RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 LEAP2Q969E1 77 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 RPL39LQ96EH5 51 aaKnown RBP0.57□□□□□ -2.32
LMNB1-207ENST00000494185 TP53AIP1Q9HCN2 124 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 C2CD3Q4AC94 2353 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 CSMD3Q7Z407 3707 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 BSNQ9UPA5 3926 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 MYCBP2O75592 4640 aa0.57□□□□□ -2.32
LMNB1-207ENST00000494185 GCC2Q8IWJ2 1684 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 PKDREJQ9NTG1 2253 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 SPRR1AP35321 89 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 H1FX-AS1Q4G0G2 97 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 MINOS1Q5TGZ0 78 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 WFDC13Q8IUB5 93 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 C6orf48Q9UBA6 75 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 PRKDCP78527 4128 aaKnown RBP0.56□□□□□ -2.32
LMNB1-207ENST00000494185 TPRP12270 2363 aaKnown RBP0.56□□□□□ -2.32
LMNB1-207ENST00000494185 SPTBN1Q01082 2364 aaKnown RBP0.56□□□□□ -2.32
LMNB1-207ENST00000494185 TRANK1O15050 2925 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 CHD7Q9P2D1 2997 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 USF3Q68DE3 2245 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 LMO7Q8WWI1 1683 aa0.56□□□□□ -2.32
LMNB1-207ENST00000494185 LRRC37AA6NMS7 1700 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 SPTBN2O15020 2390 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 GVINP1Q7Z2Y8 2422 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 ZNF462Q96JM2 2506 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 CCL22O00626 93 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 OTOGQ6ZRI0 2925 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 FAT2Q9NYQ8 4349 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 TNRC6CQ9HCJ0 1690 aaKnown RBP0.55□□□□□ -2.32
LMNB1-207ENST00000494185 F8P00451 2351 aa0.55□□□□□ -2.32
LMNB1-207ENST00000494185 ZNF292O60281 2723 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 M0QY20 66 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 WFDC10BQ8IUB3 73 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 USMG5Q96IX5 58 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 KAAG1Q9UBP8 84 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 APLNQ9ULZ1 77 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 ABCA12Q86UK0 2595 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 DNAH8Q96JB1 4490 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 LYSTQ99698 3801 aa0.54□□□□□ -2.32
LMNB1-207ENST00000494185 SRRM2Q9UQ35 2752 aaKnown RBP0.53□□□□□ -2.32
LMNB1-207ENST00000494185 PRRC2CQ9Y520 2896 aaKnown RBP0.53□□□□□ -2.32
LMNB1-207ENST00000494185 NBPF19A0A087WUL8 3843 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 MMP24-AS1A0A0U1RRL7 71 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 A8MTW9 85 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 SPRR1BP22528 89 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 WT1-ASQ06250 92 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 PIGYQ3MUY2 71 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 CLPSL2Q6UWE3 100 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 DEFB105AQ8NG35 78 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 DEFB104AQ8WTQ1 72 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 SACSQ9NZJ4 4579 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 MEGF8Q7Z7M0 2845 aa0.53□□□□□ -2.32
LMNB1-207ENST00000494185 KLK9Q2XQG4 91 aa0.52□□□□□ -2.33
LMNB1-207ENST00000494185 ATRQ13535 2644 aa0.52□□□□□ -2.33
LMNB1-207ENST00000494185 HECTD1Q9ULT8 2610 aa0.52□□□□□ -2.33
LMNB1-207ENST00000494185 AKAP13Q12802 2813 aa0.52□□□□□ -2.33
LMNB1-207ENST00000494185 DYNC2H1Q8NCM8 4307 aaKnown RBP0.52□□□□□ -2.33
LMNB1-207ENST00000494185 CACNA1HO95180 2353 aa0.52□□□□□ -2.33
LMNB1-207ENST00000494185 CHD9Q3L8U1 2897 aa0.51□□□□□ -2.33
LMNB1-207ENST00000494185 POLQO75417 2590 aa0.51□□□□□ -2.33
LMNB1-207ENST00000494185 PRCDQ00LT1 54 aa0.51□□□□□ -2.33
LMNB1-207ENST00000494185 Q5VSD8 79 aa0.51□□□□□ -2.33
LMNB1-207ENST00000494185 PKHD1L1Q86WI1 4243 aa0.51□□□□□ -2.33
LMNB1-207ENST00000494185 PRO0255Q9UI72 69 aa0.51□□□□□ -2.33
LMNB1-207ENST00000494185 ABCA2Q9BZC7 2435 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 CSPG4Q6UVK1 2322 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 VWFP04275 2813 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 DEFB131AP59861 70 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 KRTAP5-10Q6L8G5 202 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 S4R3F8 94 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 PKD1L2Q7Z442 2459 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 SPENQ96T58 3664 aaKnown RBP0.5□□□□□ -2.33
LMNB1-207ENST00000494185 MGAQ8IWI9 3026 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 DNAH2Q9P225 4427 aa0.5□□□□□ -2.33
LMNB1-207ENST00000494185 ANK3Q12955 4377 aaKnown RBP0.5□□□□□ -2.33
LMNB1-207ENST00000494185 NAV2Q8IVL1 2488 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 CREBBPQ92793 2442 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 DMBT1Q9UGM3 2413 aaPredicted RBP0.49□□□□□ -2.33
LMNB1-207ENST00000494185 VPS13BQ7Z7G8 4022 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 KMT2AQ03164 3969 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 NBASA2RRP1 2371 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 A0A0C4DFX4 3053 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 CELSR1Q9NYQ6 3014 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 APCP25054 2843 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 UBR5O95071 2799 aaPredicted RBP0.49□□□□□ -2.33
LMNB1-207ENST00000494185 ZNF469Q96JG9 3925 aaPredicted RBP0.49□□□□□ -2.33
LMNB1-207ENST00000494185 DNAH9Q9NYC9 4486 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 MUC16Q8WXI7 14507 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 SPTBN5Q9NRC6 3674 aaKnown RBP0.49□□□□□ -2.33
LMNB1-207ENST00000494185 EP300Q09472 2414 aaPredicted RBP0.49□□□□□ -2.33
LMNB1-207ENST00000494185 HSPG2P98160 4391 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 CHD6Q8TD26 2715 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 MUC5ACP98088 5654 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 ZFHX4Q86UP3 3567 aa0.49□□□□□ -2.33
LMNB1-207ENST00000494185 PIEZO1Q92508 2521 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 DNAH10Q8IVF4 4471 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 HUWE1Q7Z6Z7 4374 aaKnown RBP0.48□□□□□ -2.33
LMNB1-207ENST00000494185 BDP1A6H8Y1 2624 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 K7EIM0 57 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 PRLHP81277 87 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms