RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
USP11-206ENST00000469080 Q8N9P0 234 aaPredicted RBP8.05□□□□□ -1.12
USP11-206ENST00000469080 B9D2Q9BPU9 175 aa8.05□□□□□ -1.12
USP11-206ENST00000469080 PRR34Q9NV39 138 aa8.05□□□□□ -1.12
USP11-206ENST00000469080 COX17Q14061 63 aa8.04□□□□□ -1.12
USP11-206ENST00000469080 ST20-AS1Q8NBB2 130 aa8.03□□□□□ -1.12
USP11-206ENST00000469080 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
USP11-206ENST00000469080 DNAH10OSP0CZ25 163 aa8.01□□□□□ -1.13
USP11-206ENST00000469080 EGFEM1PQ0D2K5 195 aa8.01□□□□□ -1.13
USP11-206ENST00000469080 LINC01556Q5JQF7 62 aa8.01□□□□□ -1.13
USP11-206ENST00000469080 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
USP11-206ENST00000469080 MOBPQ13875 183 aa8.01□□□□□ -1.13
USP11-206ENST00000469080 PRLHP81277 87 aa8□□□□□ -1.13
USP11-206ENST00000469080 VPREB1P12018 145 aa7.99□□□□□ -1.13
USP11-206ENST00000469080 C7orf33Q8WU49 177 aa7.99□□□□□ -1.13
USP11-206ENST00000469080 LINC01554Q52M75 96 aa7.99□□□□□ -1.13
USP11-206ENST00000469080 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
USP11-206ENST00000469080 DEFB116Q30KQ4 102 aa7.98□□□□□ -1.13
USP11-206ENST00000469080 LINC00313P59037 77 aa7.98□□□□□ -1.13
USP11-206ENST00000469080 NDUFB1O75438 58 aa7.97□□□□□ -1.13
USP11-206ENST00000469080 MP68P56378 58 aa7.96□□□□□ -1.14
USP11-206ENST00000469080 Q75L30 129 aa7.95□□□□□ -1.14
USP11-206ENST00000469080 ZCCHC13Q8WW36 166 aaKnown RBP7.95□□□□□ -1.14
USP11-206ENST00000469080 LY6G6CO95867 125 aa7.95□□□□□ -1.14
USP11-206ENST00000469080 KRTAP1-5Q9BYS1 174 aa7.95□□□□□ -1.14
USP11-206ENST00000469080 ADM2Q7Z4H4 148 aa7.94□□□□□ -1.14
USP11-206ENST00000469080 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
USP11-206ENST00000469080 H3BQ85 93 aa7.93□□□□□ -1.14
USP11-206ENST00000469080 WFDC13Q8IUB5 93 aa7.91□□□□□ -1.14
USP11-206ENST00000469080 IGLV6-57P01721 117 aa7.91□□□□□ -1.14
USP11-206ENST00000469080 SPAG11AQ6PDA7 123 aa7.91□□□□□ -1.14
USP11-206ENST00000469080 CASC2Q6XLA1 102 aa7.9□□□□□ -1.15
USP11-206ENST00000469080 H3BNG1 76 aa7.89□□□□□ -1.15
USP11-206ENST00000469080 KRTAP26-1Q6PEX3 210 aa7.88□□□□□ -1.15
USP11-206ENST00000469080 LCE6AA0A183 80 aa7.88□□□□□ -1.15
USP11-206ENST00000469080 LYSTQ99698 3801 aa7.87□□□□□ -1.15
USP11-206ENST00000469080 GVQW2A0A096LPI5 108 aaPredicted RBP7.87□□□□□ -1.15
USP11-206ENST00000469080 SPINK7P58062 85 aa7.87□□□□□ -1.15
USP11-206ENST00000469080 DNHD1Q96M86 4753 aa7.87□□□□□ -1.15
USP11-206ENST00000469080 CMYA5Q8N3K9 4069 aa7.86□□□□□ -1.15
USP11-206ENST00000469080 K7EQZ3 153 aa7.86□□□□□ -1.15
USP11-206ENST00000469080 ELOF1P60002 83 aaKnown RBP7.86□□□□□ -1.15
USP11-206ENST00000469080 COA5Q86WW8 74 aa7.85□□□□□ -1.15
USP11-206ENST00000469080 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
USP11-206ENST00000469080 IGLV9-49A0A0B4J1Y8 123 aa7.83□□□□□ -1.16
USP11-206ENST00000469080 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
USP11-206ENST00000469080 RETNLBQ9BQ08 111 aa7.83□□□□□ -1.16
USP11-206ENST00000469080 REG3GQ6UW15 175 aa7.82□□□□□ -1.16
USP11-206ENST00000469080 C1orf137Q5JT78 98 aa7.81□□□□□ -1.16
USP11-206ENST00000469080 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
USP11-206ENST00000469080 H0Y9P7 68 aa7.8□□□□□ -1.16
USP11-206ENST00000469080 Q9BRP9 147 aa7.8□□□□□ -1.16
USP11-206ENST00000469080 ANAPC11Q9NYG5 84 aa7.8□□□□□ -1.16
USP11-206ENST00000469080 DNAH10Q8IVF4 4471 aa7.8□□□□□ -1.16
USP11-206ENST00000469080 MEGF8Q7Z7M0 2845 aa7.79□□□□□ -1.16
USP11-206ENST00000469080 Q8N377 158 aa7.79□□□□□ -1.16
USP11-206ENST00000469080 NBDYA0A0U1RRE5 68 aa7.78□□□□□ -1.16
USP11-206ENST00000469080 DSCR10P59022 87 aa7.78□□□□□ -1.16
USP11-206ENST00000469080 APLNQ9ULZ1 77 aa7.78□□□□□ -1.16
USP11-206ENST00000469080 Q6ZRX8 168 aa7.77□□□□□ -1.17
USP11-206ENST00000469080 HUWE1Q7Z6Z7 4374 aaKnown RBP7.76□□□□□ -1.17
USP11-206ENST00000469080 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
USP11-206ENST00000469080 A0A087WSZ3 146 aa7.76□□□□□ -1.17
USP11-206ENST00000469080 PCOTHQ58A44 107 aa7.76□□□□□ -1.17
USP11-206ENST00000469080 LINC00476Q8WZB0 136 aa7.76□□□□□ -1.17
USP11-206ENST00000469080 PANO1I0J062 215 aa7.75□□□□□ -1.17
USP11-206ENST00000469080 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
USP11-206ENST00000469080 NUPR2A6NF83 97 aa7.75□□□□□ -1.17
USP11-206ENST00000469080 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
USP11-206ENST00000469080 A0A1W2PNM2 257 aa7.74□□□□□ -1.17
USP11-206ENST00000469080 RPL37AP61513 92 aaKnown RBP7.74□□□□□ -1.17
USP11-206ENST00000469080 DHRS4-AS1Q9P1J3 65 aa7.74□□□□□ -1.17
USP11-206ENST00000469080 SPINK6Q6UWN8 80 aa7.73□□□□□ -1.17
USP11-206ENST00000469080 H0Y9J4 135 aa7.72□□□□□ -1.17
USP11-206ENST00000469080 KRTAP7-1Q8IUC3 87 aa7.72□□□□□ -1.17
USP11-206ENST00000469080 LINC01558Q9Y6Z2 57 aa7.72□□□□□ -1.17
USP11-206ENST00000469080 C14orf177Q52M58 125 aa7.71□□□□□ -1.18
USP11-206ENST00000469080 KRTAP11-1Q8IUC1 163 aa7.71□□□□□ -1.18
USP11-206ENST00000469080 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.7□□□□□ -1.18
USP11-206ENST00000469080 IGLV5-52A0A0A0MRZ9 124 aa7.69□□□□□ -1.18
USP11-206ENST00000469080 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
USP11-206ENST00000469080 PLA2G1BP04054 148 aaKnown RBP7.68□□□□□ -1.18
USP11-206ENST00000469080 Q8NBF4 154 aa7.67□□□□□ -1.18
USP11-206ENST00000469080 RTL8CO15255 209 aa7.66□□□□□ -1.18
USP11-206ENST00000469080 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
USP11-206ENST00000469080 PRKDCP78527 4128 aaKnown RBP7.65□□□□□ -1.19
USP11-206ENST00000469080 DNAH3Q8TD57 4116 aa7.64□□□□□ -1.19
USP11-206ENST00000469080 C9orf163Q8N9P6 203 aa7.63□□□□□ -1.19
USP11-206ENST00000469080 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
USP11-206ENST00000469080 A0A087WTM6 91 aa7.62□□□□□ -1.19
USP11-206ENST00000469080 TNP2Q05952 138 aa7.62□□□□□ -1.19
USP11-206ENST00000469080 IGFL1Q6UW32 110 aa7.62□□□□□ -1.19
USP11-206ENST00000469080 PLECQ15149 4684 aaKnown RBP7.61□□□□□ -1.19
USP11-206ENST00000469080 TLX1NBP0CAT3 122 aa7.61□□□□□ -1.19
USP11-206ENST00000469080 CIRBP-AS1Q8TBR5 109 aa7.61□□□□□ -1.19
USP11-206ENST00000469080 H3BPC8 53 aa7.61□□□□□ -1.19
USP11-206ENST00000469080 DNAH9Q9NYC9 4486 aa7.61□□□□□ -1.19
USP11-206ENST00000469080 IGLV7-46A0A075B6I9 117 aa7.61□□□□□ -1.19
USP11-206ENST00000469080 Q6ZR54 194 aa7.58□□□□□ -1.2
USP11-206ENST00000469080 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms