RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	PRO1854	Q9UHT4	67 aa		6.1	□□□□□ -1.43
PTPN7-204	ENST00000462815	LOR	P23490	312 aa	Predicted RBP	6.09	□□□□□ -1.43
PTPN7-204	ENST00000462815	S100A7L2	Q5SY68	101 aa		6.09	□□□□□ -1.43
PTPN7-204	ENST00000462815	OR13C6P	Q8NH95	151 aa		6.09	□□□□□ -1.43
PTPN7-204	ENST00000462815	RAB37	Q96AX2	223 aa		6.09	□□□□□ -1.43
PTPN7-204	ENST00000462815	BATF	Q16520	125 aa		6.08	□□□□□ -1.44
PTPN7-204	ENST00000462815	SMIM11B	Q8TCY0	68 aa		6.07	□□□□□ -1.44
PTPN7-204	ENST00000462815	TRAV23DV6	A0A075B6W5	121 aa		6.06	□□□□□ -1.44
PTPN7-204	ENST00000462815		H7C2G1	150 aa		6.05	□□□□□ -1.44
PTPN7-204	ENST00000462815	TAX1BP3	O14907	124 aa		6.05	□□□□□ -1.44
PTPN7-204	ENST00000462815	KRTAP10-6	P60371	365 aa	Predicted RBP	6.05	□□□□□ -1.44
PTPN7-204	ENST00000462815	PCOTH	Q58A44	107 aa		6.05	□□□□□ -1.44
PTPN7-204	ENST00000462815	ST20-AS1	Q8NBB2	130 aa		6.05	□□□□□ -1.44
PTPN7-204	ENST00000462815	ZNF73	O43830	326 aa	Predicted RBP	6.04	□□□□□ -1.44
PTPN7-204	ENST00000462815	C6orf99	Q4VX62	202 aa		6.03	□□□□□ -1.44
PTPN7-204	ENST00000462815	CBY1	Q9Y3M2	126 aa		6.03	□□□□□ -1.44
PTPN7-204	ENST00000462815	IGLV8-61	A0A075B6I0	122 aa		6.02	□□□□□ -1.45
PTPN7-204	ENST00000462815	TRBV7-6	A0A0J9YX20	115 aa		6.02	□□□□□ -1.45
PTPN7-204	ENST00000462815	SPRR1B	P22528	89 aa		6.02	□□□□□ -1.45
PTPN7-204	ENST00000462815	COL5A1-AS1	Q5SY13	56 aa		6.02	□□□□□ -1.45
PTPN7-204	ENST00000462815	C9orf153	Q5TBE3	101 aa		6.02	□□□□□ -1.45
PTPN7-204	ENST00000462815	C9orf118	A6NHY6	69 aa		6.01	□□□□□ -1.45
PTPN7-204	ENST00000462815	TRIAP1	O43715	76 aa		6.01	□□□□□ -1.45
PTPN7-204	ENST00000462815		Q1RN00	199 aa		6.01	□□□□□ -1.45
PTPN7-204	ENST00000462815	NAA38	Q9BRA0	125 aa	Known RBP	6.01	□□□□□ -1.45
PTPN7-204	ENST00000462815	ELOF1	P60002	83 aa	Known RBP	6	□□□□□ -1.45
PTPN7-204	ENST00000462815	C9orf92	A6NGG3	77 aa		5.99	□□□□□ -1.45
PTPN7-204	ENST00000462815	COX7B	P24311	80 aa		5.99	□□□□□ -1.45
PTPN7-204	ENST00000462815		H0YGX0	51 aa		5.98	□□□□□ -1.45
PTPN7-204	ENST00000462815		H3BUT2	72 aa		5.98	□□□□□ -1.45
PTPN7-204	ENST00000462815	PSMB2	P49721	201 aa		5.98	□□□□□ -1.45
PTPN7-204	ENST00000462815	VAMP3	Q15836	100 aa		5.98	□□□□□ -1.45
PTPN7-204	ENST00000462815		M0R2T5	61 aa		5.97	□□□□□ -1.45
PTPN7-204	ENST00000462815	LINC00575	Q6W349	94 aa		5.97	□□□□□ -1.45
PTPN7-204	ENST00000462815	FAM218A	Q96MZ4	157 aa		5.97	□□□□□ -1.45
PTPN7-204	ENST00000462815	LIMD2	Q9BT23	127 aa		5.97	□□□□□ -1.45
PTPN7-204	ENST00000462815	COX6C	P09669	75 aa		5.96	□□□□□ -1.46
PTPN7-204	ENST00000462815	HRCT1	Q6UXD1	115 aa		5.96	□□□□□ -1.46
PTPN7-204	ENST00000462815	CLEC2B	Q92478	149 aa		5.96	□□□□□ -1.46
PTPN7-204	ENST00000462815		A0A1W2PPM0	123 aa		5.95	□□□□□ -1.46
PTPN7-204	ENST00000462815	SCGB1C2	P0DMR2	95 aa		5.95	□□□□□ -1.46
PTPN7-204	ENST00000462815		Q5XG85	94 aa		5.94	□□□□□ -1.46
PTPN7-204	ENST00000462815	DHRS4-AS1	Q9P1J3	65 aa		5.94	□□□□□ -1.46
PTPN7-204	ENST00000462815	SSPO	A2VEC9	5147 aa		5.94	□□□□□ -1.46
PTPN7-204	ENST00000462815		A0A1B0GX51	115 aa		5.93	□□□□□ -1.46
PTPN7-204	ENST00000462815	hADV29S1	A0JD25	119 aa		5.93	□□□□□ -1.46
PTPN7-204	ENST00000462815	LST1	O00453	97 aa		5.93	□□□□□ -1.46
PTPN7-204	ENST00000462815	TCL1B	O95988	128 aa		5.93	□□□□□ -1.46
PTPN7-204	ENST00000462815	CD164	Q04900	197 aa		5.93	□□□□□ -1.46
PTPN7-204	ENST00000462815	USH2A	O75445	5202 aa		5.93	□□□□□ -1.46
PTPN7-204	ENST00000462815	FABP2	P12104	132 aa		5.92	□□□□□ -1.46
PTPN7-204	ENST00000462815	RPL37	P61927	97 aa	Known RBP	5.92	□□□□□ -1.46
PTPN7-204	ENST00000462815	C1orf195	Q5TG92	126 aa		5.92	□□□□□ -1.46
PTPN7-204	ENST00000462815	SMIM29	Q86T20	159 aa		5.92	□□□□□ -1.46
PTPN7-204	ENST00000462815	TRBV20-1	A0A075B6N2	111 aa		5.9	□□□□□ -1.46
PTPN7-204	ENST00000462815	TRAC	P01848	142 aa		5.9	□□□□□ -1.46
PTPN7-204	ENST00000462815	LYRM7	Q5U5X0	104 aa		5.9	□□□□□ -1.46
PTPN7-204	ENST00000462815	COX6B2	Q6YFQ2	88 aa		5.9	□□□□□ -1.46
PTPN7-204	ENST00000462815	LAMTOR3	Q9UHA4	124 aa		5.9	□□□□□ -1.46
PTPN7-204	ENST00000462815	IGLV5-48	A0A075B6I7	105 aa		5.89	□□□□□ -1.47
PTPN7-204	ENST00000462815	ATXN8	Q156A1	80 aa		5.89	□□□□□ -1.47
PTPN7-204	ENST00000462815	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	5.89	□□□□□ -1.47
PTPN7-204	ENST00000462815		Q6ZQY7	126 aa		5.89	□□□□□ -1.47
PTPN7-204	ENST00000462815	SPCS1	Q9Y6A9	102 aa		5.89	□□□□□ -1.47
PTPN7-204	ENST00000462815		A0A0G2JQZ4	141 aa		5.88	□□□□□ -1.47
PTPN7-204	ENST00000462815		K7EP34	96 aa		5.87	□□□□□ -1.47
PTPN7-204	ENST00000462815	SNCG	O76070	127 aa		5.87	□□□□□ -1.47
PTPN7-204	ENST00000462815	TEX49	A0A1B0GTD5	131 aa		5.86	□□□□□ -1.47
PTPN7-204	ENST00000462815		A0A1B0GV90	55 aa		5.86	□□□□□ -1.47
PTPN7-204	ENST00000462815	KRTAP9-7	A8MTY7	169 aa		5.86	□□□□□ -1.47
PTPN7-204	ENST00000462815		H3BMG7	143 aa		5.86	□□□□□ -1.47
PTPN7-204	ENST00000462815	DNAL4	O96015	105 aa		5.85	□□□□□ -1.47
PTPN7-204	ENST00000462815	OCIAD2	Q56VL3	154 aa		5.85	□□□□□ -1.47
PTPN7-204	ENST00000462815	DEFB105A	Q8NG35	78 aa		5.85	□□□□□ -1.47
PTPN7-204	ENST00000462815	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	5.84	□□□□□ -1.47
PTPN7-204	ENST00000462815	PPDPFL	Q8WWR9	84 aa		5.84	□□□□□ -1.47
PTPN7-204	ENST00000462815	ORMDL1	Q9P0S3	153 aa		5.84	□□□□□ -1.47
PTPN7-204	ENST00000462815		C9JAW5	83 aa		5.83	□□□□□ -1.48
PTPN7-204	ENST00000462815	BAALC-AS2	P0C853	105 aa		5.83	□□□□□ -1.48
PTPN7-204	ENST00000462815	GTF2H5	Q6ZYL4	71 aa		5.83	□□□□□ -1.48
PTPN7-204	ENST00000462815	PRO0461	Q9UI25	63 aa		5.83	□□□□□ -1.48
PTPN7-204	ENST00000462815		H3BQ85	93 aa		5.82	□□□□□ -1.48
PTPN7-204	ENST00000462815	SMCP	P49901	116 aa	Predicted RBP	5.82	□□□□□ -1.48
PTPN7-204	ENST00000462815	TMEM256-PLSCR3	K7ERE1	68 aa		5.81	□□□□□ -1.48
PTPN7-204	ENST00000462815	GHRH	P01286	108 aa		5.81	□□□□□ -1.48
PTPN7-204	ENST00000462815	MTURN	Q8N3F0	131 aa		5.81	□□□□□ -1.48
PTPN7-204	ENST00000462815	UBE2V1	Q13404	147 aa		5.8	□□□□□ -1.48
PTPN7-204	ENST00000462815		Q6Q795	121 aa		5.8	□□□□□ -1.48
PTPN7-204	ENST00000462815	KRTAP9-8	Q9BYQ0	159 aa		5.8	□□□□□ -1.48
PTPN7-204	ENST00000462815		H3BT86	120 aa		5.79	□□□□□ -1.48
PTPN7-204	ENST00000462815	NDUFV3	P56181	108 aa	Known RBP	5.79	□□□□□ -1.48
PTPN7-204	ENST00000462815	ANKRD29	Q8N6D5	301 aa		5.79	□□□□□ -1.48
PTPN7-204	ENST00000462815	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.78	□□□□□ -1.48
PTPN7-204	ENST00000462815		F8W1H4	67 aa		5.77	□□□□□ -1.49
PTPN7-204	ENST00000462815	OBSCN-AS1	Q96MR7	158 aa		5.76	□□□□□ -1.49
PTPN7-204	ENST00000462815		Q75L30	129 aa		5.75	□□□□□ -1.49
PTPN7-204	ENST00000462815		F8WEM9	126 aa		5.73	□□□□□ -1.49
PTPN7-204	ENST00000462815	TRBV7-4	A0A0J9YYF1	115 aa		5.72	□□□□□ -1.49
PTPN7-204	ENST00000462815		A0A1B0GV72	72 aa		5.72	□□□□□ -1.49
PTPN7-204	ENST00000462815	JMJD7-PLA2G4B	H0Y9G9	81 aa		5.72	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 81 ms