RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 HSPB11Q9Y547 144 aa0.32□□□□□ -2.36
VPS41-207ENST00000439468 A0A087WWC5 75 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 C9JAW5 83 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 BCE1O60756 84 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 CCKP06307 115 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 IGLC1P0CG04 106 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 POLR2JP52435 117 aaKnown RBP0.31□□□□□ -2.36
VPS41-207ENST00000439468 RPS28P62857 69 aaKnown RBP0.31□□□□□ -2.36
VPS41-207ENST00000439468 CFAP126Q5VTH2 177 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 LSM10Q969L4 123 aaKnown RBP0.31□□□□□ -2.36
VPS41-207ENST00000439468 HIGD1AQ9Y241 93 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 R4GMQ9 66 aa0.31□□□□□ -2.36
VPS41-207ENST00000439468 A0A1B0GX51 115 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 MCRIP1C9JLW8 97 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 TRAPPC2P0DI81 140 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 TRAPPC2BP0DI82 140 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 TMEM91Q6ZNR0 172 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 MT1LQ93083 61 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 NPVFQ9HCQ7 196 aa0.3□□□□□ -2.36
VPS41-207ENST00000439468 PNMA8CA0A1B0GUJ8 204 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 TMEM262E9PQX1 116 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 SNRPGP62308 76 aaKnown RBP0.29□□□□□ -2.36
VPS41-207ENST00000439468 UBE2D2P62837 147 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 ATP11AUNQ6ZP68 121 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 LZICQ8WZA0 190 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 MAGOHBQ96A72 148 aaKnown RBP0.29□□□□□ -2.36
VPS41-207ENST00000439468 CGREF1Q99674 301 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 ABRACLQ9P1F3 81 aa0.29□□□□□ -2.36
VPS41-207ENST00000439468 TRBV10-1A0A0K0K1A3 114 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 M0R2P5 195 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 AKR1D1P51857 326 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 PRLHP81277 87 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 KRTAP6-1Q3LI64 71 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 CLLU1Q5K131 121 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 C6orf201Q7Z4U5 140 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 SNX29P2Q8IUI4 249 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 TCTE3Q8IZS6 198 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 SPRR4Q96PI1 79 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 CMC2Q9NRP2 79 aa0.28□□□□□ -2.36
VPS41-207ENST00000439468 KLKP1Q107X0 134 aa0.27□□□□□ -2.37
VPS41-207ENST00000439468 TRAV30A0A087WSZ9 112 aa0.26□□□□□ -2.37
VPS41-207ENST00000439468 SELENOWP63302 87 aa0.26□□□□□ -2.37
VPS41-207ENST00000439468 ARHGAP5-AS1Q96IT6 56 aa0.26□□□□□ -2.37
VPS41-207ENST00000439468 TAS2R8Q9NYW2 309 aa0.26□□□□□ -2.37
VPS41-207ENST00000439468 LSM2Q9Y333 95 aaKnown RBP0.26□□□□□ -2.37
VPS41-207ENST00000439468 FAM236AA0A1B0GUQ0 79 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 FAM236BA0A1B0GV22 79 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 CRYM-AS1A6NIL9 109 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 KRTAP19-5Q3LI72 72 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 CCDC153Q494R4 210 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 Q6AWC8 147 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 SSBP3-AS1Q7Z2R9 100 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 AKAP14Q86UN6 197 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 AGPAT4-IT1Q9H0P7 198 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 NAA60Q9H7X0 242 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 C6orf48Q9UBA6 75 aa0.25□□□□□ -2.37
VPS41-207ENST00000439468 TRBV7-3A0A075B6L6 115 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 M0R129 80 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 M0R3E3 92 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 CORTO00230 105 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 IFNGP01579 166 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 MT1AP04731 61 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 PKIAP61925 76 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 DR1Q01658 176 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 RPL13AP3Q6NVV1 102 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 MAFIPQ8WZ33 124 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 TMEM141Q96I45 108 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 AQP10Q96PS8 301 aa0.24□□□□□ -2.37
VPS41-207ENST00000439468 TRBV25-1A0A075B6N4 114 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 ZNF670-ZNF695F2Z2N8 137 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 CFDP00746 253 aaPredicted RBP0.23□□□□□ -2.37
VPS41-207ENST00000439468 NMBP08949 121 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 PYYP10082 97 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 SLC25A6P12236 298 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 PPDPFLQ8WWR9 84 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 DSCR8Q96T75 97 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 S100A13Q99584 98 aa0.23□□□□□ -2.37
VPS41-207ENST00000439468 TRBV6-1A0A0K0K1D8 114 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 H3BQ15 152 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 SNAPC5O75971 98 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 IGLC2P0DOY2 106 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 SNCAP37840 140 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 SPAG11BQ08648 103 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 ZNF818PQ6ZRF7 136 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 CCDC167Q9P0B6 97 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 GNG8Q9UK08 70 aa0.22□□□□□ -2.37
VPS41-207ENST00000439468 TEX49A0A1B0GTD5 131 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 LINC00959A0A1B0GUT2 108 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 SNRPGP15A8MWD9 76 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 ARPC5O15511 151 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 ELOF1P60002 83 aaKnown RBP0.21□□□□□ -2.38
VPS41-207ENST00000439468 FAM74A4Q5TZK3 123 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 IFI27L1Q96BM0 104 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 TSC22D3Q99576 134 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 TRGV9Q99603 122 aa0.21□□□□□ -2.38
VPS41-207ENST00000439468 BORCS7-ASMTA0A0B4J1R7 106 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 TCRBV3S1A0A5B6 114 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 J3QLW9 94 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 NDUFA1O15239 70 aa0.2□□□□□ -2.38
VPS41-207ENST00000439468 S100A10P60903 97 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms