RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 Q6JHZ5 121 aa8.44□□□□□ -1.06
UBE2D4-209ENST00000454428 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
UBE2D4-209ENST00000454428 APOC3P02656 99 aa8.43□□□□□ -1.06
UBE2D4-209ENST00000454428 HRES1P13985 223 aa8.42□□□□□ -1.06
UBE2D4-209ENST00000454428 NHP2Q9NX24 153 aaKnown RBP8.42□□□□□ -1.06
UBE2D4-209ENST00000454428 A6NDN8 102 aa8.41□□□□□ -1.06
UBE2D4-209ENST00000454428 LST1O00453 97 aa8.41□□□□□ -1.06
UBE2D4-209ENST00000454428 TRGC2P03986 189 aa8.41□□□□□ -1.06
UBE2D4-209ENST00000454428 SNAPINO95295 136 aa8.4□□□□□ -1.06
UBE2D4-209ENST00000454428 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.06
UBE2D4-209ENST00000454428 OCIAD2Q56VL3 154 aa8.38□□□□□ -1.07
UBE2D4-209ENST00000454428 SVBPQ8N300 66 aa8.37□□□□□ -1.07
UBE2D4-209ENST00000454428 TRAV13-2A0A0B4J235 113 aa8.36□□□□□ -1.07
UBE2D4-209ENST00000454428 Q6ZQY7 126 aa8.36□□□□□ -1.07
UBE2D4-209ENST00000454428 LINC00575Q6W349 94 aa8.35□□□□□ -1.07
UBE2D4-209ENST00000454428 SLC7A5P1Q8MH63 180 aa8.35□□□□□ -1.07
UBE2D4-209ENST00000454428 SYS1-DBNDD2H3BUS1 97 aa8.34□□□□□ -1.07
UBE2D4-209ENST00000454428 RBM12B-AS1Q9P1G2 102 aa8.34□□□□□ -1.07
UBE2D4-209ENST00000454428 DSCR10P59022 87 aa8.33□□□□□ -1.08
UBE2D4-209ENST00000454428 NOTCH2NLQ7Z3S9 236 aa8.33□□□□□ -1.08
UBE2D4-209ENST00000454428 LINC01545Q5VT33 79 aa8.32□□□□□ -1.08
UBE2D4-209ENST00000454428 MUSTN1Q8IVN3 82 aa8.32□□□□□ -1.08
UBE2D4-209ENST00000454428 IFITM1P13164 125 aa8.31□□□□□ -1.08
UBE2D4-209ENST00000454428 H3BUT2 72 aa8.3□□□□□ -1.08
UBE2D4-209ENST00000454428 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
UBE2D4-209ENST00000454428 NDUFA5Q16718 116 aa8.28□□□□□ -1.08
UBE2D4-209ENST00000454428 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
UBE2D4-209ENST00000454428 COPS9Q8WXC6 57 aa8.28□□□□□ -1.08
UBE2D4-209ENST00000454428 SS18L2Q9UHA2 77 aa8.26□□□□□ -1.09
UBE2D4-209ENST00000454428 Q6ZVH6 145 aa8.25□□□□□ -1.09
UBE2D4-209ENST00000454428 VAMP3Q15836 100 aa8.24□□□□□ -1.09
UBE2D4-209ENST00000454428 KRTAP20-1Q3LI63 56 aa8.24□□□□□ -1.09
UBE2D4-209ENST00000454428 ANKRD39Q53RE8 183 aa8.23□□□□□ -1.09
UBE2D4-209ENST00000454428 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
UBE2D4-209ENST00000454428 Q8N9P0 234 aaPredicted RBP8.23□□□□□ -1.09
UBE2D4-209ENST00000454428 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.22□□□□□ -1.09
UBE2D4-209ENST00000454428 PPDPFLQ8WWR9 84 aa8.21□□□□□ -1.1
UBE2D4-209ENST00000454428 A0A087WSZ3 146 aa8.2□□□□□ -1.1
UBE2D4-209ENST00000454428 SNHG12Q9BXW3 62 aa8.2□□□□□ -1.1
UBE2D4-209ENST00000454428 SCGB1D1O95968 90 aa8.18□□□□□ -1.1
UBE2D4-209ENST00000454428 LINC00313P59037 77 aa8.18□□□□□ -1.1
UBE2D4-209ENST00000454428 TEN1Q86WV5 123 aa8.18□□□□□ -1.1
UBE2D4-209ENST00000454428 COLCA2A8K830 154 aa8.17□□□□□ -1.1
UBE2D4-209ENST00000454428 A8MWP4 228 aa8.17□□□□□ -1.1
UBE2D4-209ENST00000454428 C3orf79P0CE67 100 aa8.16□□□□□ -1.1
UBE2D4-209ENST00000454428 SIGMAR1Q99720 223 aa8.15□□□□□ -1.1
UBE2D4-209ENST00000454428 MDN1Q9NU22 5596 aa8.13□□□□□ -1.11
UBE2D4-209ENST00000454428 MTURNQ8N3F0 131 aa8.13□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST2H2BEQ16778 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BHQ93079 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BNQ99877 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 HIST1H2BMQ99879 126 aa8.09□□□□□ -1.11
UBE2D4-209ENST00000454428 ATOH7Q8N100 152 aa8.08□□□□□ -1.12
UBE2D4-209ENST00000454428 KMT2DO14686 5537 aa8.07□□□□□ -1.12
UBE2D4-209ENST00000454428 IGKV4-1P06312 121 aa8.07□□□□□ -1.12
UBE2D4-209ENST00000454428 NDUFV3P56181 108 aaKnown RBP8.07□□□□□ -1.12
UBE2D4-209ENST00000454428 A0A1W2PNM2 257 aa8.06□□□□□ -1.12
UBE2D4-209ENST00000454428 KRTDAPP60985 99 aa8.06□□□□□ -1.12
UBE2D4-209ENST00000454428 BVES-AS1Q5T3Y7 98 aa8.05□□□□□ -1.12
UBE2D4-209ENST00000454428 SPINK7P58062 85 aa8.04□□□□□ -1.12
UBE2D4-209ENST00000454428 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
UBE2D4-209ENST00000454428 H3BMG7 143 aa8□□□□□ -1.13
UBE2D4-209ENST00000454428 C12orf57Q99622 126 aa8□□□□□ -1.13
UBE2D4-209ENST00000454428 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
UBE2D4-209ENST00000454428 KRTAP5-9P26371 169 aa7.99□□□□□ -1.13
UBE2D4-209ENST00000454428 ZCCHC13Q8WW36 166 aaKnown RBP7.99□□□□□ -1.13
UBE2D4-209ENST00000454428 FAM218AQ96MZ4 157 aa7.99□□□□□ -1.13
UBE2D4-209ENST00000454428 LINC00472Q9H8W2 130 aa7.99□□□□□ -1.13
UBE2D4-209ENST00000454428 WFDC13Q8IUB5 93 aa7.96□□□□□ -1.14
UBE2D4-209ENST00000454428 A6NN06 94 aa7.95□□□□□ -1.14
UBE2D4-209ENST00000454428 TRBV7-4A0A0J9YYF1 115 aa7.92□□□□□ -1.14
UBE2D4-209ENST00000454428 COA6Q5JTJ3 125 aaKnown RBP7.92□□□□□ -1.14
UBE2D4-209ENST00000454428 MT1BP07438 61 aa7.9□□□□□ -1.14
UBE2D4-209ENST00000454428 A0A1B0GVX0 72 aa7.88□□□□□ -1.15
UBE2D4-209ENST00000454428 C8orf87E5RJ46 101 aa7.88□□□□□ -1.15
UBE2D4-209ENST00000454428 FABP2P12104 132 aa7.88□□□□□ -1.15
UBE2D4-209ENST00000454428 SNRPEP62304 92 aaKnown RBP7.88□□□□□ -1.15
UBE2D4-209ENST00000454428 RAB37Q96AX2 223 aa7.88□□□□□ -1.15
UBE2D4-209ENST00000454428 H0YGX0 51 aa7.86□□□□□ -1.15
UBE2D4-209ENST00000454428 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
UBE2D4-209ENST00000454428 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
UBE2D4-209ENST00000454428 SNCGO76070 127 aa7.85□□□□□ -1.15
UBE2D4-209ENST00000454428 ANKRD29Q8N6D5 301 aa7.85□□□□□ -1.15
UBE2D4-209ENST00000454428 A0A1B0GV72 72 aa7.82□□□□□ -1.16
UBE2D4-209ENST00000454428 GHRHP01286 108 aa7.82□□□□□ -1.16
UBE2D4-209ENST00000454428 HIST1H4GQ99525 98 aa7.82□□□□□ -1.16
UBE2D4-209ENST00000454428 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
UBE2D4-209ENST00000454428 H1FX-AS1Q4G0G2 97 aa7.81□□□□□ -1.16
UBE2D4-209ENST00000454428 A0A1B0GX51 115 aa7.79□□□□□ -1.16
UBE2D4-209ENST00000454428 CCKP06307 115 aa7.78□□□□□ -1.16
UBE2D4-209ENST00000454428 TRACP01848 142 aa7.77□□□□□ -1.17
UBE2D4-209ENST00000454428 KRTAP19-8Q3LI54 63 aa7.75□□□□□ -1.17
UBE2D4-209ENST00000454428 Q5VV11 94 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms