497251 F8WEM9 126 aa8.98□□□□□ -0.97
TRAPPC3-207ENST00000497251 COX6B2Q6YFQ2 88 aa8.98□□□□□ -0.97
TRAPPC3-207ENST00000497251 CEND1Q8N111 149 aa8.98□□□□□ -0.97
TRAPPC3-207ENST00000497251 PPDPFLQ8WWR9 84 aa8.97□□□□□ -0.97
TRAPPC3-207ENST00000497251 TMEM238LA0A1B0GVL6 79 aa8.96□□□□□ -0.98
TRAPPC3-207ENST00000497251 A6NJY4 79 aa8.96□□□□□ -0.98
TRAPPC3-207ENST00000497251 H0YGX0 51 aa8.94□□□□□ -0.98
TRAPPC3-207ENST00000497251 SNCGO76070 127 aa8.93□□□□□ -0.98
TRAPPC3-207ENST00000497251 Q6JHZ5 121 aa8.93□□□□□ -0.98
TRAPPC3-207ENST00000497251 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
TRAPPC3-207ENST00000497251 PRO1854Q9UHT4 67 aa8.92□□□□□ -0.98
TRAPPC3-207ENST00000497251 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
TRAPPC3-207ENST00000497251 A0A0G2JQZ4 141 aa8.91□□□□□ -0.98
TRAPPC3-207ENST00000497251 OCIAD2Q56VL3 154 aa8.91□□□□□ -0.98
TRAPPC3-207ENST00000497251 FXYD2P54710 66 aa8.9□□□□□ -0.98
TRAPPC3-207ENST00000497251 CLEC2BQ92478 149 aa8.9□□□□□ -0.98
TRAPPC3-207ENST00000497251 HSD52Q0P140 79 aa8.89□□□□□ -0.99
TRAPPC3-207ENST00000497251 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
TRAPPC3-207ENST00000497251 A0A1B0GX51 115 aa8.88□□□□□ -0.99
TRAPPC3-207ENST00000497251 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
TRAPPC3-207ENST00000497251 FAM218AQ96MZ4 157 aa8.86□□□□□ -0.99
TRAPPC3-207ENST00000497251 UQCR10Q9UDW1 63 aa8.86□□□□□ -0.99
TRAPPC3-207ENST00000497251 GHRHP01286 108 aa8.85□□□□□ -0.99
TRAPPC3-207ENST00000497251 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
TRAPPC3-207ENST00000497251 TRBV7-7A0A0K0K1E9 115 aa8.84□□□□□ -0.99
TRAPPC3-207ENST00000497251 Q75L30 129 aa8.84□□□□□ -0.99
TRAPPC3-207ENST00000497251 TRIAP1O43715 76 aa8.82□□□□□ -1
TRAPPC3-207ENST00000497251 H3BUT2 72 aa8.8□□□□□ -1
TRAPPC3-207ENST00000497251 NDUFV3P56181 108 aaKnown RBP8.8□□□□□ -1
TRAPPC3-207ENST00000497251 Q6Q795 121 aa8.78□□□□□ -1
TRAPPC3-207ENST00000497251 K7ERJ3 54 aa8.77□□□□□ -1.01
TRAPPC3-207ENST00000497251 COX6CP09669 75 aa8.77□□□□□ -1.01
TRAPPC3-207ENST00000497251 PSMB2P49721 201 aa8.77□□□□□ -1.01
TRAPPC3-207ENST00000497251 H3BQ85 93 aa8.76□□□□□ -1.01
TRAPPC3-207ENST00000497251 OBSCN-AS1Q96MR7 158 aa8.76□□□□□ -1.01
TRAPPC3-207ENST00000497251 DNAL4O96015 105 aa8.75□□□□□ -1.01
TRAPPC3-207ENST00000497251 TEN1Q86WV5 123 aa8.75□□□□□ -1.01
TRAPPC3-207ENST00000497251 H3BMG7 143 aa8.74□□□□□ -1.01
TRAPPC3-207ENST00000497251 LST1O00453 97 aa8.74□□□□□ -1.01
TRAPPC3-207ENST00000497251 FABP2P12104 132 aa8.74□□□□□ -1.01
TRAPPC3-207ENST00000497251 SS18L2Q9UHA2 77 aa8.74□□□□□ -1.01
TRAPPC3-207ENST00000497251 ORMDL1Q9P0S3 153 aa8.73□□□□□ -1.01
TRAPPC3-207ENST00000497251 TMEM256-PLSCR3K7ERE1 68 aa8.69□□□□□ -1.02
TRAPPC3-207ENST00000497251 C20orf166-AS1Q96NR2 134 aa8.69□□□□□ -1.02
TRAPPC3-207ENST00000497251 TRBV20-1A0A075B6N2 111 aa8.68□□□□□ -1.02
TRAPPC3-207ENST00000497251 Q96NJ1 140 aa8.68□□□□□ -1.02
TRAPPC3-207ENST00000497251 TRACP01848 142 aa8.67□□□□□ -1.02
TRAPPC3-207ENST00000497251 SMIM6P0DI80 62 aa8.67□□□□□ -1.02
TRAPPC3-207ENST00000497251 A0A087WSZ3 146 aa8.66□□□□□ -1.02
TRAPPC3-207ENST00000497251 A8MUU9 505 aa8.64□□□□□ -1.03
TRAPPC3-207ENST00000497251 M0R143 59 aa8.64□□□□□ -1.03
TRAPPC3-207ENST00000497251 SCGB1C2P0DMR2 95 aa8.64□□□□□ -1.03
TRAPPC3-207ENST00000497251 UBE2V1Q13404 147 aa8.64□□□□□ -1.03
TRAPPC3-207ENST00000497251 ANKRD29Q8N6D5 301 aa8.64□□□□□ -1.03
TRAPPC3-207ENST00000497251 A0A1W2PNM2 257 aa8.63□□□□□ -1.03
TRAPPC3-207ENST00000497251 TRBV7-4A0A0J9YYF1 115 aa8.62□□□□□ -1.03
TRAPPC3-207ENST00000497251 KRTAP9-8Q9BYQ0 159 aa8.61□□□□□ -1.03
TRAPPC3-207ENST00000497251 A0A1B0GV72 72 aa8.58□□□□□ -1.04
TRAPPC3-207ENST00000497251 KRTAP9-7A8MTY7 169 aa8.57□□□□□ -1.04
TRAPPC3-207ENST00000497251 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC3-207ENST00000497251 CCKP06307 115 aa8.56□□□□□ -1.04
TRAPPC3-207ENST00000497251 TSTD3H0UI37 97 aa8.55□□□□□ -1.04
TRAPPC3-207ENST00000497251 RBM3P98179 157 aaKnown RBP8.54□□□□□ -1.04
TRAPPC3-207ENST00000497251 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
TRAPPC3-207ENST00000497251 ATXN8Q156A1 80 aa8.53□□□□□ -1.04
TRAPPC3-207ENST00000497251 DSCR8Q96T75 97 aa8.52□□□□□ -1.05
TRAPPC3-207ENST00000497251 SIGMAR1Q99720 223 aa8.52□□□□□ -1.05
TRAPPC3-207ENST00000497251 IGKV4-1P06312 121 aa8.5□□□□□ -1.05
TRAPPC3-207ENST00000497251 LINC00472Q9H8W2 130 aa8.5□□□□□ -1.05
TRAPPC3-207ENST00000497251 USH2AO75445 5202 aa8.5□□□□□ -1.05
TRAPPC3-207ENST00000497251 LINC00313P59037 77 aa8.49□□□□□ -1.05
TRAPPC3-207ENST00000497251 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
TRAPPC3-207ENST00000497251 LYRM7Q5U5X0 104 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms