RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 IFNA1P01562 189 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 FCER1GP30273 86 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 Q6ZUT4 128 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 PYDC1Q8WXC3 89 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 SCGB3A1Q96QR1 104 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 C9orf16Q9BUW7 83 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 NPCDR1Q9BY65 106 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 SPRR2GQ9BYE4 73 aa0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 SYNE1Q8NF91 8797 aaKnown RBP0.88□□□□□ -2.27
HMGB3P12-201ENST00000438745 TRAV9-1A0A075B6T8 112 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 C17orf112F2Z3M2 114 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 SDC2P34741 201 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 SULT1A1P50225 295 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 CRIP1P50238 77 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 UBE2G1P62253 170 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 HBBP68871 147 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 S100A12P80511 92 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 C8orf59Q8N0T1 100 aaPredicted RBP0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 RPL39LQ96EH5 51 aaKnown RBP0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 EPDR1Q9UM22 224 aa0.87□□□□□ -2.27
HMGB3P12-201ENST00000438745 CXCL1P09341 107 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 S100A11P31949 105 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 Q5XG85 94 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 KRTAP19-3Q7Z4W3 81 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 STX12Q86Y82 276 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 Q8IZM0 81 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 TMEM229BQ8NBD8 167 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 PRRT1Q99946 306 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 PRO1933Q9H354 126 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 ST20Q9HBF5 79 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 LAMTOR3Q9UHA4 124 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 ZFP30Q9Y2G7 519 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 SNURFQ9Y675 71 aa0.86□□□□□ -2.27
HMGB3P12-201ENST00000438745 FAM25AB3EWG3 89 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 FAM25CB3EWG5 89 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 FAM25GB3EWG6 89 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 H0YAA0 97 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 HMGB3O15347 200 aaKnown RBP0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 Q6ZQT0 140 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 SMIM15Q7Z3B0 74 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 RNASE7Q9H1E1 156 aaKnown RBP0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 SCP2D1Q9UJQ7 156 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 TPRKBQ9Y3C4 175 aa0.85□□□□□ -2.27
HMGB3P12-201ENST00000438745 SFT2D2O95562 160 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 AKAIN1P0CW23 69 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 AKR1D1P51857 326 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 MT1XP80297 61 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 TMEM128Q5BJH2 165 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 TEX261Q6UWH6 196 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 LCA10Q71F78 164 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 TOMM6Q96B49 74 aa0.84□□□□□ -2.27
HMGB3P12-201ENST00000438745 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.28
HMGB3P12-201ENST00000438745 ATP5HO75947 161 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 NDUFA6P56556 154 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 ALKAL2Q6UX46 152 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 WFDC13Q8IUB5 93 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 PRR15Q8IV56 129 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 PLAC4Q8WY50 150 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 C2orf88Q9BSF0 95 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 TMEM191AQ9H0A3 160 aa0.83□□□□□ -2.28
HMGB3P12-201ENST00000438745 F2Z2F3 143 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 NCR3O14931 201 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 PDE6GP18545 87 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 GCHFRP30047 84 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 SPRR1AP35321 89 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 KLKP1Q107X0 134 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 RHEBQ15382 184 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 H1FX-AS1Q4G0G2 97 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 HIST3H2BBQ8N257 126 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 TMEM167BQ9NRX6 74 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 SPANXA1Q9NS26 97 aa0.82□□□□□ -2.28
HMGB3P12-201ENST00000438745 TRBV27A0A0K0K1C4 114 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 A0A1W2PRE2 83 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 S100A6P06703 90 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 IFI27P40305 119 aaPredicted RBP0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 SPINK7P58062 85 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 RPL39P62891 51 aaKnown RBP0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 MRPS36P82909 103 aaKnown RBP0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 SSBP1Q04837 148 aaKnown RBP0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 Q6ZRX8 168 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 COX7B2Q8TF08 81 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 KCNQ1DNQ9H478 68 aa0.81□□□□□ -2.28
HMGB3P12-201ENST00000438745 A0A087WXM4 84 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 TRBV10-3A0A0K0K1G6 114 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 IGLC6P0CF74 106 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 MT1GP13640 62 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 FAUP35544 74 aaKnown RBP0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 RPL35P42766 123 aaKnown RBP0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 CEBPGP53567 150 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 POLR2KP53803 58 aaKnown RBP0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 MRPS10P82664 201 aaKnown RBP0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 LINC00299Q6ZSB3 139 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 BAGE2Q86Y30 109 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 DEFB105AQ8NG35 78 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 OSTCQ9NRP0 149 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 TNFSF18Q9UNG2 199 aa0.8□□□□□ -2.28
HMGB3P12-201ENST00000438745 D6R8Y8 96 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 SPRR1BP22528 89 aa0.79□□□□□ -2.28
HMGB3P12-201ENST00000438745 VBP1P61758 197 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms