RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 KRTAP2-1Q9BYU5 128 aa4.54□□□□□ -1.68
SMPD4-208ENST00000439029 A0A1B0GWB2 263 aa4.53□□□□□ -1.68
SMPD4-208ENST00000439029 COX19Q49B96 90 aa4.53□□□□□ -1.68
SMPD4-208ENST00000439029 ANKRD39Q53RE8 183 aa4.53□□□□□ -1.68
SMPD4-208ENST00000439029 Q6JHZ5 121 aa4.53□□□□□ -1.68
SMPD4-208ENST00000439029 TRAPPC1Q9Y5R8 145 aa4.53□□□□□ -1.68
SMPD4-208ENST00000439029 TRBV7-6A0A0J9YX20 115 aa4.52□□□□□ -1.69
SMPD4-208ENST00000439029 SPRR2EP22531 72 aa4.52□□□□□ -1.69
SMPD4-208ENST00000439029 SPRR2BP35325 72 aa4.52□□□□□ -1.69
SMPD4-208ENST00000439029 SPRR2AP35326 72 aa4.52□□□□□ -1.69
SMPD4-208ENST00000439029 HERVK_113P61574 105 aa4.52□□□□□ -1.69
SMPD4-208ENST00000439029 SLC7A5P1Q8MH63 180 aa4.52□□□□□ -1.69
SMPD4-208ENST00000439029 LITAFQ99732 161 aa4.51□□□□□ -1.69
SMPD4-208ENST00000439029 SERF1AO75920 110 aa4.5□□□□□ -1.69
SMPD4-208ENST00000439029 OCIAD2Q56VL3 154 aa4.5□□□□□ -1.69
SMPD4-208ENST00000439029 H3BUT2 72 aa4.49□□□□□ -1.69
SMPD4-208ENST00000439029 A6NDN8 102 aa4.48□□□□□ -1.69
SMPD4-208ENST00000439029 MT1BP07438 61 aa4.48□□□□□ -1.69
SMPD4-208ENST00000439029 TRAV13-2A0A0B4J235 113 aa4.47□□□□□ -1.69
SMPD4-208ENST00000439029 DPM2O94777 84 aa4.47□□□□□ -1.69
SMPD4-208ENST00000439029 PLNP26678 52 aa4.47□□□□□ -1.69
SMPD4-208ENST00000439029 SIGMAR1Q99720 223 aa4.47□□□□□ -1.69
SMPD4-208ENST00000439029 NHP2Q9NX24 153 aaKnown RBP4.47□□□□□ -1.69
SMPD4-208ENST00000439029 COLCA2A8K830 154 aa4.46□□□□□ -1.7
SMPD4-208ENST00000439029 LINC00313P59037 77 aa4.46□□□□□ -1.7
SMPD4-208ENST00000439029 KRTAP10-5P60370 271 aa4.46□□□□□ -1.7
SMPD4-208ENST00000439029 CHCHD1Q96BP2 118 aaKnown RBP4.46□□□□□ -1.7
SMPD4-208ENST00000439029 SPRR2FQ96RM1 72 aa4.46□□□□□ -1.7
SMPD4-208ENST00000439029 IGKCP01834 107 aa4.45□□□□□ -1.7
SMPD4-208ENST00000439029 Q6ZQY7 126 aa4.45□□□□□ -1.7
SMPD4-208ENST00000439029 A0A1W2PNM2 257 aa4.44□□□□□ -1.7
SMPD4-208ENST00000439029 A4D1N5 150 aa4.44□□□□□ -1.7
SMPD4-208ENST00000439029 HSBP1O75506 76 aa4.44□□□□□ -1.7
SMPD4-208ENST00000439029 SPINK7P58062 85 aa4.44□□□□□ -1.7
SMPD4-208ENST00000439029 SS18L2Q9UHA2 77 aa4.44□□□□□ -1.7
SMPD4-208ENST00000439029 H3BS24 57 aa4.43□□□□□ -1.7
SMPD4-208ENST00000439029 SMIM11BQ8TCY0 68 aa4.43□□□□□ -1.7
SMPD4-208ENST00000439029 A0A087WSZ3 146 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 ZNF815PA8K554 130 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 E9PLD3 99 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 TIMM17BO60830 172 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 Q5VV11 94 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 WFDC13Q8IUB5 93 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 TTTY13Q9BZ97 58 aa4.42□□□□□ -1.7
SMPD4-208ENST00000439029 TMEM218A2RU14 115 aa4.41□□□□□ -1.7
SMPD4-208ENST00000439029 LEPROTL1O95214 131 aa4.41□□□□□ -1.7
SMPD4-208ENST00000439029 FABP4P15090 132 aa4.41□□□□□ -1.7
SMPD4-208ENST00000439029 LINC00575Q6W349 94 aa4.4□□□□□ -1.71
SMPD4-208ENST00000439029 SNHG12Q9BXW3 62 aa4.4□□□□□ -1.71
SMPD4-208ENST00000439029 HSPB8Q9UJY1 196 aa4.4□□□□□ -1.71
SMPD4-208ENST00000439029 TMA7Q9Y2S6 64 aaKnown RBP4.39□□□□□ -1.71
SMPD4-208ENST00000439029 hADV29S1A0JD25 119 aa4.38□□□□□ -1.71
SMPD4-208ENST00000439029 IGKV4-1P06312 121 aa4.38□□□□□ -1.71
SMPD4-208ENST00000439029 SPRR2DP22532 72 aa4.38□□□□□ -1.71
SMPD4-208ENST00000439029 LCE1AQ5T7P2 110 aa4.37□□□□□ -1.71
SMPD4-208ENST00000439029 FAM218AQ96MZ4 157 aa4.37□□□□□ -1.71
SMPD4-208ENST00000439029 IGHV6-1A0A0B4J1U7 121 aa4.36□□□□□ -1.71
SMPD4-208ENST00000439029 DEFB116Q30KQ4 102 aa4.36□□□□□ -1.71
SMPD4-208ENST00000439029 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
SMPD4-208ENST00000439029 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
SMPD4-208ENST00000439029 LINC00310P59036 64 aa4.35□□□□□ -1.71
SMPD4-208ENST00000439029 VAMP3Q15836 100 aa4.35□□□□□ -1.71
SMPD4-208ENST00000439029 MUSTN1Q8IVN3 82 aa4.35□□□□□ -1.71
SMPD4-208ENST00000439029 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.71
SMPD4-208ENST00000439029 FAM236AA0A1B0GUQ0 79 aa4.32□□□□□ -1.72
SMPD4-208ENST00000439029 FAM236BA0A1B0GV22 79 aa4.32□□□□□ -1.72
SMPD4-208ENST00000439029 SCGB1D1O95968 90 aa4.32□□□□□ -1.72
SMPD4-208ENST00000439029 UQCC3Q6UW78 93 aa4.32□□□□□ -1.72
SMPD4-208ENST00000439029 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.32□□□□□ -1.72
SMPD4-208ENST00000439029 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
SMPD4-208ENST00000439029 IMUPQ9GZP8 106 aa4.32□□□□□ -1.72
SMPD4-208ENST00000439029 H1FX-AS1Q4G0G2 97 aa4.31□□□□□ -1.72
SMPD4-208ENST00000439029 IFITM1P13164 125 aa4.29□□□□□ -1.72
SMPD4-208ENST00000439029 CLLU1Q5K131 121 aa4.29□□□□□ -1.72
SMPD4-208ENST00000439029 LCE3BQ5TA77 95 aa4.29□□□□□ -1.72
SMPD4-208ENST00000439029 PPDPFLQ8WWR9 84 aa4.28□□□□□ -1.72
SMPD4-208ENST00000439029 COPS9Q8WXC6 57 aa4.28□□□□□ -1.72
SMPD4-208ENST00000439029 NDUFV3P56181 108 aaKnown RBP4.27□□□□□ -1.73
SMPD4-208ENST00000439029 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
SMPD4-208ENST00000439029 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
SMPD4-208ENST00000439029 H3BMG7 143 aa4.24□□□□□ -1.73
SMPD4-208ENST00000439029 SYS1-DBNDD2H3BUS1 97 aa4.24□□□□□ -1.73
SMPD4-208ENST00000439029 LYRM7Q5U5X0 104 aa4.24□□□□□ -1.73
SMPD4-208ENST00000439029 YPEL4Q96NS1 127 aa4.24□□□□□ -1.73
SMPD4-208ENST00000439029 LINC00472Q9H8W2 130 aa4.24□□□□□ -1.73
SMPD4-208ENST00000439029 TRGC2P03986 189 aa4.23□□□□□ -1.73
SMPD4-208ENST00000439029 C12orf57Q99622 126 aa4.23□□□□□ -1.73
SMPD4-208ENST00000439029 A0A1B0GV72 72 aa4.22□□□□□ -1.73
SMPD4-208ENST00000439029 A0A1B0GVX0 72 aa4.22□□□□□ -1.73
SMPD4-208ENST00000439029 C8orf87E5RJ46 101 aa4.22□□□□□ -1.73
SMPD4-208ENST00000439029 C3orf79P0CE67 100 aa4.22□□□□□ -1.73
SMPD4-208ENST00000439029 C5orf47Q569G3 176 aa4.22□□□□□ -1.73
SMPD4-208ENST00000439029 APOC3P02656 99 aa4.21□□□□□ -1.74
SMPD4-208ENST00000439029 LINC01545Q5VT33 79 aa4.21□□□□□ -1.74
SMPD4-208ENST00000439029 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
SMPD4-208ENST00000439029 C21orf62-AS1Q17RA5 79 aa4.2□□□□□ -1.74
SMPD4-208ENST00000439029 KRTAP4-9Q9BYQ8 210 aa4.2□□□□□ -1.74
SMPD4-208ENST00000439029 FABP2P12104 132 aa4.19□□□□□ -1.74
SMPD4-208ENST00000439029 RAB37Q96AX2 223 aa4.19□□□□□ -1.74
SMPD4-208ENST00000439029 IGKV3D-7A0A0C4DH55 119 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms