RNA–Protein interactions for RNA: ENST00000440186.5

PTPN12-207, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 1 (best)

Gene PTPN12, Length 159 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-207ENST00000440186 UBE2G1P62253 170 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 RPS29P62273 56 aaKnown RBP0.68□□□□□ -2.3
PTPN12-207ENST00000440186 COX6A2Q02221 97 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 SPANXN1Q5VSR9 72 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 C2orf82Q6UX34 121 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 Q86TA4 180 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 LINC00269Q8N2A0 174 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 NUP35Q8NFH5 326 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 DIRC1Q969H9 104 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 AP1S3Q96PC3 154 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 CDC42SE2Q9NRR3 84 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 MUC2Q02817 5179 aa0.68□□□□□ -2.3
PTPN12-207ENST00000440186 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 A0A087WSZ3 146 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 A0A096LNI7 61 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 TRBV30A0A0K0K1B3 111 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 LINC00959A0A1B0GUT2 108 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 LINC01549A6NIU2 74 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 H3BVH4 76 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 I3L3M4 83 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 SEC11AP67812 179 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 HAMPP81172 84 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 MRPS36P82909 103 aaKnown RBP0.67□□□□□ -2.3
PTPN12-207ENST00000440186 ZNF56Q15929 161 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 FAM74A4Q5TZK3 123 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 SPAG11AQ6PDA7 123 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 BAGE2Q86Y30 109 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 OR10AG1Q8NH19 301 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 PLEKHB2Q96CS7 222 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 CARD19Q96LW7 228 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 C20orf78Q9BR46 151 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 TMEM191AQ9H0A3 160 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 MANBALQ9NQG1 85 aa0.67□□□□□ -2.3
PTPN12-207ENST00000440186 LPAP08519 4548 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 C7orf77A4D0Y5 90 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 MAP1LC3B2A6NCE7 125 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 NDUFA1O15239 70 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 PFDN1O60925 122 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 ERC2-IT1O76042 136 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 DNAL4O96015 105 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 RPL35P42766 123 aaKnown RBP0.66□□□□□ -2.3
PTPN12-207ENST00000440186 ASB16-AS1Q495Z4 193 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 C9orf116Q5BN46 136 aaPredicted RBP0.66□□□□□ -2.3
PTPN12-207ENST00000440186 RPL7L1Q6DKI1 246 aaKnown RBP0.66□□□□□ -2.3
PTPN12-207ENST00000440186 SFTA2Q6UW10 78 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 Q8IZM0 81 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 KCNRGQ8N5I3 272 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 RAB37Q96AX2 223 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 CHCHD1Q96BP2 118 aaKnown RBP0.66□□□□□ -2.3
PTPN12-207ENST00000440186 DPH3Q96FX2 82 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 MAP1LC3BQ9GZQ8 125 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 BATF3Q9NR55 127 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 SPANXA1Q9NS26 97 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 ORMDL1Q9P0S3 153 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 LAMTOR2Q9Y2Q5 125 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 UBE2D4Q9Y2X8 147 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
PTPN12-207ENST00000440186 A0A1B0GUT8 65 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 ZNF727A8MUV8 499 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 BCE1O60756 84 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 HIST1H2BKO60814 126 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 SPINK1P00995 79 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 MT-ND6P03923 174 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 S100A8P05109 93 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 HIST1H2BJP06899 126 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 BCL2P10415 239 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 SPRR1AP35321 89 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 GNG4P50150 75 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 UBE2D1P51668 147 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 COX17Q14061 63 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 Q5BKY6 102 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 Q5XG85 94 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 SSBP3-AS1Q7Z2R9 100 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 AMELXQ99217 191 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 SMIM3Q9BZL3 60 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 ST20Q9HBF5 79 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 C6orf48Q9UBA6 75 aa0.65□□□□□ -2.31
PTPN12-207ENST00000440186 MUC17Q685J3 4493 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.64□□□□□ -2.31
PTPN12-207ENST00000440186 FXYD6-FXYD2A0A087WZ82 144 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 LOC107984156A0A0G2JMH3 177 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 KANTRA0A1W2PQU2 76 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 SMIM27A0A1W2PRY6 76 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 hDV103S1A0JD37 113 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 LINC01546A6NGU7 62 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 IGIPA6NJ69 53 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 HIGD1CA8MV81 97 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 F8VRH5 84 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 ARPC5O15511 151 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 MGPP08493 103 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 PRB4P10163 310 aaPredicted RBP0.64□□□□□ -2.31
PTPN12-207ENST00000440186 IFI27P40305 119 aaPredicted RBP0.64□□□□□ -2.31
PTPN12-207ENST00000440186 HBBP68871 147 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 SPAG11BQ08648 103 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 CLPSL2Q6UWE3 100 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 ALKAL2Q6UX46 152 aa0.64□□□□□ -2.31
PTPN12-207ENST00000440186 PHF5AQ7RTV0 110 aaKnown RBP0.64□□□□□ -2.31
PTPN12-207ENST00000440186 ARL17AQ8IVW1 177 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms