RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 SS18L2Q9UHA2 77 aa6.9□□□□□ -1.3
SMURF1-203ENST00000472627 NEBP20929 6669 aa6.9□□□□□ -1.31
SMURF1-203ENST00000472627 SERF1AO75920 110 aa6.89□□□□□ -1.31
SMURF1-203ENST00000472627 FABP4P15090 132 aa6.88□□□□□ -1.31
SMURF1-203ENST00000472627 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
SMURF1-203ENST00000472627 VAMP3Q15836 100 aa6.87□□□□□ -1.31
SMURF1-203ENST00000472627 OCIAD2Q56VL3 154 aa6.85□□□□□ -1.31
SMURF1-203ENST00000472627 SNAPINO95295 136 aa6.84□□□□□ -1.31
SMURF1-203ENST00000472627 SCGB1D1O95968 90 aa6.84□□□□□ -1.31
SMURF1-203ENST00000472627 NDUFA5Q16718 116 aa6.84□□□□□ -1.31
SMURF1-203ENST00000472627 SCGB1D4Q6XE38 83 aa6.83□□□□□ -1.32
SMURF1-203ENST00000472627 Q6ZVH6 145 aa6.83□□□□□ -1.32
SMURF1-203ENST00000472627 IFITM1P13164 125 aa6.82□□□□□ -1.32
SMURF1-203ENST00000472627 Q6ZQY7 126 aa6.82□□□□□ -1.32
SMURF1-203ENST00000472627 SVBPQ8N300 66 aa6.82□□□□□ -1.32
SMURF1-203ENST00000472627 MPLKIPQ8TAP9 179 aa6.82□□□□□ -1.32
SMURF1-203ENST00000472627 APOC3P02656 99 aa6.81□□□□□ -1.32
SMURF1-203ENST00000472627 KRTAP20-1Q3LI63 56 aa6.81□□□□□ -1.32
SMURF1-203ENST00000472627 HRES1P13985 223 aa6.8□□□□□ -1.32
SMURF1-203ENST00000472627 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
SMURF1-203ENST00000472627 hADV29S1A0JD25 119 aa6.79□□□□□ -1.32
SMURF1-203ENST00000472627 A8MWP4 228 aa6.79□□□□□ -1.32
SMURF1-203ENST00000472627 PPDPFLQ8WWR9 84 aa6.79□□□□□ -1.32
SMURF1-203ENST00000472627 SNHG12Q9BXW3 62 aa6.79□□□□□ -1.32
SMURF1-203ENST00000472627 DSCR10P59022 87 aa6.78□□□□□ -1.32
SMURF1-203ENST00000472627 LINC00575Q6W349 94 aa6.78□□□□□ -1.32
SMURF1-203ENST00000472627 LINC00310P59036 64 aa6.77□□□□□ -1.33
SMURF1-203ENST00000472627 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
SMURF1-203ENST00000472627 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
SMURF1-203ENST00000472627 TRGC2P03986 189 aa6.75□□□□□ -1.33
SMURF1-203ENST00000472627 YPEL4Q96NS1 127 aa6.75□□□□□ -1.33
SMURF1-203ENST00000472627 TTTY13Q9BZ97 58 aa6.75□□□□□ -1.33
SMURF1-203ENST00000472627 MUC12Q9UKN1 5478 aa6.74□□□□□ -1.33
SMURF1-203ENST00000472627 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
SMURF1-203ENST00000472627 LINC00313P59037 77 aa6.74□□□□□ -1.33
SMURF1-203ENST00000472627 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.74□□□□□ -1.33
SMURF1-203ENST00000472627 SIGMAR1Q99720 223 aa6.74□□□□□ -1.33
SMURF1-203ENST00000472627 H3BUT2 72 aa6.73□□□□□ -1.33
SMURF1-203ENST00000472627 TEN1Q86WV5 123 aa6.73□□□□□ -1.33
SMURF1-203ENST00000472627 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
SMURF1-203ENST00000472627 NOTCH2NLQ7Z3S9 236 aa6.72□□□□□ -1.33
SMURF1-203ENST00000472627 Q8N9P0 234 aaPredicted RBP6.72□□□□□ -1.33
SMURF1-203ENST00000472627 A0A087WSZ3 146 aa6.7□□□□□ -1.34
SMURF1-203ENST00000472627 LINC01545Q5VT33 79 aa6.7□□□□□ -1.34
SMURF1-203ENST00000472627 COLCA2A8K830 154 aa6.69□□□□□ -1.34
SMURF1-203ENST00000472627 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
SMURF1-203ENST00000472627 C12orf57Q99622 126 aa6.68□□□□□ -1.34
SMURF1-203ENST00000472627 SNCGO76070 127 aa6.65□□□□□ -1.34
SMURF1-203ENST00000472627 GHRHP01286 108 aa6.65□□□□□ -1.34
SMURF1-203ENST00000472627 BVES-AS1Q5T3Y7 98 aa6.65□□□□□ -1.34
SMURF1-203ENST00000472627 IGKV4-1P06312 121 aa6.63□□□□□ -1.35
SMURF1-203ENST00000472627 NDUFV3P56181 108 aaKnown RBP6.59□□□□□ -1.35
SMURF1-203ENST00000472627 SPINK7P58062 85 aa6.59□□□□□ -1.35
SMURF1-203ENST00000472627 A6NN06 94 aa6.58□□□□□ -1.36
SMURF1-203ENST00000472627 IGHV6-1A0A0B4J1U7 121 aa6.56□□□□□ -1.36
SMURF1-203ENST00000472627 H3BMG7 143 aa6.56□□□□□ -1.36
SMURF1-203ENST00000472627 C3orf79P0CE67 100 aa6.56□□□□□ -1.36
SMURF1-203ENST00000472627 KRTDAPP60985 99 aa6.55□□□□□ -1.36
SMURF1-203ENST00000472627 ZCCHC13Q8WW36 166 aaKnown RBP6.55□□□□□ -1.36
SMURF1-203ENST00000472627 WFDC13Q8IUB5 93 aa6.54□□□□□ -1.36
SMURF1-203ENST00000472627 C8orf87E5RJ46 101 aa6.53□□□□□ -1.36
SMURF1-203ENST00000472627 FAM218AQ96MZ4 157 aa6.52□□□□□ -1.37
SMURF1-203ENST00000472627 A0A1W2PNM2 257 aa6.51□□□□□ -1.37
SMURF1-203ENST00000472627 SNRPEP62304 92 aaKnown RBP6.5□□□□□ -1.37
SMURF1-203ENST00000472627 TRBV7-4A0A0J9YYF1 115 aa6.49□□□□□ -1.37
SMURF1-203ENST00000472627 FABP2P12104 132 aa6.49□□□□□ -1.37
SMURF1-203ENST00000472627 ATOH7Q8N100 152 aa6.49□□□□□ -1.37
SMURF1-203ENST00000472627 RAB37Q96AX2 223 aa6.49□□□□□ -1.37
SMURF1-203ENST00000472627 MDN1Q9NU22 5596 aa6.48□□□□□ -1.37
SMURF1-203ENST00000472627 H0YGX0 51 aa6.48□□□□□ -1.37
SMURF1-203ENST00000472627 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
SMURF1-203ENST00000472627 KRTAP5-9P26371 169 aa6.48□□□□□ -1.37
SMURF1-203ENST00000472627 DEFB116Q30KQ4 102 aa6.48□□□□□ -1.37
SMURF1-203ENST00000472627 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BKO60814 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BJP06899 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BOP23527 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BBP33778 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BDP58876 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BCP62807 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST2H2BEQ16778 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.47□□□□□ -1.37
SMURF1-203ENST00000472627 ANKRD29Q8N6D5 301 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BHQ93079 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BNQ99877 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 HIST1H2BMQ99879 126 aa6.47□□□□□ -1.37
SMURF1-203ENST00000472627 LYRM7Q5U5X0 104 aa6.46□□□□□ -1.38
SMURF1-203ENST00000472627 LINC00472Q9H8W2 130 aa6.46□□□□□ -1.38
SMURF1-203ENST00000472627 KMT2DO14686 5537 aa6.45□□□□□ -1.38
SMURF1-203ENST00000472627 A0A1B0GVX0 72 aa6.45□□□□□ -1.38
SMURF1-203ENST00000472627 DSCR8Q96T75 97 aa6.45□□□□□ -1.38
SMURF1-203ENST00000472627 TRACP01848 142 aa6.43□□□□□ -1.38
SMURF1-203ENST00000472627 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
SMURF1-203ENST00000472627 A0A1B0GX51 115 aa6.41□□□□□ -1.38
SMURF1-203ENST00000472627 HSBP1L1C9JCN9 74 aa6.41□□□□□ -1.38
SMURF1-203ENST00000472627 Q5VV11 94 aa6.41□□□□□ -1.38
SMURF1-203ENST00000472627 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
SMURF1-203ENST00000472627 CCKP06307 115 aa6.39□□□□□ -1.39
SMURF1-203ENST00000472627 H3BQ85 93 aa6.37□□□□□ -1.39
SMURF1-203ENST00000472627 J3KT08 172 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms