RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 SVBPQ8N300 66 aa7.46□□□□□ -1.22
MRPL40-202ENST00000443660 IGFL1Q6UW32 110 aa7.45□□□□□ -1.22
MRPL40-202ENST00000443660 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
MRPL40-202ENST00000443660 CLEC2BQ92478 149 aa7.45□□□□□ -1.22
MRPL40-202ENST00000443660 YPEL4Q96NS1 127 aa7.45□□□□□ -1.22
MRPL40-202ENST00000443660 LST1O00453 97 aa7.44□□□□□ -1.22
MRPL40-202ENST00000443660 LINC00310P59036 64 aa7.44□□□□□ -1.22
MRPL40-202ENST00000443660 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
MRPL40-202ENST00000443660 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
MRPL40-202ENST00000443660 SLC7A5P1Q8MH63 180 aa7.43□□□□□ -1.22
MRPL40-202ENST00000443660 A8MUU9 505 aa7.42□□□□□ -1.22
MRPL40-202ENST00000443660 TRGC2P03986 189 aa7.42□□□□□ -1.22
MRPL40-202ENST00000443660 OCIAD2Q56VL3 154 aa7.41□□□□□ -1.22
MRPL40-202ENST00000443660 VAMP3Q15836 100 aa7.4□□□□□ -1.22
MRPL40-202ENST00000443660 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
MRPL40-202ENST00000443660 RBM12B-AS1Q9P1G2 102 aa7.4□□□□□ -1.22
MRPL40-202ENST00000443660 IFITM1P13164 125 aa7.39□□□□□ -1.23
MRPL40-202ENST00000443660 KRTAP6-3Q3LI67 103 aa7.39□□□□□ -1.23
MRPL40-202ENST00000443660 SCGB1D4Q6XE38 83 aa7.39□□□□□ -1.23
MRPL40-202ENST00000443660 SMIM11BQ8TCY0 68 aa7.38□□□□□ -1.23
MRPL40-202ENST00000443660 TTTY13Q9BZ97 58 aa7.38□□□□□ -1.23
MRPL40-202ENST00000443660 SYS1-DBNDD2H3BUS1 97 aa7.37□□□□□ -1.23
MRPL40-202ENST00000443660 Q6ZQY7 126 aa7.36□□□□□ -1.23
MRPL40-202ENST00000443660 LINC00575Q6W349 94 aa7.35□□□□□ -1.23
MRPL40-202ENST00000443660 Q6ZVH6 145 aa7.35□□□□□ -1.23
MRPL40-202ENST00000443660 SS18L2Q9UHA2 77 aa7.35□□□□□ -1.23
MRPL40-202ENST00000443660 hADV29S1A0JD25 119 aa7.34□□□□□ -1.23
MRPL40-202ENST00000443660 MUSTN1Q8IVN3 82 aa7.34□□□□□ -1.23
MRPL40-202ENST00000443660 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
MRPL40-202ENST00000443660 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
MRPL40-202ENST00000443660 SCGB1D1O95968 90 aa7.31□□□□□ -1.24
MRPL40-202ENST00000443660 LOC100996750A0A140TA64 210 aa7.3□□□□□ -1.24
MRPL40-202ENST00000443660 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
MRPL40-202ENST00000443660 MPLKIPQ8TAP9 179 aa7.3□□□□□ -1.24
MRPL40-202ENST00000443660 KRTAP4-6Q9BYQ5 205 aa7.3□□□□□ -1.24
MRPL40-202ENST00000443660 KRTAP16-1A8MUX0 517 aa7.29□□□□□ -1.24
MRPL40-202ENST00000443660 DSCR10P59022 87 aa7.29□□□□□ -1.24
MRPL40-202ENST00000443660 HRES1P13985 223 aa7.28□□□□□ -1.24
MRPL40-202ENST00000443660 PPDPFLQ8WWR9 84 aa7.28□□□□□ -1.24
MRPL40-202ENST00000443660 H3BUT2 72 aa7.27□□□□□ -1.25
MRPL40-202ENST00000443660 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.27□□□□□ -1.25
MRPL40-202ENST00000443660 MTURNQ8N3F0 131 aa7.27□□□□□ -1.25
MRPL40-202ENST00000443660 ANKRD39Q53RE8 183 aa7.26□□□□□ -1.25
MRPL40-202ENST00000443660 LINC00313P59037 77 aa7.24□□□□□ -1.25
MRPL40-202ENST00000443660 TEN1Q86WV5 123 aa7.24□□□□□ -1.25
MRPL40-202ENST00000443660 NOTCH2NLQ7Z3S9 236 aa7.22□□□□□ -1.25
MRPL40-202ENST00000443660 A0A087WSZ3 146 aa7.21□□□□□ -1.26
MRPL40-202ENST00000443660 SIGMAR1Q99720 223 aa7.2□□□□□ -1.26
MRPL40-202ENST00000443660 C3orf79P0CE67 100 aa7.19□□□□□ -1.26
MRPL40-202ENST00000443660 COLCA2A8K830 154 aa7.18□□□□□ -1.26
MRPL40-202ENST00000443660 C12orf57Q99622 126 aa7.18□□□□□ -1.26
MRPL40-202ENST00000443660 NEBP20929 6669 aa7.18□□□□□ -1.26
MRPL40-202ENST00000443660 A8MWP4 228 aa7.17□□□□□ -1.26
MRPL40-202ENST00000443660 KRTDAPP60985 99 aa7.17□□□□□ -1.26
MRPL40-202ENST00000443660 BVES-AS1Q5T3Y7 98 aa7.17□□□□□ -1.26
MRPL40-202ENST00000443660 SNCGO76070 127 aa7.14□□□□□ -1.27
MRPL40-202ENST00000443660 NDUFV3P56181 108 aaKnown RBP7.14□□□□□ -1.27
MRPL40-202ENST00000443660 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
MRPL40-202ENST00000443660 Q8N9P0 234 aaPredicted RBP7.13□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BKO60814 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BJP06899 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BOP23527 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BBP33778 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BDP58876 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BCP62807 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST2H2BEQ16778 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.12□□□□□ -1.27
MRPL40-202ENST00000443660 ATOH7Q8N100 152 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BHQ93079 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BNQ99877 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 HIST1H2BMQ99879 126 aa7.12□□□□□ -1.27
MRPL40-202ENST00000443660 H3BMG7 143 aa7.1□□□□□ -1.27
MRPL40-202ENST00000443660 KRTAP20-1Q3LI63 56 aa7.08□□□□□ -1.28
MRPL40-202ENST00000443660 SPINK7P58062 85 aa7.07□□□□□ -1.28
MRPL40-202ENST00000443660 SNRPEP62304 92 aaKnown RBP7.07□□□□□ -1.28
MRPL40-202ENST00000443660 IGHV6-1A0A0B4J1U7 121 aa7.06□□□□□ -1.28
MRPL40-202ENST00000443660 A0A1W2PNM2 257 aa7.04□□□□□ -1.28
MRPL40-202ENST00000443660 DEFB116Q30KQ4 102 aa7.04□□□□□ -1.28
MRPL40-202ENST00000443660 H0YGX0 51 aa7.03□□□□□ -1.28
MRPL40-202ENST00000443660 FABP2P12104 132 aa7.03□□□□□ -1.28
MRPL40-202ENST00000443660 ZCCHC13Q8WW36 166 aaKnown RBP7.02□□□□□ -1.29
MRPL40-202ENST00000443660 H3BS24 57 aa7.01□□□□□ -1.29
MRPL40-202ENST00000443660 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
MRPL40-202ENST00000443660 MUC12Q9UKN1 5478 aa7□□□□□ -1.29
MRPL40-202ENST00000443660 C8orf87E5RJ46 101 aa6.99□□□□□ -1.29
MRPL40-202ENST00000443660 ANKRD29Q8N6D5 301 aa6.99□□□□□ -1.29
MRPL40-202ENST00000443660 COA6Q5JTJ3 125 aaKnown RBP6.98□□□□□ -1.29
MRPL40-202ENST00000443660 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
MRPL40-202ENST00000443660 LINC00472Q9H8W2 130 aa6.98□□□□□ -1.29
MRPL40-202ENST00000443660 HSBP1L1C9JCN9 74 aa6.97□□□□□ -1.29
MRPL40-202ENST00000443660 WFDC13Q8IUB5 93 aa6.97□□□□□ -1.29
MRPL40-202ENST00000443660 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
MRPL40-202ENST00000443660 RAB37Q96AX2 223 aa6.96□□□□□ -1.3
MRPL40-202ENST00000443660 A0A1B0GVX0 72 aa6.94□□□□□ -1.3
MRPL40-202ENST00000443660 A6NN06 94 aa6.94□□□□□ -1.3
MRPL40-202ENST00000443660 A0A1B0GX51 115 aa6.93□□□□□ -1.3
MRPL40-202ENST00000443660 TRACP01848 142 aa6.92□□□□□ -1.3
MRPL40-202ENST00000443660 LYRM7Q5U5X0 104 aa6.91□□□□□ -1.3
MRPL40-202ENST00000443660 CCKP06307 115 aa6.9□□□□□ -1.3
MRPL40-202ENST00000443660 A0A1B0GV72 72 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms