RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 DEFB116Q30KQ4 102 aa9.9□□□□□ -0.82
SSR4-206ENST00000460616 B9D2Q9BPU9 175 aa9.9□□□□□ -0.82
SSR4-206ENST00000460616 WFDC13Q8IUB5 93 aa9.9□□□□□ -0.83
SSR4-206ENST00000460616 H3BNG1 76 aa9.89□□□□□ -0.83
SSR4-206ENST00000460616 UBE2BP63146 152 aa9.88□□□□□ -0.83
SSR4-206ENST00000460616 LINC00208Q96KT6 92 aa9.88□□□□□ -0.83
SSR4-206ENST00000460616 TLX1NBP0CAT3 122 aa9.88□□□□□ -0.83
SSR4-206ENST00000460616 Q5VV11 94 aa9.88□□□□□ -0.83
SSR4-206ENST00000460616 LINC00476Q8WZB0 136 aa9.88□□□□□ -0.83
SSR4-206ENST00000460616 PRKDCP78527 4128 aaKnown RBP9.88□□□□□ -0.83
SSR4-206ENST00000460616 COL7A1Q02388 2944 aa9.87□□□□□ -0.83
SSR4-206ENST00000460616 A0A0G2JQZ4 141 aa9.87□□□□□ -0.83
SSR4-206ENST00000460616 A0A1W2PNN7 141 aa9.87□□□□□ -0.83
SSR4-206ENST00000460616 A8MU10 97 aa9.86□□□□□ -0.83
SSR4-206ENST00000460616 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
SSR4-206ENST00000460616 HUWE1Q7Z6Z7 4374 aaKnown RBP9.85□□□□□ -0.83
SSR4-206ENST00000460616 LINC01556Q5JQF7 62 aa9.84□□□□□ -0.83
SSR4-206ENST00000460616 DNAH9Q9NYC9 4486 aa9.83□□□□□ -0.84
SSR4-206ENST00000460616 IGFL1Q6UW32 110 aa9.83□□□□□ -0.84
SSR4-206ENST00000460616 KRTAP7-1Q8IUC3 87 aa9.83□□□□□ -0.84
SSR4-206ENST00000460616 CHKB-CPT1BH3BT56 60 aa9.82□□□□□ -0.84
SSR4-206ENST00000460616 MRPL55Q7Z7F7 128 aaKnown RBP9.82□□□□□ -0.84
SSR4-206ENST00000460616 Q8N9P0 234 aaPredicted RBP9.82□□□□□ -0.84
SSR4-206ENST00000460616 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
SSR4-206ENST00000460616 LIMD2Q9BT23 127 aa9.82□□□□□ -0.84
SSR4-206ENST00000460616 A0A087WSZ3 146 aa9.8□□□□□ -0.84
SSR4-206ENST00000460616 UBE2AP49459 152 aa9.8□□□□□ -0.84
SSR4-206ENST00000460616 RPL37AP61513 92 aaKnown RBP9.8□□□□□ -0.84
SSR4-206ENST00000460616 H0Y9P7 68 aa9.8□□□□□ -0.84
SSR4-206ENST00000460616 KRTAP29-1A8MX34 341 aaPredicted RBP9.79□□□□□ -0.84
SSR4-206ENST00000460616 CD164Q04900 197 aa9.79□□□□□ -0.84
SSR4-206ENST00000460616 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
SSR4-206ENST00000460616 H3BPC8 53 aa9.78□□□□□ -0.84
SSR4-206ENST00000460616 PRR15LQ9BU68 103 aa9.78□□□□□ -0.84
SSR4-206ENST00000460616 FBN3Q75N90 2809 aa9.76□□□□□ -0.85
SSR4-206ENST00000460616 C16orf90A8MZG2 172 aa9.76□□□□□ -0.85
SSR4-206ENST00000460616 CASC2Q6XLA1 102 aa9.76□□□□□ -0.85
SSR4-206ENST00000460616 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
SSR4-206ENST00000460616 LINC00588Q9Y4M8 146 aa9.74□□□□□ -0.85
SSR4-206ENST00000460616 CASC10Q5T4H9 136 aa9.73□□□□□ -0.85
SSR4-206ENST00000460616 SPTSSBQ8NFR3 76 aa9.73□□□□□ -0.85
SSR4-206ENST00000460616 IGLV8-61A0A075B6I0 122 aa9.72□□□□□ -0.85
SSR4-206ENST00000460616 DNAH10OSP0CZ25 163 aa9.72□□□□□ -0.85
SSR4-206ENST00000460616 C9orf163Q8N9P6 203 aa9.71□□□□□ -0.85
SSR4-206ENST00000460616 DEFB131BA0A096LNP1 70 aa9.71□□□□□ -0.86
SSR4-206ENST00000460616 CNBPP62633 177 aaKnown RBP9.71□□□□□ -0.86
SSR4-206ENST00000460616 KTN1-AS1Q86SY8 53 aa9.7□□□□□ -0.86
SSR4-206ENST00000460616 PRLHP81277 87 aa9.69□□□□□ -0.86
SSR4-206ENST00000460616 ATP11AUNQ6ZP68 121 aa9.69□□□□□ -0.86
SSR4-206ENST00000460616 LCA10Q71F78 164 aa9.69□□□□□ -0.86
SSR4-206ENST00000460616 Q75L30 129 aa9.68□□□□□ -0.86
SSR4-206ENST00000460616 A6NED7 52 aa9.68□□□□□ -0.86
SSR4-206ENST00000460616 TGP01266 2768 aa9.68□□□□□ -0.86
SSR4-206ENST00000460616 A8MWP4 228 aa9.67□□□□□ -0.86
SSR4-206ENST00000460616 COA5Q86WW8 74 aa9.67□□□□□ -0.86
SSR4-206ENST00000460616 LOC101927531A0A1B0GV80 90 aa9.66□□□□□ -0.86
SSR4-206ENST00000460616 C11orf45Q8TAV5 145 aa9.65□□□□□ -0.86
SSR4-206ENST00000460616 IGLV7-46A0A075B6I9 117 aa9.64□□□□□ -0.87
SSR4-206ENST00000460616 LINC00472Q9H8W2 130 aa9.64□□□□□ -0.87
SSR4-206ENST00000460616 CSMD3Q7Z407 3707 aa9.62□□□□□ -0.87
SSR4-206ENST00000460616 RBM12B-AS1Q9P1G2 102 aa9.61□□□□□ -0.87
SSR4-206ENST00000460616 H0Y9J4 135 aa9.6□□□□□ -0.87
SSR4-206ENST00000460616 NDUFS5O43920 106 aa9.6□□□□□ -0.87
SSR4-206ENST00000460616 A6NN06 94 aa9.59□□□□□ -0.87
SSR4-206ENST00000460616 CDC42SE1Q9NRR8 79 aa9.59□□□□□ -0.87
SSR4-206ENST00000460616 IGKV2-24A0A0C4DH68 120 aa9.58□□□□□ -0.88
SSR4-206ENST00000460616 PHF5AQ7RTV0 110 aaKnown RBP9.58□□□□□ -0.88
SSR4-206ENST00000460616 DNAH7Q8WXX0 4024 aa9.57□□□□□ -0.88
SSR4-206ENST00000460616 PCOTHQ58A44 107 aa9.57□□□□□ -0.88
SSR4-206ENST00000460616 MMP24-AS1A0A0U1RRL7 71 aa9.57□□□□□ -0.88
SSR4-206ENST00000460616 A0A096LNI7 61 aa9.56□□□□□ -0.88
SSR4-206ENST00000460616 SPAG11AQ6PDA7 123 aa9.56□□□□□ -0.88
SSR4-206ENST00000460616 LINC01558Q9Y6Z2 57 aa9.54□□□□□ -0.88
SSR4-206ENST00000460616 STARD9Q9P2P6 4700 aa9.54□□□□□ -0.88
SSR4-206ENST00000460616 SPRR1BP22528 89 aa9.54□□□□□ -0.88
SSR4-206ENST00000460616 LYSTQ99698 3801 aa9.53□□□□□ -0.88
SSR4-206ENST00000460616 SRRM2Q9UQ35 2752 aaKnown RBP9.53□□□□□ -0.88
SSR4-206ENST00000460616 TP53AIP1Q9HCN2 124 aa9.5□□□□□ -0.89
SSR4-206ENST00000460616 PLAC8Q9NZF1 115 aa9.5□□□□□ -0.89
SSR4-206ENST00000460616 DNAH1Q9P2D7 4330 aa9.5□□□□□ -0.89
SSR4-206ENST00000460616 MOBPQ13875 183 aa9.49□□□□□ -0.89
SSR4-206ENST00000460616 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
SSR4-206ENST00000460616 DYNC2H1Q8NCM8 4307 aaKnown RBP9.48□□□□□ -0.89
SSR4-206ENST00000460616 KRTAP11-1Q8IUC1 163 aa9.48□□□□□ -0.89
SSR4-206ENST00000460616 PLECQ15149 4684 aaKnown RBP9.48□□□□□ -0.89
SSR4-206ENST00000460616 C7orf65Q6ZTY9 151 aa9.47□□□□□ -0.89
SSR4-206ENST00000460616 ASB16-AS1Q495Z4 193 aa9.45□□□□□ -0.9
SSR4-206ENST00000460616 Q6ZR54 194 aa9.45□□□□□ -0.9
SSR4-206ENST00000460616 SPINK7P58062 85 aa9.45□□□□□ -0.9
SSR4-206ENST00000460616 HRES1P13985 223 aa9.44□□□□□ -0.9
SSR4-206ENST00000460616 APLNQ9ULZ1 77 aa9.42□□□□□ -0.9
SSR4-206ENST00000460616 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
SSR4-206ENST00000460616 Q96NJ1 140 aa9.41□□□□□ -0.9
SSR4-206ENST00000460616 C8orf17Q9NRJ1 99 aa9.41□□□□□ -0.9
SSR4-206ENST00000460616 NUPR2A6NF83 97 aa9.41□□□□□ -0.9
SSR4-206ENST00000460616 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
SSR4-206ENST00000460616 IGHV6-1A0A0B4J1U7 121 aa9.37□□□□□ -0.91
SSR4-206ENST00000460616 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
SSR4-206ENST00000460616 KRTAP1-5Q9BYS1 174 aa9.34□□□□□ -0.91
SSR4-206ENST00000460616 A0A1B0GVX0 72 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms