RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
SORT1-203ENST00000471996 TCL1BO95988 128 aa9.67□□□□□ -0.86
SORT1-203ENST00000471996 IFITM1P13164 125 aa9.67□□□□□ -0.86
SORT1-203ENST00000471996 TTTY13Q9BZ97 58 aa9.67□□□□□ -0.86
SORT1-203ENST00000471996 ELOF1P60002 83 aaKnown RBP9.66□□□□□ -0.86
SORT1-203ENST00000471996 ANKRD39Q53RE8 183 aa9.65□□□□□ -0.86
SORT1-203ENST00000471996 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
SORT1-203ENST00000471996 COX7BP24311 80 aa9.64□□□□□ -0.87
SORT1-203ENST00000471996 S100A2P29034 98 aa9.62□□□□□ -0.87
SORT1-203ENST00000471996 PCP2Q8IVA1 136 aa9.62□□□□□ -0.87
SORT1-203ENST00000471996 OBSCN-AS1Q96MR7 158 aa9.62□□□□□ -0.87
SORT1-203ENST00000471996 TRBV7-6A0A0J9YX20 115 aa9.61□□□□□ -0.87
SORT1-203ENST00000471996 ATOH7Q8N100 152 aa9.61□□□□□ -0.87
SORT1-203ENST00000471996 HIST3H2BBQ8N257 126 aa9.61□□□□□ -0.87
SORT1-203ENST00000471996 KRTAP10-10P60014 251 aa9.6□□□□□ -0.87
SORT1-203ENST00000471996 TRBV20-1A0A075B6N2 111 aa9.59□□□□□ -0.87
SORT1-203ENST00000471996 KRTAP6-3Q3LI67 103 aa9.59□□□□□ -0.87
SORT1-203ENST00000471996 KRTAP19-6Q3LI70 58 aa9.59□□□□□ -0.87
SORT1-203ENST00000471996 C6orf99Q4VX62 202 aa9.59□□□□□ -0.87
SORT1-203ENST00000471996 HIST1H2BLQ99880 126 aa9.59□□□□□ -0.87
SORT1-203ENST00000471996 IGLV5-48A0A075B6I7 105 aa9.58□□□□□ -0.88
SORT1-203ENST00000471996 S100A6P06703 90 aa9.58□□□□□ -0.88
SORT1-203ENST00000471996 MUSTN1Q8IVN3 82 aa9.58□□□□□ -0.88
SORT1-203ENST00000471996 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
SORT1-203ENST00000471996 TRAV13-2A0A0B4J235 113 aa9.55□□□□□ -0.88
SORT1-203ENST00000471996 A0A1B0GWB2 263 aa9.55□□□□□ -0.88
SORT1-203ENST00000471996 A6NDN8 102 aa9.55□□□□□ -0.88
SORT1-203ENST00000471996 A4D1N5 150 aa9.54□□□□□ -0.88
SORT1-203ENST00000471996 NHP2Q9NX24 153 aaKnown RBP9.5□□□□□ -0.89
SORT1-203ENST00000471996 Q96NJ1 140 aa9.49□□□□□ -0.89
SORT1-203ENST00000471996 NEBP20929 6669 aa9.48□□□□□ -0.89
SORT1-203ENST00000471996 VAMP3Q15836 100 aa9.46□□□□□ -0.9
SORT1-203ENST00000471996 C20orf166-AS1Q96NR2 134 aa9.46□□□□□ -0.9
SORT1-203ENST00000471996 SCGB1D1O95968 90 aa9.45□□□□□ -0.9
SORT1-203ENST00000471996 SMIM11BQ8TCY0 68 aa9.45□□□□□ -0.9
SORT1-203ENST00000471996 TRBV7-7A0A0K0K1E9 115 aa9.44□□□□□ -0.9
SORT1-203ENST00000471996 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
SORT1-203ENST00000471996 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
SORT1-203ENST00000471996 A8MUU9 505 aa9.43□□□□□ -0.9
SORT1-203ENST00000471996 IGFL1Q6UW32 110 aa9.42□□□□□ -0.9
SORT1-203ENST00000471996 F8WEM9 126 aa9.41□□□□□ -0.9
SORT1-203ENST00000471996 DLEU1O43261 78 aa9.4□□□□□ -0.9
SORT1-203ENST00000471996 COX8AP10176 69 aa9.4□□□□□ -0.9
SORT1-203ENST00000471996 Q6JHZ5 121 aa9.38□□□□□ -0.91
SORT1-203ENST00000471996 HIST1H4GQ99525 98 aa9.38□□□□□ -0.91
SORT1-203ENST00000471996 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
SORT1-203ENST00000471996 CLEC2BQ92478 149 aa9.37□□□□□ -0.91
SORT1-203ENST00000471996 LST1O00453 97 aa9.35□□□□□ -0.91
SORT1-203ENST00000471996 hADV29S1A0JD25 119 aa9.34□□□□□ -0.91
SORT1-203ENST00000471996 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
SORT1-203ENST00000471996 MPLKIPQ8TAP9 179 aa9.34□□□□□ -0.91
SORT1-203ENST00000471996 RBM12B-AS1Q9P1G2 102 aa9.33□□□□□ -0.92
SORT1-203ENST00000471996 HIGD1BQ9P298 99 aa9.33□□□□□ -0.92
SORT1-203ENST00000471996 KRTAP16-1A8MUX0 517 aa9.31□□□□□ -0.92
SORT1-203ENST00000471996 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.3□□□□□ -0.92
SORT1-203ENST00000471996 Q6ZQY7 126 aa9.3□□□□□ -0.92
SORT1-203ENST00000471996 PPDPFLQ8WWR9 84 aa9.3□□□□□ -0.92
SORT1-203ENST00000471996 HRES1P13985 223 aa9.29□□□□□ -0.92
SORT1-203ENST00000471996 SPATA45Q537H7 98 aa9.29□□□□□ -0.92
SORT1-203ENST00000471996 OCIAD2Q56VL3 154 aa9.28□□□□□ -0.92
SORT1-203ENST00000471996 C14orf144Q96I85 54 aa9.28□□□□□ -0.92
SORT1-203ENST00000471996 VAMP8Q9BV40 100 aa9.28□□□□□ -0.92
SORT1-203ENST00000471996 PAM16Q9Y3D7 125 aa9.28□□□□□ -0.92
SORT1-203ENST00000471996 MUC12Q9UKN1 5478 aa9.27□□□□□ -0.92
SORT1-203ENST00000471996 C12orf57Q99622 126 aa9.27□□□□□ -0.93
SORT1-203ENST00000471996 SNCGO76070 127 aa9.26□□□□□ -0.93
SORT1-203ENST00000471996 RAB37Q96AX2 223 aa9.26□□□□□ -0.93
SORT1-203ENST00000471996 A0A0B4J2C4 111 aa9.25□□□□□ -0.93
SORT1-203ENST00000471996 H0YGX0 51 aa9.24□□□□□ -0.93
SORT1-203ENST00000471996 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
SORT1-203ENST00000471996 A6NJY4 79 aa9.21□□□□□ -0.94
SORT1-203ENST00000471996 KRTAP20-1Q3LI63 56 aa9.21□□□□□ -0.94
SORT1-203ENST00000471996 C2orf91Q6ZV80 131 aa9.21□□□□□ -0.94
SORT1-203ENST00000471996 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.94
SORT1-203ENST00000471996 DSCR10P59022 87 aa9.2□□□□□ -0.94
SORT1-203ENST00000471996 CEND1Q8N111 149 aa9.2□□□□□ -0.94
SORT1-203ENST00000471996 SS18L2Q9UHA2 77 aa9.2□□□□□ -0.94
SORT1-203ENST00000471996 GHRHP01286 108 aa9.19□□□□□ -0.94
SORT1-203ENST00000471996 NOTCH2NLQ7Z3S9 236 aa9.19□□□□□ -0.94
SORT1-203ENST00000471996 A0A1B0GX51 115 aa9.18□□□□□ -0.94
SORT1-203ENST00000471996 PRO1854Q9UHT4 67 aa9.17□□□□□ -0.94
SORT1-203ENST00000471996 H3BUT2 72 aa9.14□□□□□ -0.95
SORT1-203ENST00000471996 A8MWP4 228 aa9.12□□□□□ -0.95
SORT1-203ENST00000471996 PYY3Q5JQD4 70 aa9.12□□□□□ -0.95
SORT1-203ENST00000471996 MTURNQ8N3F0 131 aa9.12□□□□□ -0.95
SORT1-203ENST00000471996 Q8N9P0 234 aaPredicted RBP9.12□□□□□ -0.95
SORT1-203ENST00000471996 FXYD2P54710 66 aa9.11□□□□□ -0.95
SORT1-203ENST00000471996 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
SORT1-203ENST00000471996 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
SORT1-203ENST00000471996 LINC00313P59037 77 aa9.09□□□□□ -0.95
SORT1-203ENST00000471996 HSD52Q0P140 79 aa9.09□□□□□ -0.95
SORT1-203ENST00000471996 A0A087WSZ3 146 aa9.07□□□□□ -0.96
SORT1-203ENST00000471996 H3BQ85 93 aa9.07□□□□□ -0.96
SORT1-203ENST00000471996 TEN1Q86WV5 123 aa9.07□□□□□ -0.96
SORT1-203ENST00000471996 TRIAP1O43715 76 aa9.05□□□□□ -0.96
SORT1-203ENST00000471996 COX6CP09669 75 aa9.04□□□□□ -0.96
SORT1-203ENST00000471996 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
SORT1-203ENST00000471996 UQCR10Q9UDW1 63 aa9.04□□□□□ -0.96
SORT1-203ENST00000471996 H3BMG7 143 aa9.03□□□□□ -0.96
SORT1-203ENST00000471996 FABP2P12104 132 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms