RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 Q6ZQY7 126 aa4.97□□□□□ -1.61
SNX13-208ENST00000482558 CAMK2N1Q7Z7J9 78 aa4.97□□□□□ -1.61
SNX13-208ENST00000482558 ATOX1O00244 68 aa4.96□□□□□ -1.62
SNX13-208ENST00000482558 SMCR5Q8TEV8 140 aa4.96□□□□□ -1.62
SNX13-208ENST00000482558 B9D2Q9BPU9 175 aa4.96□□□□□ -1.62
SNX13-208ENST00000482558 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
SNX13-208ENST00000482558 ZNF706Q9Y5V0 76 aaPredicted RBP4.96□□□□□ -1.62
SNX13-208ENST00000482558 RPS28P62857 69 aaKnown RBP4.95□□□□□ -1.62
SNX13-208ENST00000482558 C9orf129Q5T035 196 aaKnown RBP4.95□□□□□ -1.62
SNX13-208ENST00000482558 Q6ZQT0 140 aa4.95□□□□□ -1.62
SNX13-208ENST00000482558 COL6A5A8TX70 2615 aa4.94□□□□□ -1.62
SNX13-208ENST00000482558 FAM236AA0A1B0GUQ0 79 aa4.94□□□□□ -1.62
SNX13-208ENST00000482558 FAM236BA0A1B0GV22 79 aa4.94□□□□□ -1.62
SNX13-208ENST00000482558 CNBPP62633 177 aaKnown RBP4.94□□□□□ -1.62
SNX13-208ENST00000482558 FBN1P35555 2871 aaKnown RBP4.94□□□□□ -1.62
SNX13-208ENST00000482558 ANK2Q01484 3957 aa4.93□□□□□ -1.62
SNX13-208ENST00000482558 TRBV7-4A0A0J9YYF1 115 aa4.93□□□□□ -1.62
SNX13-208ENST00000482558 NUPR2A6NF83 97 aa4.93□□□□□ -1.62
SNX13-208ENST00000482558 BCE1O60756 84 aa4.93□□□□□ -1.62
SNX13-208ENST00000482558 HIST1H4AP62805 103 aaKnown RBP4.93□□□□□ -1.62
SNX13-208ENST00000482558 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
SNX13-208ENST00000482558 UBE2DNLQ8IWF7 75 aa4.93□□□□□ -1.62
SNX13-208ENST00000482558 PKD1L1Q8TDX9 2849 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 IGLV1-50A0A075B6I6 118 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 ETDCA0A1B0GVM5 59 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 J3KT08 172 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 UQCRQO14949 82 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 PRB2P02812 416 aaPredicted RBP4.92□□□□□ -1.62
SNX13-208ENST00000482558 SPRR1AP35321 89 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 Q8N377 158 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 APLNQ9ULZ1 77 aa4.92□□□□□ -1.62
SNX13-208ENST00000482558 PSCAO43653 123 aa4.91□□□□□ -1.62
SNX13-208ENST00000482558 Q6ZRX8 168 aa4.91□□□□□ -1.62
SNX13-208ENST00000482558 NOTCH1P46531 2555 aa4.91□□□□□ -1.62
SNX13-208ENST00000482558 TENM3Q9P273 2699 aa4.9□□□□□ -1.62
SNX13-208ENST00000482558 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.63
SNX13-208ENST00000482558 C16orf90A8MZG2 172 aa4.9□□□□□ -1.63
SNX13-208ENST00000482558 LINC00474Q9P2X8 69 aa4.9□□□□□ -1.63
SNX13-208ENST00000482558 LINC00313P59037 77 aa4.89□□□□□ -1.63
SNX13-208ENST00000482558 C3orf22Q8N5N4 141 aa4.89□□□□□ -1.63
SNX13-208ENST00000482558 NBEAL1Q6ZS30 2694 aa4.89□□□□□ -1.63
SNX13-208ENST00000482558 IGLV5-48A0A075B6I7 105 aa4.88□□□□□ -1.63
SNX13-208ENST00000482558 IGKV3D-7A0A0C4DH55 119 aa4.88□□□□□ -1.63
SNX13-208ENST00000482558 COX7CP15954 63 aa4.88□□□□□ -1.63
SNX13-208ENST00000482558 UBE2AP49459 152 aa4.88□□□□□ -1.63
SNX13-208ENST00000482558 HUWE1Q7Z6Z7 4374 aaKnown RBP4.88□□□□□ -1.63
SNX13-208ENST00000482558 MT3P25713 68 aa4.87□□□□□ -1.63
SNX13-208ENST00000482558 FUSP35637 526 aaKnown RBP eCLIP4.87□□□□□ -1.63
SNX13-208ENST00000482558 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
SNX13-208ENST00000482558 MGAM2Q2M2H8 2515 aa4.87□□□□□ -1.63
SNX13-208ENST00000482558 CCDC179H3BU77 68 aa4.86□□□□□ -1.63
SNX13-208ENST00000482558 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
SNX13-208ENST00000482558 CRYGAP11844 174 aa4.85□□□□□ -1.63
SNX13-208ENST00000482558 HAMPP81172 84 aa4.85□□□□□ -1.63
SNX13-208ENST00000482558 C9orf153Q5TBE3 101 aa4.85□□□□□ -1.63
SNX13-208ENST00000482558 F8WEM9 126 aa4.84□□□□□ -1.63
SNX13-208ENST00000482558 UBE2BP63146 152 aa4.84□□□□□ -1.63
SNX13-208ENST00000482558 NREPQ16612 68 aa4.84□□□□□ -1.63
SNX13-208ENST00000482558 C9orf163Q8N9P6 203 aa4.84□□□□□ -1.63
SNX13-208ENST00000482558 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
SNX13-208ENST00000482558 FAM168BA1KXE4 195 aa4.83□□□□□ -1.64
SNX13-208ENST00000482558 A8MUN3 132 aa4.83□□□□□ -1.64
SNX13-208ENST00000482558 Q9BRP9 147 aa4.83□□□□□ -1.64
SNX13-208ENST00000482558 DYNC2H1Q8NCM8 4307 aaKnown RBP4.83□□□□□ -1.64
SNX13-208ENST00000482558 A0A096LNI7 61 aa4.82□□□□□ -1.64
SNX13-208ENST00000482558 DEFB105AQ8NG35 78 aa4.82□□□□□ -1.64
SNX13-208ENST00000482558 C8orf17Q9NRJ1 99 aa4.82□□□□□ -1.64
SNX13-208ENST00000482558 TRAV7A0A075B6U4 112 aa4.81□□□□□ -1.64
SNX13-208ENST00000482558 C1orf137Q5JT78 98 aa4.81□□□□□ -1.64
SNX13-208ENST00000482558 KRTAP7-1Q8IUC3 87 aa4.81□□□□□ -1.64
SNX13-208ENST00000482558 SPRR4Q96PI1 79 aa4.81□□□□□ -1.64
SNX13-208ENST00000482558 DNAH9Q9NYC9 4486 aa4.81□□□□□ -1.64
SNX13-208ENST00000482558 A0A087WVE0 104 aa4.8□□□□□ -1.64
SNX13-208ENST00000482558 LRCOL1A6NCL2 159 aa4.8□□□□□ -1.64
SNX13-208ENST00000482558 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
SNX13-208ENST00000482558 STAB2Q8WWQ8 2551 aa4.8□□□□□ -1.64
SNX13-208ENST00000482558 IGKV2-24A0A0C4DH68 120 aa4.79□□□□□ -1.64
SNX13-208ENST00000482558 BPY2O14599 106 aa4.79□□□□□ -1.64
SNX13-208ENST00000482558 SPRR1BP22528 89 aa4.79□□□□□ -1.64
SNX13-208ENST00000482558 A0A1W2PNN7 141 aa4.78□□□□□ -1.64
SNX13-208ENST00000482558 M0R2N4 97 aa4.78□□□□□ -1.64
SNX13-208ENST00000482558 ERC2-IT1O76042 136 aa4.78□□□□□ -1.64
SNX13-208ENST00000482558 TMEM258P61165 79 aa4.78□□□□□ -1.64
SNX13-208ENST00000482558 Q6ZRN7 208 aaPredicted RBP4.78□□□□□ -1.64
SNX13-208ENST00000482558 SCXQ7RTU7 201 aa4.78□□□□□ -1.64
SNX13-208ENST00000482558 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.77□□□□□ -1.65
SNX13-208ENST00000482558 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
SNX13-208ENST00000482558 A0A1B0GVX0 72 aa4.76□□□□□ -1.65
SNX13-208ENST00000482558 NDUFC1O43677 76 aa4.76□□□□□ -1.65
SNX13-208ENST00000482558 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
SNX13-208ENST00000482558 RPL37AP61513 92 aaKnown RBP4.76□□□□□ -1.65
SNX13-208ENST00000482558 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
SNX13-208ENST00000482558 ST20-AS1Q8NBB2 130 aa4.76□□□□□ -1.65
SNX13-208ENST00000482558 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
SNX13-208ENST00000482558 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
SNX13-208ENST00000482558 A0A087WTM6 91 aa4.74□□□□□ -1.65
SNX13-208ENST00000482558 C3orf84H3BNL1 204 aa4.74□□□□□ -1.65
SNX13-208ENST00000482558 KTN1-AS1Q86SY8 53 aa4.74□□□□□ -1.65
SNX13-208ENST00000482558 SPACA4Q8TDM5 124 aa4.74□□□□□ -1.65
SNX13-208ENST00000482558 DPH3Q96FX2 82 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms