RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 CLPSL2Q6UWE3 100 aa1.02□□□□□ -2.25
LINC02540-201ENST00000455554 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
LINC02540-201ENST00000455554 RP1L1Q8IWN7 2480 aaPredicted RBP1.02□□□□□ -2.25
LINC02540-201ENST00000455554 CRIPTQ9P021 101 aa1.02□□□□□ -2.25
LINC02540-201ENST00000455554 A0A0G2JQZ4 141 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 G3V318 75 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 H0YAA0 97 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 HTN1P15515 57 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 DEFB131AP59861 70 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 DEFB133Q30KQ1 61 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 Q6ZRX8 168 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 USMG5Q96IX5 58 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 PSORS1C2Q9UIG4 136 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 CEP350Q5VT06 3117 aa1.01□□□□□ -2.25
LINC02540-201ENST00000455554 ROS1P08922 2347 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 CHD7Q9P2D1 2997 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 FBN3Q75N90 2809 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 H3BUA1 57 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 DEFB109BQ30KR1 87 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 Q6ZSA8 131 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 C4orf3Q8WVX3 66 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 NBEAQ8NFP9 2946 aa1□□□□□ -2.25
LINC02540-201ENST00000455554 MAP1BP46821 2468 aaKnown RBP0.99□□□□□ -2.25
LINC02540-201ENST00000455554 RIF1Q5UIP0 2472 aaKnown RBP0.99□□□□□ -2.25
LINC02540-201ENST00000455554 GOLGB1Q14789 3259 aaKnown RBP0.99□□□□□ -2.25
LINC02540-201ENST00000455554 CENPFP49454 3210 aa0.99□□□□□ -2.25
LINC02540-201ENST00000455554 SPRR1AP35321 89 aa0.99□□□□□ -2.25
LINC02540-201ENST00000455554 MRPL34Q9BQ48 92 aaKnown RBP0.99□□□□□ -2.25
LINC02540-201ENST00000455554 PRO2289Q9P1D8 64 aa0.99□□□□□ -2.25
LINC02540-201ENST00000455554 PIEZO2Q9H5I5 2752 aa0.99□□□□□ -2.25
LINC02540-201ENST00000455554 CREBBPQ92793 2442 aa0.98□□□□□ -2.25
LINC02540-201ENST00000455554 BRD3OSQ6XYD6 125 aa0.98□□□□□ -2.25
LINC02540-201ENST00000455554 EP300Q09472 2414 aaPredicted RBP0.98□□□□□ -2.25
LINC02540-201ENST00000455554 TNRC18O15417 2968 aaPredicted RBP0.98□□□□□ -2.25
LINC02540-201ENST00000455554 NBASA2RRP1 2371 aa0.98□□□□□ -2.25
LINC02540-201ENST00000455554 CACNA1HO95180 2353 aa0.98□□□□□ -2.25
LINC02540-201ENST00000455554 SPTBN4Q9H254 2564 aa0.98□□□□□ -2.25
LINC02540-201ENST00000455554 CSPG4Q6UVK1 2322 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 PCNTO95613 3336 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 K7EIL1 84 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 DEFB130BP0DP73 79 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 DEFB130AP0DP74 79 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 H1FX-AS1Q4G0G2 97 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 C10orf95Q9H7T3 257 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 NOP10Q9NPE3 64 aaKnown RBP0.97□□□□□ -2.25
LINC02540-201ENST00000455554 SPG11Q96JI7 2443 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 FN1P02751 2386 aaKnown RBP0.97□□□□□ -2.25
LINC02540-201ENST00000455554 PRUNE2Q8WUY3 3088 aa0.97□□□□□ -2.25
LINC02540-201ENST00000455554 NAV2Q8IVL1 2488 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 ITPR1Q14643 2758 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 LYNX1P0DP58 116 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 SPRR1BP22528 89 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 COX6B2Q6YFQ2 88 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 SPACA4Q8TDM5 124 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 PLAC4Q8WY50 150 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 ZNF462Q96JM2 2506 aa0.96□□□□□ -2.26
LINC02540-201ENST00000455554 DSPP15924 2871 aaKnown RBP0.95□□□□□ -2.26
LINC02540-201ENST00000455554 VPS13AQ96RL7 3174 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 DEFB103AP81534 67 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 DEFB136Q30KP8 78 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 LELP1Q5T871 98 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 DEFB119Q8N690 84 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 U3KQA8 63 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 UTRNP46939 3433 aa0.95□□□□□ -2.26
LINC02540-201ENST00000455554 F8P00451 2351 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 ZZEF1O43149 2961 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 UBR5O95071 2799 aaPredicted RBP0.94□□□□□ -2.26
LINC02540-201ENST00000455554 CHD6Q8TD26 2715 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 H3BUX3 64 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 RPL37P61927 97 aaKnown RBP0.94□□□□□ -2.26
LINC02540-201ENST00000455554 Q6ZRN7 208 aaPredicted RBP0.94□□□□□ -2.26
LINC02540-201ENST00000455554 ASH1LQ9NR48 2969 aaKnown RBP0.94□□□□□ -2.26
LINC02540-201ENST00000455554 CFAP54Q96N23 3096 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 FAM208BQ5VWN6 2430 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 FRYLO94915 3013 aa0.94□□□□□ -2.26
LINC02540-201ENST00000455554 RANBP2P49792 3224 aaKnown RBP0.93□□□□□ -2.26
LINC02540-201ENST00000455554 REV3LO60673 3130 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 INE1O15225 51 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 PRLHP81277 87 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 PRO0255Q9UI72 69 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 CELSR2Q9HCU4 2923 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 TENM2Q9NT68 2774 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 SPTAN1Q13813 2472 aaKnown RBP0.93□□□□□ -2.26
LINC02540-201ENST00000455554 FRYQ5TBA9 3013 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 HTTP42858 3142 aa0.93□□□□□ -2.26
LINC02540-201ENST00000455554 SONP18583 2426 aaKnown RBP0.93□□□□□ -2.26
LINC02540-201ENST00000455554 TTC28Q96AY4 2481 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 CFAP47Q6ZTR5 3102 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 MUC6Q6W4X9 2439 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 ABCA2Q9BZC7 2435 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 A0A096LPF7 62 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 SPINK1P00995 79 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 JMJD1CQ15652 2540 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 XIRP2A4UGR9 3374 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 KALRNO60229 2985 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 CEP290O15078 2479 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 MAP1AP78559 2803 aaPredicted RBP0.92□□□□□ -2.26
LINC02540-201ENST00000455554 SZT2Q5T011 3432 aa0.92□□□□□ -2.26
LINC02540-201ENST00000455554 HIVEP3Q5T1R4 2406 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms