RNA–Protein interactions for RNA: ENST00000490647.1

LINC02049-201, Transcript of long intergenic non-protein coding RNA 2049, humanhuman

TSL 1 (best) BASIC

Gene LINC02049, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02049-201ENST00000490647 SMIM27A0A1W2PRY6 76 aa0.97□□□□□ -2.25
LINC02049-201ENST00000490647 KRTAP19-3Q7Z4W3 81 aa0.97□□□□□ -2.25
LINC02049-201ENST00000490647 CSMD3Q7Z407 3707 aa0.97□□□□□ -2.25
LINC02049-201ENST00000490647 IQGAP1P46940 1657 aa0.97□□□□□ -2.25
LINC02049-201ENST00000490647 PKDREJQ9NTG1 2253 aa0.96□□□□□ -2.26
LINC02049-201ENST00000490647 AKAP6Q13023 2319 aa0.96□□□□□ -2.26
LINC02049-201ENST00000490647 FAM208AQ9UK61 1670 aaKnown RBP0.96□□□□□ -2.26
LINC02049-201ENST00000490647 AHNAK2Q8IVF2 5795 aa0.95□□□□□ -2.26
LINC02049-201ENST00000490647 FRAS1Q86XX4 4008 aa0.95□□□□□ -2.26
LINC02049-201ENST00000490647 WNK2Q9Y3S1 2297 aa0.95□□□□□ -2.26
LINC02049-201ENST00000490647 DDX60Q8IY21 1712 aaKnown RBP0.95□□□□□ -2.26
LINC02049-201ENST00000490647 LMO7Q8WWI1 1683 aa0.94□□□□□ -2.26
LINC02049-201ENST00000490647 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
LINC02049-201ENST00000490647 RPS27P42677 84 aaKnown RBP0.94□□□□□ -2.26
LINC02049-201ENST00000490647 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
LINC02049-201ENST00000490647 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
LINC02049-201ENST00000490647 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
LINC02049-201ENST00000490647 TPRP12270 2363 aaKnown RBP0.94□□□□□ -2.26
LINC02049-201ENST00000490647 APCP25054 2843 aa0.93□□□□□ -2.26
LINC02049-201ENST00000490647 TRANK1O15050 2925 aa0.93□□□□□ -2.26
LINC02049-201ENST00000490647 SPINK1P00995 79 aa0.92□□□□□ -2.26
LINC02049-201ENST00000490647 SMR3AQ99954 134 aa0.92□□□□□ -2.26
LINC02049-201ENST00000490647 LINC01546A6NGU7 62 aa0.91□□□□□ -2.26
LINC02049-201ENST00000490647 FBN2P35556 2912 aa0.91□□□□□ -2.26
LINC02049-201ENST00000490647 CHD6Q8TD26 2715 aa0.9□□□□□ -2.26
LINC02049-201ENST00000490647 TFF3Q07654 80 aa0.9□□□□□ -2.27
LINC02049-201ENST00000490647 PDE4DIPQ5VU43 2346 aa0.9□□□□□ -2.27
LINC02049-201ENST00000490647 ABCA2Q9BZC7 2435 aa0.9□□□□□ -2.27
LINC02049-201ENST00000490647 ATRQ13535 2644 aa0.9□□□□□ -2.27
LINC02049-201ENST00000490647 DSPP15924 2871 aaKnown RBP0.89□□□□□ -2.27
LINC02049-201ENST00000490647 WT1-ASQ06250 92 aa0.89□□□□□ -2.27
LINC02049-201ENST00000490647 VWFP04275 2813 aa0.89□□□□□ -2.27
LINC02049-201ENST00000490647 TENM4Q6N022 2769 aa0.88□□□□□ -2.27
LINC02049-201ENST00000490647 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
LINC02049-201ENST00000490647 DEFB106AQ8N104 65 aa0.87□□□□□ -2.27
LINC02049-201ENST00000490647 ZNF469Q96JG9 3925 aaPredicted RBP0.87□□□□□ -2.27
LINC02049-201ENST00000490647 SPTA1P02549 2419 aa0.86□□□□□ -2.27
LINC02049-201ENST00000490647 NFAT5O94916 1531 aa0.85□□□□□ -2.27
LINC02049-201ENST00000490647 S4R3F8 94 aa0.85□□□□□ -2.27
LINC02049-201ENST00000490647 U3KQA8 63 aa0.85□□□□□ -2.27
LINC02049-201ENST00000490647 NCOR1O75376 2440 aa0.85□□□□□ -2.27
LINC02049-201ENST00000490647 CSPG4Q6UVK1 2322 aa0.84□□□□□ -2.27
LINC02049-201ENST00000490647 DEFB135Q30KP9 77 aa0.84□□□□□ -2.27
LINC02049-201ENST00000490647 TENM3Q9P273 2699 aa0.84□□□□□ -2.28
LINC02049-201ENST00000490647 OTOGQ6ZRI0 2925 aa0.84□□□□□ -2.28
LINC02049-201ENST00000490647 IGF2RP11717 2491 aa0.83□□□□□ -2.28
LINC02049-201ENST00000490647 PRLHP81277 87 aa0.83□□□□□ -2.28
LINC02049-201ENST00000490647 KIF21BO75037 1637 aa0.82□□□□□ -2.28
LINC02049-201ENST00000490647 AKAP13Q12802 2813 aa0.82□□□□□ -2.28
LINC02049-201ENST00000490647 M0R2T5 61 aa0.82□□□□□ -2.28
LINC02049-201ENST00000490647 WFDC10BQ8IUB3 73 aa0.82□□□□□ -2.28
LINC02049-201ENST00000490647 KAAG1Q9UBP8 84 aa0.82□□□□□ -2.28
LINC02049-201ENST00000490647 ZFYVE26Q68DK2 2539 aa0.82□□□□□ -2.28
LINC02049-201ENST00000490647 H3BUA1 57 aa0.81□□□□□ -2.28
LINC02049-201ENST00000490647 SMIM2Q9BVW6 85 aa0.81□□□□□ -2.28
LINC02049-201ENST00000490647 PCNX1Q96RV3 2341 aa0.8□□□□□ -2.28
LINC02049-201ENST00000490647 H0YGG7 62 aa0.8□□□□□ -2.28
LINC02049-201ENST00000490647 BSNQ9UPA5 3926 aa0.79□□□□□ -2.28
LINC02049-201ENST00000490647 UNC79Q9P2D8 2635 aa0.79□□□□□ -2.28
LINC02049-201ENST00000490647 ATP7AQ04656 1500 aa0.79□□□□□ -2.28
LINC02049-201ENST00000490647 PRM1P04553 51 aa0.78□□□□□ -2.28
LINC02049-201ENST00000490647 TNXBP22105 4242 aa0.78□□□□□ -2.29
LINC02049-201ENST00000490647 FAT2Q9NYQ8 4349 aa0.77□□□□□ -2.29
LINC02049-201ENST00000490647 TRPM2O94759 1503 aa0.77□□□□□ -2.29
LINC02049-201ENST00000490647 HECTD1Q9ULT8 2610 aa0.76□□□□□ -2.29
LINC02049-201ENST00000490647 PRRC2CQ9Y520 2896 aaKnown RBP0.76□□□□□ -2.29
LINC02049-201ENST00000490647 CHD8Q9HCK8 2581 aa0.76□□□□□ -2.29
LINC02049-201ENST00000490647 PRKDCP78527 4128 aaKnown RBP0.76□□□□□ -2.29
LINC02049-201ENST00000490647 CELSR1Q9NYQ6 3014 aa0.74□□□□□ -2.29
LINC02049-201ENST00000490647 PKD1L1Q8TDX9 2849 aa0.74□□□□□ -2.29
LINC02049-201ENST00000490647 NDUFA1O15239 70 aa0.73□□□□□ -2.29
LINC02049-201ENST00000490647 TNRC18O15417 2968 aaPredicted RBP0.73□□□□□ -2.29
LINC02049-201ENST00000490647 PTPN13Q12923 2485 aa0.73□□□□□ -2.29
LINC02049-201ENST00000490647 CLTCL1P53675 1640 aa0.72□□□□□ -2.29
LINC02049-201ENST00000490647 CEP290O15078 2479 aa0.72□□□□□ -2.29
LINC02049-201ENST00000490647 SAMD9LQ8IVG5 1584 aa0.72□□□□□ -2.29
LINC02049-201ENST00000490647 EP300Q09472 2414 aaPredicted RBP0.72□□□□□ -2.29
LINC02049-201ENST00000490647 HUWE1Q7Z6Z7 4374 aaKnown RBP0.7□□□□□ -2.3
LINC02049-201ENST00000490647 CREBBPQ92793 2442 aa0.69□□□□□ -2.3
LINC02049-201ENST00000490647 NOP10Q9NPE3 64 aaKnown RBP0.69□□□□□ -2.3
LINC02049-201ENST00000490647 IGLV5-48A0A075B6I7 105 aa0.68□□□□□ -2.3
LINC02049-201ENST00000490647 PKD1L2Q7Z442 2459 aa0.68□□□□□ -2.3
LINC02049-201ENST00000490647 MMP24-AS1A0A0U1RRL7 71 aa0.67□□□□□ -2.3
LINC02049-201ENST00000490647 NAV2Q8IVL1 2488 aa0.66□□□□□ -2.3
LINC02049-201ENST00000490647 SETXQ7Z333 2677 aaKnown RBP0.66□□□□□ -2.3
LINC02049-201ENST00000490647 UBR5O95071 2799 aaPredicted RBP0.66□□□□□ -2.3
LINC02049-201ENST00000490647 NBASA2RRP1 2371 aa0.66□□□□□ -2.3
LINC02049-201ENST00000490647 MAP1BP46821 2468 aaKnown RBP0.66□□□□□ -2.3
LINC02049-201ENST00000490647 LYSTQ99698 3801 aa0.66□□□□□ -2.3
LINC02049-201ENST00000490647 DEFB131AP59861 70 aa0.65□□□□□ -2.31
LINC02049-201ENST00000490647 USP24Q9UPU5 2620 aa0.64□□□□□ -2.31
LINC02049-201ENST00000490647 KRTAP21-1Q3LI58 79 aa0.64□□□□□ -2.31
LINC02049-201ENST00000490647 LRP1Q07954 4544 aaKnown RBP0.64□□□□□ -2.31
LINC02049-201ENST00000490647 SYNE1Q8NF91 8797 aaKnown RBP0.64□□□□□ -2.31
LINC02049-201ENST00000490647 HIVEP3Q5T1R4 2406 aa0.63□□□□□ -2.31
LINC02049-201ENST00000490647 WNK1Q9H4A3 2382 aa0.62□□□□□ -2.31
LINC02049-201ENST00000490647 NCOR2Q9Y618 2525 aa0.62□□□□□ -2.31
LINC02049-201ENST00000490647 ACANP16112 2415 aa0.62□□□□□ -2.31
LINC02049-201ENST00000490647 H3BNG1 76 aa0.62□□□□□ -2.31
LINC02049-201ENST00000490647 KMT2AQ03164 3969 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms