RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 LINC00308Q8TCZ7 52 aa6.57□□□□□ -1.36
VARS2-208ENST00000477052 ANAPC13Q9BS18 74 aa6.57□□□□□ -1.36
VARS2-208ENST00000477052 SPANXCQ9NY87 97 aa6.57□□□□□ -1.36
VARS2-208ENST00000477052 PRO0461Q9UI25 63 aa6.57□□□□□ -1.36
VARS2-208ENST00000477052 TRBV10-2A0A0K0K1G8 114 aa6.56□□□□□ -1.36
VARS2-208ENST00000477052 B5MCH6 92 aa6.56□□□□□ -1.36
VARS2-208ENST00000477052 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
VARS2-208ENST00000477052 NPC2P61916 151 aa6.56□□□□□ -1.36
VARS2-208ENST00000477052 SNCGO76070 127 aa6.55□□□□□ -1.36
VARS2-208ENST00000477052 FP248Q71RG6 208 aaPredicted RBP6.55□□□□□ -1.36
VARS2-208ENST00000477052 Q9BRP9 147 aa6.55□□□□□ -1.36
VARS2-208ENST00000477052 IFITM1P13164 125 aa6.54□□□□□ -1.36
VARS2-208ENST00000477052 LINC00483Q53H64 154 aa6.54□□□□□ -1.36
VARS2-208ENST00000477052 COPS9Q8WXC6 57 aa6.54□□□□□ -1.36
VARS2-208ENST00000477052 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
VARS2-208ENST00000477052 SPINK1P00995 79 aa6.53□□□□□ -1.36
VARS2-208ENST00000477052 COX6CP09669 75 aa6.53□□□□□ -1.36
VARS2-208ENST00000477052 Q6Q795 121 aa6.53□□□□□ -1.36
VARS2-208ENST00000477052 KRTAP9-6A0A140TA67 174 aa6.52□□□□□ -1.37
VARS2-208ENST00000477052 ATXN8Q156A1 80 aa6.52□□□□□ -1.37
VARS2-208ENST00000477052 ASB16-AS1Q495Z4 193 aa6.52□□□□□ -1.37
VARS2-208ENST00000477052 IGLV6-57P01721 117 aa6.51□□□□□ -1.37
VARS2-208ENST00000477052 Q8N377 158 aa6.51□□□□□ -1.37
VARS2-208ENST00000477052 A0A0B4J2C4 111 aa6.5□□□□□ -1.37
VARS2-208ENST00000477052 S100A7L2Q5SY68 101 aa6.5□□□□□ -1.37
VARS2-208ENST00000477052 MUSTN1Q8IVN3 82 aa6.5□□□□□ -1.37
VARS2-208ENST00000477052 ST20-AS1Q8NBB2 130 aa6.5□□□□□ -1.37
VARS2-208ENST00000477052 SLC25A20O43772 301 aa6.49□□□□□ -1.37
VARS2-208ENST00000477052 Q6ZRX8 168 aa6.49□□□□□ -1.37
VARS2-208ENST00000477052 CFC1BP0CG36 223 aa6.48□□□□□ -1.37
VARS2-208ENST00000477052 CFC1P0CG37 223 aa6.48□□□□□ -1.37
VARS2-208ENST00000477052 Q1RN00 199 aa6.48□□□□□ -1.37
VARS2-208ENST00000477052 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
VARS2-208ENST00000477052 ANKRD29Q8N6D5 301 aa6.48□□□□□ -1.37
VARS2-208ENST00000477052 TRAV23DV6A0A075B6W5 121 aa6.47□□□□□ -1.37
VARS2-208ENST00000477052 TCL1BO95988 128 aa6.47□□□□□ -1.37
VARS2-208ENST00000477052 MT-ATP8P03928 68 aa6.47□□□□□ -1.37
VARS2-208ENST00000477052 SSBP3-AS1Q7Z2R9 100 aa6.47□□□□□ -1.37
VARS2-208ENST00000477052 C9JAW5 83 aa6.46□□□□□ -1.38
VARS2-208ENST00000477052 H3BT86 120 aa6.46□□□□□ -1.38
VARS2-208ENST00000477052 ACYP1P07311 99 aa6.46□□□□□ -1.38
VARS2-208ENST00000477052 SMCPP49901 116 aaPredicted RBP6.46□□□□□ -1.38
VARS2-208ENST00000477052 LINC01547P58512 204 aaPredicted RBP6.46□□□□□ -1.38
VARS2-208ENST00000477052 SEC61BP60468 96 aaKnown RBP6.46□□□□□ -1.38
VARS2-208ENST00000477052 OR13C6PQ8NH95 151 aa6.46□□□□□ -1.38
VARS2-208ENST00000477052 FAM240AA0A1B0GVK7 77 aa6.45□□□□□ -1.38
VARS2-208ENST00000477052 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
VARS2-208ENST00000477052 NDUFV3P56181 108 aaKnown RBP6.45□□□□□ -1.38
VARS2-208ENST00000477052 HRCT1Q6UXD1 115 aa6.45□□□□□ -1.38
VARS2-208ENST00000477052 XP32Q5T750 250 aa6.44□□□□□ -1.38
VARS2-208ENST00000477052 TRAV13-2A0A0B4J235 113 aa6.43□□□□□ -1.38
VARS2-208ENST00000477052 A4D1N5 150 aa6.43□□□□□ -1.38
VARS2-208ENST00000477052 IMUPQ9GZP8 106 aa6.43□□□□□ -1.38
VARS2-208ENST00000477052 RPS29P62273 56 aaKnown RBP6.42□□□□□ -1.38
VARS2-208ENST00000477052 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
VARS2-208ENST00000477052 C6orf99Q4VX62 202 aa6.4□□□□□ -1.38
VARS2-208ENST00000477052 LCE2CQ5TA81 110 aa6.4□□□□□ -1.38
VARS2-208ENST00000477052 ELOF1P60002 83 aaKnown RBP6.39□□□□□ -1.39
VARS2-208ENST00000477052 SS18L2Q9UHA2 77 aa6.39□□□□□ -1.39
VARS2-208ENST00000477052 TRBV7-6A0A0J9YX20 115 aa6.38□□□□□ -1.39
VARS2-208ENST00000477052 COX7BP24311 80 aa6.38□□□□□ -1.39
VARS2-208ENST00000477052 PCOTHQ58A44 107 aa6.37□□□□□ -1.39
VARS2-208ENST00000477052 DEFB105AQ8NG35 78 aa6.37□□□□□ -1.39
VARS2-208ENST00000477052 SMIM11BQ8TCY0 68 aa6.37□□□□□ -1.39
VARS2-208ENST00000477052 H7C2G1 150 aa6.36□□□□□ -1.39
VARS2-208ENST00000477052 KRTAP19-2Q3LHN2 52 aa6.36□□□□□ -1.39
VARS2-208ENST00000477052 DHRS4-AS1Q9P1J3 65 aa6.36□□□□□ -1.39
VARS2-208ENST00000477052 A0A0G2JQZ4 141 aa6.35□□□□□ -1.39
VARS2-208ENST00000477052 TRBV7-7A0A0K0K1E9 115 aa6.35□□□□□ -1.39
VARS2-208ENST00000477052 SPRR1BP22528 89 aa6.35□□□□□ -1.39
VARS2-208ENST00000477052 LCE2DQ5TA82 110 aaPredicted RBP6.35□□□□□ -1.39
VARS2-208ENST00000477052 FSIP2Q5CZC0 6907 aa6.35□□□□□ -1.39
VARS2-208ENST00000477052 IGLV8-61A0A075B6I0 122 aa6.34□□□□□ -1.39
VARS2-208ENST00000477052 LST1O00453 97 aa6.34□□□□□ -1.39
VARS2-208ENST00000477052 TRIAP1O43715 76 aa6.34□□□□□ -1.39
VARS2-208ENST00000477052 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
VARS2-208ENST00000477052 LAMTOR3Q9UHA4 124 aa6.33□□□□□ -1.4
VARS2-208ENST00000477052 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
VARS2-208ENST00000477052 MT1HP80294 61 aa6.32□□□□□ -1.4
VARS2-208ENST00000477052 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
VARS2-208ENST00000477052 CCDC179H3BU77 68 aa6.3□□□□□ -1.4
VARS2-208ENST00000477052 UQCRQO14949 82 aa6.3□□□□□ -1.4
VARS2-208ENST00000477052 TRACP01848 142 aa6.3□□□□□ -1.4
VARS2-208ENST00000477052 SMIM20Q8N5G0 67 aa6.3□□□□□ -1.4
VARS2-208ENST00000477052 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
VARS2-208ENST00000477052 LINC00575Q6W349 94 aa6.29□□□□□ -1.4
VARS2-208ENST00000477052 SMIM29Q86T20 159 aa6.29□□□□□ -1.4
VARS2-208ENST00000477052 ATOX1O00244 68 aa6.28□□□□□ -1.4
VARS2-208ENST00000477052 IGLV5-48A0A075B6I7 105 aa6.27□□□□□ -1.41
VARS2-208ENST00000477052 C1orf195Q5TG92 126 aa6.27□□□□□ -1.41
VARS2-208ENST00000477052 A0A1B0GX51 115 aa6.26□□□□□ -1.41
VARS2-208ENST00000477052 hADV29S1A0JD25 119 aa6.26□□□□□ -1.41
VARS2-208ENST00000477052 FAM236AA0A1B0GUQ0 79 aa6.25□□□□□ -1.41
VARS2-208ENST00000477052 FAM236BA0A1B0GV22 79 aa6.25□□□□□ -1.41
VARS2-208ENST00000477052 H0YGX0 51 aa6.25□□□□□ -1.41
VARS2-208ENST00000477052 J3KT08 172 aa6.25□□□□□ -1.41
VARS2-208ENST00000477052 DNAL4O96015 105 aa6.25□□□□□ -1.41
VARS2-208ENST00000477052 RPS28P62857 69 aaKnown RBP6.25□□□□□ -1.41
VARS2-208ENST00000477052 BAALC-AS2P0C853 105 aa6.24□□□□□ -1.41
VARS2-208ENST00000477052 CD164Q04900 197 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms