RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 FAM30AQ9NZY2 134 aa6.95□□□□□ -1.3
DDX56-212ENST00000485367 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
DDX56-212ENST00000485367 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
DDX56-212ENST00000485367 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
DDX56-212ENST00000485367 CLPSL2Q6UWE3 100 aa6.93□□□□□ -1.3
DDX56-212ENST00000485367 SRRM2Q9UQ35 2752 aaKnown RBP6.93□□□□□ -1.3
DDX56-212ENST00000485367 GVQW2A0A096LPI5 108 aaPredicted RBP6.92□□□□□ -1.3
DDX56-212ENST00000485367 FAM229AH3BQW9 127 aa6.92□□□□□ -1.3
DDX56-212ENST00000485367 Q6ZQY7 126 aa6.92□□□□□ -1.3
DDX56-212ENST00000485367 LINC00269Q8N2A0 174 aa6.92□□□□□ -1.3
DDX56-212ENST00000485367 DIRC1Q969H9 104 aa6.92□□□□□ -1.3
DDX56-212ENST00000485367 REG3AQ06141 175 aa6.91□□□□□ -1.3
DDX56-212ENST00000485367 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
DDX56-212ENST00000485367 Q6ZSA8 131 aa6.9□□□□□ -1.3
DDX56-212ENST00000485367 Q8NDZ9 215 aa6.9□□□□□ -1.3
DDX56-212ENST00000485367 PRR34Q9NV39 138 aa6.9□□□□□ -1.3
DDX56-212ENST00000485367 SNURFQ9Y675 71 aa6.9□□□□□ -1.3
DDX56-212ENST00000485367 SPAG11BQ08648 103 aa6.9□□□□□ -1.31
DDX56-212ENST00000485367 NREPQ16612 68 aa6.9□□□□□ -1.31
DDX56-212ENST00000485367 FLG2Q5D862 2391 aaPredicted RBP6.89□□□□□ -1.31
DDX56-212ENST00000485367 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
DDX56-212ENST00000485367 COX7BP24311 80 aa6.89□□□□□ -1.31
DDX56-212ENST00000485367 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
DDX56-212ENST00000485367 TMEM254Q8TBM7 123 aa6.88□□□□□ -1.31
DDX56-212ENST00000485367 BPY2O14599 106 aa6.87□□□□□ -1.31
DDX56-212ENST00000485367 ELOF1P60002 83 aaKnown RBP6.87□□□□□ -1.31
DDX56-212ENST00000485367 Q1T7F1 81 aa6.87□□□□□ -1.31
DDX56-212ENST00000485367 KRTAP26-1Q6PEX3 210 aa6.87□□□□□ -1.31
DDX56-212ENST00000485367 SCXQ7RTU7 201 aa6.87□□□□□ -1.31
DDX56-212ENST00000485367 LINC00528Q8N1L1 170 aa6.87□□□□□ -1.31
DDX56-212ENST00000485367 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
DDX56-212ENST00000485367 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
DDX56-212ENST00000485367 FAM229BQ4G0N7 80 aa6.86□□□□□ -1.31
DDX56-212ENST00000485367 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
DDX56-212ENST00000485367 A0A1B0GW54 56 aa6.85□□□□□ -1.31
DDX56-212ENST00000485367 PLA2G1BP04054 148 aaKnown RBP6.85□□□□□ -1.31
DDX56-212ENST00000485367 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
DDX56-212ENST00000485367 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
DDX56-212ENST00000485367 CIRBP-AS1Q8TBR5 109 aa6.84□□□□□ -1.31
DDX56-212ENST00000485367 PRYO14603 147 aa6.83□□□□□ -1.32
DDX56-212ENST00000485367 OCR1Q9BZK8 76 aa6.83□□□□□ -1.32
DDX56-212ENST00000485367 MYCBP2O75592 4640 aa6.83□□□□□ -1.32
DDX56-212ENST00000485367 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
DDX56-212ENST00000485367 IGKV4-1P06312 121 aa6.82□□□□□ -1.32
DDX56-212ENST00000485367 M0R378 163 aa6.81□□□□□ -1.32
DDX56-212ENST00000485367 HERC1Q15751 4861 aa6.81□□□□□ -1.32
DDX56-212ENST00000485367 hDV103S1A0JD37 113 aa6.8□□□□□ -1.32
DDX56-212ENST00000485367 C6orf48Q9UBA6 75 aa6.8□□□□□ -1.32
DDX56-212ENST00000485367 VPREB1P12018 145 aa6.8□□□□□ -1.32
DDX56-212ENST00000485367 CNBPP62633 177 aaKnown RBP6.8□□□□□ -1.32
DDX56-212ENST00000485367 MRPL55Q7Z7F7 128 aaKnown RBP6.8□□□□□ -1.32
DDX56-212ENST00000485367 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.8□□□□□ -1.32
DDX56-212ENST00000485367 HIGD2BQ4VC39 106 aa6.79□□□□□ -1.32
DDX56-212ENST00000485367 PANO1I0J062 215 aa6.78□□□□□ -1.32
DDX56-212ENST00000485367 J3QL48 77 aa6.78□□□□□ -1.32
DDX56-212ENST00000485367 C15orf56Q8N910 161 aa6.78□□□□□ -1.32
DDX56-212ENST00000485367 KRTAP10-4P60372 401 aaPredicted RBP6.77□□□□□ -1.33
DDX56-212ENST00000485367 RPL37AP61513 92 aaKnown RBP6.76□□□□□ -1.33
DDX56-212ENST00000485367 XAGE1AQ9HD64 81 aa6.76□□□□□ -1.33
DDX56-212ENST00000485367 IGLV5-48A0A075B6I7 105 aa6.75□□□□□ -1.33
DDX56-212ENST00000485367 CHTF8P0CG12 524 aa6.75□□□□□ -1.33
DDX56-212ENST00000485367 Q6ZRP5 223 aa6.75□□□□□ -1.33
DDX56-212ENST00000485367 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
DDX56-212ENST00000485367 CAMK2N2Q96S95 79 aa6.74□□□□□ -1.33
DDX56-212ENST00000485367 PKHD1L1Q86WI1 4243 aa6.73□□□□□ -1.33
DDX56-212ENST00000485367 KRTAP29-1A8MX34 341 aaPredicted RBP6.73□□□□□ -1.33
DDX56-212ENST00000485367 UBE2BP63146 152 aa6.72□□□□□ -1.33
DDX56-212ENST00000485367 Q8N9L7 120 aa6.72□□□□□ -1.33
DDX56-212ENST00000485367 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
DDX56-212ENST00000485367 CYP4F30PQ9H0H9 118 aa6.72□□□□□ -1.33
DDX56-212ENST00000485367 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
DDX56-212ENST00000485367 IGKV2-24A0A0C4DH68 120 aa6.71□□□□□ -1.34
DDX56-212ENST00000485367 NDUFS5O43920 106 aa6.71□□□□□ -1.34
DDX56-212ENST00000485367 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
DDX56-212ENST00000485367 RBM12B-AS1Q9P1G2 102 aa6.7□□□□□ -1.34
DDX56-212ENST00000485367 DHRS4-AS1Q9P1J3 65 aa6.7□□□□□ -1.34
DDX56-212ENST00000485367 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
DDX56-212ENST00000485367 PLAC8Q9NZF1 115 aa6.69□□□□□ -1.34
DDX56-212ENST00000485367 FAT3Q8TDW7 4589 aa6.69□□□□□ -1.34
DDX56-212ENST00000485367 TRAV22A0A0B4J277 110 aa6.69□□□□□ -1.34
DDX56-212ENST00000485367 ZCCHC13Q8WW36 166 aaKnown RBP6.69□□□□□ -1.34
DDX56-212ENST00000485367 SYCNQ0VAF6 134 aa6.68□□□□□ -1.34
DDX56-212ENST00000485367 SMIM29Q86T20 159 aa6.68□□□□□ -1.34
DDX56-212ENST00000485367 Q8N377 158 aa6.68□□□□□ -1.34
DDX56-212ENST00000485367 A0A096LNI7 61 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 ETDCA0A1B0GVM5 59 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 C1orf64Q8NEQ6 169 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 C7orf33Q8WU49 177 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 NDUFB1O75438 58 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 C4orf48Q5BLP8 95 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 PHF5AQ7RTV0 110 aaKnown RBP6.67□□□□□ -1.34
DDX56-212ENST00000485367 SPRR4Q96PI1 79 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
DDX56-212ENST00000485367 NKAPP1Q8N9T2 125 aa6.66□□□□□ -1.34
DDX56-212ENST00000485367 Q8NBF4 154 aa6.66□□□□□ -1.34
DDX56-212ENST00000485367 UBE2AP49459 152 aa6.65□□□□□ -1.34
DDX56-212ENST00000485367 A0A1W2PNM2 257 aa6.64□□□□□ -1.35
DDX56-212ENST00000485367 C1orf137Q5JT78 98 aa6.64□□□□□ -1.35
DDX56-212ENST00000485367 ATP11AUNQ6ZP68 121 aa6.64□□□□□ -1.35
DDX56-212ENST00000485367 Q6ZRX8 168 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms