RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TENM2Q9NT68 2774 aa7.32□□□□□ -1.24
RFC4-214ENST00000494047 SPRR1BP22528 89 aa7.32□□□□□ -1.24
RFC4-214ENST00000494047 HCG22E2RYF7 251 aa7.31□□□□□ -1.24
RFC4-214ENST00000494047 Q5XG85 94 aa7.31□□□□□ -1.24
RFC4-214ENST00000494047 LINC00476Q8WZB0 136 aa7.31□□□□□ -1.24
RFC4-214ENST00000494047 OXTP01178 125 aa7.3□□□□□ -1.24
RFC4-214ENST00000494047 UBE2DNLQ8IWF7 75 aa7.3□□□□□ -1.24
RFC4-214ENST00000494047 RYR3Q15413 4870 aa7.3□□□□□ -1.24
RFC4-214ENST00000494047 FAM168BA1KXE4 195 aa7.29□□□□□ -1.24
RFC4-214ENST00000494047 RPL37AP61513 92 aaKnown RBP7.29□□□□□ -1.24
RFC4-214ENST00000494047 SMIM29Q86T20 159 aa7.29□□□□□ -1.24
RFC4-214ENST00000494047 LYSTQ99698 3801 aa7.28□□□□□ -1.24
RFC4-214ENST00000494047 MP68P56378 58 aa7.27□□□□□ -1.25
RFC4-214ENST00000494047 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.25
RFC4-214ENST00000494047 Q8N9L7 120 aa7.27□□□□□ -1.25
RFC4-214ENST00000494047 ST20-AS1Q8NBB2 130 aa7.27□□□□□ -1.25
RFC4-214ENST00000494047 SACSQ9NZJ4 4579 aa7.27□□□□□ -1.25
RFC4-214ENST00000494047 UBE2AP49459 152 aa7.26□□□□□ -1.25
RFC4-214ENST00000494047 DSCR10P59022 87 aa7.26□□□□□ -1.25
RFC4-214ENST00000494047 RYR2Q92736 4967 aa7.26□□□□□ -1.25
RFC4-214ENST00000494047 A0A096LNI7 61 aa7.25□□□□□ -1.25
RFC4-214ENST00000494047 IGFL1Q6UW32 110 aa7.25□□□□□ -1.25
RFC4-214ENST00000494047 DNAH1Q9P2D7 4330 aa7.24□□□□□ -1.25
RFC4-214ENST00000494047 PLECQ15149 4684 aaKnown RBP7.24□□□□□ -1.25
RFC4-214ENST00000494047 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
RFC4-214ENST00000494047 K7EQZ3 153 aa7.23□□□□□ -1.25
RFC4-214ENST00000494047 ALMS1Q8TCU4 4167 aa7.22□□□□□ -1.25
RFC4-214ENST00000494047 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
RFC4-214ENST00000494047 C9orf163Q8N9P6 203 aa7.22□□□□□ -1.25
RFC4-214ENST00000494047 ZCCHC13Q8WW36 166 aaKnown RBP7.22□□□□□ -1.25
RFC4-214ENST00000494047 CYP4F30PQ9H0H9 118 aa7.22□□□□□ -1.25
RFC4-214ENST00000494047 LY6G6CO95867 125 aa7.21□□□□□ -1.25
RFC4-214ENST00000494047 C4orf26Q17RF5 130 aa7.21□□□□□ -1.25
RFC4-214ENST00000494047 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.25
RFC4-214ENST00000494047 HIGD2AQ9BW72 106 aa7.21□□□□□ -1.25
RFC4-214ENST00000494047 PRO0628Q9UI54 55 aa7.21□□□□□ -1.25
RFC4-214ENST00000494047 ZNF706Q9Y5V0 76 aaPredicted RBP7.21□□□□□ -1.25
RFC4-214ENST00000494047 V9GYY9 64 aa7.21□□□□□ -1.25
RFC4-214ENST00000494047 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
RFC4-214ENST00000494047 FAM30AQ9NZY2 134 aa7.2□□□□□ -1.26
RFC4-214ENST00000494047 APLNQ9ULZ1 77 aa7.2□□□□□ -1.26
RFC4-214ENST00000494047 A0A087WSZ3 146 aa7.2□□□□□ -1.26
RFC4-214ENST00000494047 IGKV2-24A0A0C4DH68 120 aa7.2□□□□□ -1.26
RFC4-214ENST00000494047 A8MWP4 228 aa7.2□□□□□ -1.26
RFC4-214ENST00000494047 PRLHP81277 87 aa7.19□□□□□ -1.26
RFC4-214ENST00000494047 HYDINQ4G0P3 5121 aa7.19□□□□□ -1.26
RFC4-214ENST00000494047 A0A1W2PNN7 141 aa7.18□□□□□ -1.26
RFC4-214ENST00000494047 PRR15Q8IV56 129 aa7.18□□□□□ -1.26
RFC4-214ENST00000494047 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
RFC4-214ENST00000494047 NBDYA0A0U1RRE5 68 aa7.16□□□□□ -1.26
RFC4-214ENST00000494047 TP53AIP1Q9HCN2 124 aa7.16□□□□□ -1.26
RFC4-214ENST00000494047 MOBPQ13875 183 aa7.15□□□□□ -1.26
RFC4-214ENST00000494047 CASC2Q6XLA1 102 aa7.15□□□□□ -1.26
RFC4-214ENST00000494047 KRTAP29-1A8MX34 341 aaPredicted RBP7.14□□□□□ -1.27
RFC4-214ENST00000494047 KRTAP1-5Q9BYS1 174 aa7.14□□□□□ -1.27
RFC4-214ENST00000494047 KMT2AQ03164 3969 aa7.14□□□□□ -1.27
RFC4-214ENST00000494047 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
RFC4-214ENST00000494047 Q1T7F1 81 aa7.13□□□□□ -1.27
RFC4-214ENST00000494047 LINC00472Q9H8W2 130 aa7.13□□□□□ -1.27
RFC4-214ENST00000494047 LRCOL1A6NCL2 159 aa7.12□□□□□ -1.27
RFC4-214ENST00000494047 BIRC6Q9NR09 4857 aa7.12□□□□□ -1.27
RFC4-214ENST00000494047 PHF5AQ7RTV0 110 aaKnown RBP7.11□□□□□ -1.27
RFC4-214ENST00000494047 KRTAP13-1Q8IUC0 172 aa7.11□□□□□ -1.27
RFC4-214ENST00000494047 LINC00483Q53H64 154 aa7.1□□□□□ -1.27
RFC4-214ENST00000494047 C1orf195Q5TG92 126 aa7.1□□□□□ -1.27
RFC4-214ENST00000494047 DNAH6Q9C0G6 4158 aa7.1□□□□□ -1.27
RFC4-214ENST00000494047 VPS13DQ5THJ4 4388 aa7.1□□□□□ -1.27
RFC4-214ENST00000494047 WFDC13Q8IUB5 93 aa7.09□□□□□ -1.27
RFC4-214ENST00000494047 H0Y9P7 68 aa7.08□□□□□ -1.28
RFC4-214ENST00000494047 SPACA4Q8TDM5 124 aa7.08□□□□□ -1.28
RFC4-214ENST00000494047 C1orf64Q8NEQ6 169 aa7.08□□□□□ -1.28
RFC4-214ENST00000494047 Q6ZRN7 208 aaPredicted RBP7.07□□□□□ -1.28
RFC4-214ENST00000494047 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
RFC4-214ENST00000494047 CDK2AP2O75956 126 aa7.06□□□□□ -1.28
RFC4-214ENST00000494047 LINC00208Q96KT6 92 aa7.06□□□□□ -1.28
RFC4-214ENST00000494047 EPPK1P58107 5090 aaKnown RBP7.05□□□□□ -1.28
RFC4-214ENST00000494047 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
RFC4-214ENST00000494047 LIMD2Q9BT23 127 aa7.04□□□□□ -1.28
RFC4-214ENST00000494047 MMP24-AS1A0A0U1RRL7 71 aa7.03□□□□□ -1.28
RFC4-214ENST00000494047 ASB16-AS1Q495Z4 193 aa7.03□□□□□ -1.28
RFC4-214ENST00000494047 MPLKIPQ8TAP9 179 aa7.03□□□□□ -1.28
RFC4-214ENST00000494047 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
RFC4-214ENST00000494047 DNAH10Q8IVF4 4471 aa7.01□□□□□ -1.29
RFC4-214ENST00000494047 CD164Q04900 197 aa7.01□□□□□ -1.29
RFC4-214ENST00000494047 FAM229BQ4G0N7 80 aa7.01□□□□□ -1.29
RFC4-214ENST00000494047 Q6ZR54 194 aa7.01□□□□□ -1.29
RFC4-214ENST00000494047 BRK1Q8WUW1 75 aa7.01□□□□□ -1.29
RFC4-214ENST00000494047 A0A087WTM6 91 aa7□□□□□ -1.29
RFC4-214ENST00000494047 IGLV5-52A0A0A0MRZ9 124 aa7□□□□□ -1.29
RFC4-214ENST00000494047 PLAC8Q9NZF1 115 aa7□□□□□ -1.29
RFC4-214ENST00000494047 FRAS1Q86XX4 4008 aa7□□□□□ -1.29
RFC4-214ENST00000494047 DEFB116Q30KQ4 102 aa6.99□□□□□ -1.29
RFC4-214ENST00000494047 IGLV7-46A0A075B6I9 117 aa6.98□□□□□ -1.29
RFC4-214ENST00000494047 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
RFC4-214ENST00000494047 ZNF861PO60384 105 aa6.98□□□□□ -1.29
RFC4-214ENST00000494047 C1orf134Q5TEV5 83 aa6.98□□□□□ -1.29
RFC4-214ENST00000494047 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
RFC4-214ENST00000494047 C8orf17Q9NRJ1 99 aa6.97□□□□□ -1.29
RFC4-214ENST00000494047 RTL8CO15255 209 aa6.96□□□□□ -1.29
RFC4-214ENST00000494047 Q96NJ1 140 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms