RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 Q5VSD8 79 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 TTTY10Q9BZA0 68 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 C10orf95Q9H7T3 257 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 NOP10Q9NPE3 64 aaKnown RBP0.54□□□□□ -2.32
NPHP3-207ENST00000476742 PTPRQQ9UMZ3 2332 aa0.54□□□□□ -2.32
NPHP3-207ENST00000476742 RPS27P42677 84 aaKnown RBP0.53□□□□□ -2.32
NPHP3-207ENST00000476742 RPL39P62891 51 aaKnown RBP0.53□□□□□ -2.32
NPHP3-207ENST00000476742 RPS27LQ71UM5 84 aaKnown RBP0.53□□□□□ -2.32
NPHP3-207ENST00000476742 CNTRLQ7Z7A1 2325 aa0.53□□□□□ -2.33
NPHP3-207ENST00000476742 FAM208BQ5VWN6 2430 aa0.53□□□□□ -2.33
NPHP3-207ENST00000476742 ANKRD17O75179 2603 aaKnown RBP0.52□□□□□ -2.33
NPHP3-207ENST00000476742 USF3Q68DE3 2245 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 PKDREJQ9NTG1 2253 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.52□□□□□ -2.33
NPHP3-207ENST00000476742 H3BSH0 61 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 PRCDQ00LT1 54 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 KLK9Q2XQG4 91 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 LELP1Q5T871 98 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 LINC01590Q5TEZ4 76 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 RPL39LQ96EH5 51 aaKnown RBP0.52□□□□□ -2.33
NPHP3-207ENST00000476742 TOMM7Q9P0U1 55 aa0.52□□□□□ -2.33
NPHP3-207ENST00000476742 PTPRZ1P23471 2315 aaPredicted RBP0.52□□□□□ -2.33
NPHP3-207ENST00000476742 H0YGG7 62 aa0.51□□□□□ -2.33
NPHP3-207ENST00000476742 FBN2P35556 2912 aa0.51□□□□□ -2.33
NPHP3-207ENST00000476742 LEAP2Q969E1 77 aa0.51□□□□□ -2.33
NPHP3-207ENST00000476742 A0A0D9SG42 100 aa0.5□□□□□ -2.33
NPHP3-207ENST00000476742 MMP24-AS1A0A0U1RRL7 71 aa0.5□□□□□ -2.33
NPHP3-207ENST00000476742 M0QY20 66 aa0.5□□□□□ -2.33
NPHP3-207ENST00000476742 DEFB106AQ8N104 65 aa0.5□□□□□ -2.33
NPHP3-207ENST00000476742 JMJD1CQ15652 2540 aa0.49□□□□□ -2.33
NPHP3-207ENST00000476742 PDE4DIPQ5VU43 2346 aa0.49□□□□□ -2.33
NPHP3-207ENST00000476742 KNL1Q8NG31 2342 aa0.49□□□□□ -2.33
NPHP3-207ENST00000476742 A8MTW9 85 aa0.49□□□□□ -2.33
NPHP3-207ENST00000476742 SPINK1P00995 79 aa0.49□□□□□ -2.33
NPHP3-207ENST00000476742 S4R3F8 94 aa0.49□□□□□ -2.33
NPHP3-207ENST00000476742 K7EIM0 57 aa0.48□□□□□ -2.33
NPHP3-207ENST00000476742 TMEM167AQ8TBQ9 72 aa0.48□□□□□ -2.33
NPHP3-207ENST00000476742 C2CD3Q4AC94 2353 aa0.48□□□□□ -2.33
NPHP3-207ENST00000476742 ASH1LQ9NR48 2969 aaKnown RBP0.47□□□□□ -2.33
NPHP3-207ENST00000476742 CLPSL2Q6UWE3 100 aa0.47□□□□□ -2.33
NPHP3-207ENST00000476742 SPTBN2O15020 2390 aa0.47□□□□□ -2.33
NPHP3-207ENST00000476742 TPRP12270 2363 aaKnown RBP0.47□□□□□ -2.33
NPHP3-207ENST00000476742 M0QZ58 72 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 DEFB135Q30KP9 77 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 SPINK6Q6UWN8 80 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 DEFB104AQ8WTQ1 72 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 PIEZO2Q9H5I5 2752 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 AKAP6Q13023 2319 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 PCNX1Q96RV3 2341 aa0.46□□□□□ -2.34
NPHP3-207ENST00000476742 ZNF462Q96JM2 2506 aa0.45□□□□□ -2.34
NPHP3-207ENST00000476742 MUC5ACP98088 5654 aa0.45□□□□□ -2.34
NPHP3-207ENST00000476742 SPTBN1Q01082 2364 aaKnown RBP0.45□□□□□ -2.34
NPHP3-207ENST00000476742 DEFB108AA8MXU0 73 aa0.44□□□□□ -2.34
NPHP3-207ENST00000476742 M0R2T5 61 aa0.44□□□□□ -2.34
NPHP3-207ENST00000476742 SPART-AS1P0CW21 52 aa0.44□□□□□ -2.34
NPHP3-207ENST00000476742 RPL39P5Q59GN2 51 aa0.44□□□□□ -2.34
NPHP3-207ENST00000476742 CSPG4Q6UVK1 2322 aa0.44□□□□□ -2.34
NPHP3-207ENST00000476742 KMT2DO14686 5537 aa0.43□□□□□ -2.34
NPHP3-207ENST00000476742 ALMS1Q8TCU4 4167 aa0.43□□□□□ -2.34
NPHP3-207ENST00000476742 ABCA2Q9BZC7 2435 aa0.43□□□□□ -2.34
NPHP3-207ENST00000476742 C9orf92A6NGG3 77 aa0.43□□□□□ -2.34
NPHP3-207ENST00000476742 H3BUX3 64 aa0.43□□□□□ -2.34
NPHP3-207ENST00000476742 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
NPHP3-207ENST00000476742 CACNA1HO95180 2353 aa0.42□□□□□ -2.34
NPHP3-207ENST00000476742 ABCA12Q86UK0 2595 aa0.42□□□□□ -2.34
NPHP3-207ENST00000476742 TNP1P09430 55 aa0.42□□□□□ -2.34
NPHP3-207ENST00000476742 RHPN1-AS1Q9BWJ2 59 aa0.42□□□□□ -2.34
NPHP3-207ENST00000476742 U3KQA8 63 aa0.42□□□□□ -2.34
NPHP3-207ENST00000476742 F8P00451 2351 aa0.41□□□□□ -2.34
NPHP3-207ENST00000476742 ZNF292O60281 2723 aa0.41□□□□□ -2.34
NPHP3-207ENST00000476742 MEGF8Q7Z7M0 2845 aa0.41□□□□□ -2.34
NPHP3-207ENST00000476742 IGF2RP11717 2491 aa0.41□□□□□ -2.34
NPHP3-207ENST00000476742 DSPP15924 2871 aaKnown RBP0.4□□□□□ -2.34
NPHP3-207ENST00000476742 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
NPHP3-207ENST00000476742 H3BNG1 76 aa0.4□□□□□ -2.35
NPHP3-207ENST00000476742 HTN1P15515 57 aa0.4□□□□□ -2.35
NPHP3-207ENST00000476742 KRTAP19-3Q7Z4W3 81 aa0.4□□□□□ -2.35
NPHP3-207ENST00000476742 PKD1L2Q7Z442 2459 aa0.39□□□□□ -2.35
NPHP3-207ENST00000476742 CELSR2Q9HCU4 2923 aa0.39□□□□□ -2.35
NPHP3-207ENST00000476742 PRRC2CQ9Y520 2896 aaKnown RBP0.39□□□□□ -2.35
NPHP3-207ENST00000476742 GVINP1Q7Z2Y8 2422 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 TRANK1O15050 2925 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 CHD9Q3L8U1 2897 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 A0A096LNI7 61 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 APELAP0DMC3 54 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 DEFB110Q30KQ9 67 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 SMR3AQ99954 134 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 Q9Y3F1 56 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 A0A0C4DFX4 3053 aa0.38□□□□□ -2.35
NPHP3-207ENST00000476742 SRRM2Q9UQ35 2752 aaKnown RBP0.38□□□□□ -2.35
NPHP3-207ENST00000476742 COL6A5A8TX70 2615 aa0.37□□□□□ -2.35
NPHP3-207ENST00000476742 EP300Q09472 2414 aaPredicted RBP0.37□□□□□ -2.35
NPHP3-207ENST00000476742 CREBBPQ92793 2442 aa0.37□□□□□ -2.35
NPHP3-207ENST00000476742 TENM4Q6N022 2769 aa0.37□□□□□ -2.35
NPHP3-207ENST00000476742 REV3LO60673 3130 aa0.37□□□□□ -2.35
NPHP3-207ENST00000476742 ACACAQ13085 2346 aa0.37□□□□□ -2.35
NPHP3-207ENST00000476742 NCOR1O75376 2440 aa0.36□□□□□ -2.35
NPHP3-207ENST00000476742 SPTA1P02549 2419 aa0.36□□□□□ -2.35
NPHP3-207ENST00000476742 CEP290O15078 2479 aa0.36□□□□□ -2.35
NPHP3-207ENST00000476742 CELSR1Q9NYQ6 3014 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms