RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 C1orf195Q5TG92 126 aa3.56□□□□□ -1.84
HDAC1-204ENST00000471488 OR13C6PQ8NH95 151 aa3.56□□□□□ -1.84
HDAC1-204ENST00000471488 TRBV20-1A0A075B6N2 111 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 FAM236DA0A1B0GTK5 79 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 MYMXA0A1B0GTQ4 84 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 LCE2BO14633 110 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 HBDP02042 147 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 FAM236CP0DP71 79 aa3.55□□□□□ -1.84
HDAC1-204ENST00000471488 SPANXB1Q9NS25 103 aaPredicted RBP3.55□□□□□ -1.84
HDAC1-204ENST00000471488 TRBV10-2A0A0K0K1G8 114 aa3.54□□□□□ -1.84
HDAC1-204ENST00000471488 LINC01546A6NGU7 62 aa3.54□□□□□ -1.84
HDAC1-204ENST00000471488 MT2AP02795 61 aa3.54□□□□□ -1.84
HDAC1-204ENST00000471488 LINC00310P59036 64 aa3.54□□□□□ -1.84
HDAC1-204ENST00000471488 OBSCN-AS1Q96MR7 158 aa3.54□□□□□ -1.84
HDAC1-204ENST00000471488 F8W1H4 67 aa3.53□□□□□ -1.84
HDAC1-204ENST00000471488 J3KT08 172 aa3.53□□□□□ -1.84
HDAC1-204ENST00000471488 SMIM29Q86T20 159 aa3.53□□□□□ -1.84
HDAC1-204ENST00000471488 A0A096LNJ9 63 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 TCL1BO95988 128 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 CD164Q04900 197 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 C18orf32Q8TCD1 76 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 PMCHL2Q9BQD1 86 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 DHRS4-AS1Q9P1J3 65 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 V9GYY9 64 aa3.52□□□□□ -1.85
HDAC1-204ENST00000471488 A0A1W2PPM0 123 aa3.51□□□□□ -1.85
HDAC1-204ENST00000471488 CCDC179H3BU77 68 aa3.51□□□□□ -1.85
HDAC1-204ENST00000471488 MT1FP04733 61 aa3.51□□□□□ -1.85
HDAC1-204ENST00000471488 C9JAW5 83 aa3.5□□□□□ -1.85
HDAC1-204ENST00000471488 MT-ATP8P03928 68 aa3.5□□□□□ -1.85
HDAC1-204ENST00000471488 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
HDAC1-204ENST00000471488 SPRR1BP22528 89 aa3.5□□□□□ -1.85
HDAC1-204ENST00000471488 NDUFV3P56181 108 aaKnown RBP3.5□□□□□ -1.85
HDAC1-204ENST00000471488 TRAPPC1Q9Y5R8 145 aa3.5□□□□□ -1.85
HDAC1-204ENST00000471488 SPCS1Q9Y6A9 102 aa3.5□□□□□ -1.85
HDAC1-204ENST00000471488 TEX49A0A1B0GTD5 131 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 SERF1AO75920 110 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 C3orf79P0CE67 100 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 FABP2P12104 132 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 COX7BP24311 80 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 TSPEAR-AS2P59090 65 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 KRTDAPP60985 99 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 Q96NJ1 140 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 C20orf166-AS1Q96NR2 134 aa3.49□□□□□ -1.85
HDAC1-204ENST00000471488 NDUFC2O95298 119 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 IFITM1P13164 125 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 IFI27L1Q96BM0 104 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 URB1-AS1Q96HZ7 61 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 NAA38Q9BRA0 125 aaKnown RBP3.48□□□□□ -1.85
HDAC1-204ENST00000471488 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 KRTAP9-3Q9BYQ3 159 aa3.48□□□□□ -1.85
HDAC1-204ENST00000471488 SYS1-DBNDD2H3BUS1 97 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 H3BUT2 72 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 J3QQQ9 107 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 LEPROTO15243 131 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 Q5XG85 94 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 Q75L30 129 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 PRO0461Q9UI25 63 aa3.47□□□□□ -1.85
HDAC1-204ENST00000471488 TRAV12-1A0A0B4J245 112 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 LOC107984156A0A0G2JMH3 177 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 EIF4EBP3O60516 100 aaPredicted RBP3.46□□□□□ -1.86
HDAC1-204ENST00000471488 C6orf99Q4VX62 202 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 C2orf91Q6ZV80 131 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 ARL17AQ8IVW1 177 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 ATOH7Q8N100 152 aa3.46□□□□□ -1.86
HDAC1-204ENST00000471488 F8WEM9 126 aa3.45□□□□□ -1.86
HDAC1-204ENST00000471488 H3BMG7 143 aa3.45□□□□□ -1.86
HDAC1-204ENST00000471488 HSBP1O75506 76 aa3.45□□□□□ -1.86
HDAC1-204ENST00000471488 NMUP48645 174 aa3.45□□□□□ -1.86
HDAC1-204ENST00000471488 HERVK_113P61574 105 aa3.45□□□□□ -1.86
HDAC1-204ENST00000471488 E9PLD3 99 aa3.44□□□□□ -1.86
HDAC1-204ENST00000471488 COX8AP10176 69 aa3.44□□□□□ -1.86
HDAC1-204ENST00000471488 ELOF1P60002 83 aaKnown RBP3.44□□□□□ -1.86
HDAC1-204ENST00000471488 C4orf26Q17RF5 130 aa3.44□□□□□ -1.86
HDAC1-204ENST00000471488 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
HDAC1-204ENST00000471488 ETDBQ3ZM63 59 aa3.44□□□□□ -1.86
HDAC1-204ENST00000471488 ADAMTSL4-AS1Q5T5F5 129 aa3.44□□□□□ -1.86
HDAC1-204ENST00000471488 IGFL1Q6UW32 110 aa3.43□□□□□ -1.86
HDAC1-204ENST00000471488 PPDPFLQ8WWR9 84 aa3.43□□□□□ -1.86
HDAC1-204ENST00000471488 RBM12B-AS1Q9P1G2 102 aa3.43□□□□□ -1.86
HDAC1-204ENST00000471488 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
HDAC1-204ENST00000471488 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
HDAC1-204ENST00000471488 NEBP20929 6669 aa3.42□□□□□ -1.86
HDAC1-204ENST00000471488 PLNP26678 52 aa3.41□□□□□ -1.86
HDAC1-204ENST00000471488 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
HDAC1-204ENST00000471488 LST1O00453 97 aa3.4□□□□□ -1.87
HDAC1-204ENST00000471488 UQCRQO14949 82 aa3.4□□□□□ -1.87
HDAC1-204ENST00000471488 SNCGO76070 127 aa3.4□□□□□ -1.87
HDAC1-204ENST00000471488 DPM2O94777 84 aa3.4□□□□□ -1.87
HDAC1-204ENST00000471488 CHCHD1Q96BP2 118 aaKnown RBP3.4□□□□□ -1.87
HDAC1-204ENST00000471488 TRBV7-7A0A0K0K1E9 115 aa3.39□□□□□ -1.87
HDAC1-204ENST00000471488 A0A1B0GWB2 263 aa3.39□□□□□ -1.87
HDAC1-204ENST00000471488 IGKCP01834 107 aa3.39□□□□□ -1.87
HDAC1-204ENST00000471488 Q8N9P0 234 aaPredicted RBP3.39□□□□□ -1.87
HDAC1-204ENST00000471488 HIGD1BQ9P298 99 aa3.39□□□□□ -1.87
HDAC1-204ENST00000471488 IGLV5-48A0A075B6I7 105 aa3.38□□□□□ -1.87
HDAC1-204ENST00000471488 LEPROTL1O95214 131 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms