RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
DDX56-205ENST00000433257 TENM3Q9P273 2699 aa9.42□□□□□ -0.9
DDX56-205ENST00000433257 K7EQZ3 153 aa9.42□□□□□ -0.9
DDX56-205ENST00000433257 ST20-AS1Q8NBB2 130 aa9.42□□□□□ -0.9
DDX56-205ENST00000433257 LINC00476Q8WZB0 136 aa9.42□□□□□ -0.9
DDX56-205ENST00000433257 PSCAO43653 123 aa9.41□□□□□ -0.9
DDX56-205ENST00000433257 MPLKIPQ8TAP9 179 aa9.41□□□□□ -0.9
DDX56-205ENST00000433257 PKIGQ9Y2B9 76 aa9.41□□□□□ -0.9
DDX56-205ENST00000433257 FAM229BQ4G0N7 80 aa9.4□□□□□ -0.9
DDX56-205ENST00000433257 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.39□□□□□ -0.91
DDX56-205ENST00000433257 STAB2Q8WWQ8 2551 aa9.38□□□□□ -0.91
DDX56-205ENST00000433257 FAM168BA1KXE4 195 aa9.38□□□□□ -0.91
DDX56-205ENST00000433257 LINC00588Q9Y4M8 146 aa9.38□□□□□ -0.91
DDX56-205ENST00000433257 DNAH7Q8WXX0 4024 aa9.36□□□□□ -0.91
DDX56-205ENST00000433257 IGFL1Q6UW32 110 aa9.36□□□□□ -0.91
DDX56-205ENST00000433257 SPANXA2-OT1Q8N9U9 137 aa9.36□□□□□ -0.91
DDX56-205ENST00000433257 C1orf64Q8NEQ6 169 aa9.36□□□□□ -0.91
DDX56-205ENST00000433257 H0Y9J4 135 aa9.36□□□□□ -0.91
DDX56-205ENST00000433257 KRTAP7-1Q8IUC3 87 aa9.36□□□□□ -0.91
DDX56-205ENST00000433257 C16orf90A8MZG2 172 aa9.35□□□□□ -0.91
DDX56-205ENST00000433257 CNBPP62633 177 aaKnown RBP9.33□□□□□ -0.92
DDX56-205ENST00000433257 C14orf177Q52M58 125 aa9.33□□□□□ -0.92
DDX56-205ENST00000433257 TRAV22A0A0B4J277 110 aa9.32□□□□□ -0.92
DDX56-205ENST00000433257 SPRR1BP22528 89 aa9.32□□□□□ -0.92
DDX56-205ENST00000433257 C1orf195Q5TG92 126 aa9.32□□□□□ -0.92
DDX56-205ENST00000433257 PRR15Q8IV56 129 aa9.32□□□□□ -0.92
DDX56-205ENST00000433257 UBE2AP49459 152 aa9.31□□□□□ -0.92
DDX56-205ENST00000433257 NUPR2A6NF83 97 aa9.3□□□□□ -0.92
DDX56-205ENST00000433257 CASC10Q5T4H9 136 aa9.3□□□□□ -0.92
DDX56-205ENST00000433257 A0A087WSZ3 146 aa9.29□□□□□ -0.92
DDX56-205ENST00000433257 KRTAP29-1A8MX34 341 aaPredicted RBP9.29□□□□□ -0.92
DDX56-205ENST00000433257 A8MWP4 228 aa9.27□□□□□ -0.93
DDX56-205ENST00000433257 CASC2Q6XLA1 102 aa9.27□□□□□ -0.93
DDX56-205ENST00000433257 CSMD3Q7Z407 3707 aa9.27□□□□□ -0.93
DDX56-205ENST00000433257 WFDC13Q8IUB5 93 aa9.26□□□□□ -0.93
DDX56-205ENST00000433257 H0Y9P7 68 aa9.24□□□□□ -0.93
DDX56-205ENST00000433257 LINC00208Q96KT6 92 aa9.24□□□□□ -0.93
DDX56-205ENST00000433257 LIMD2Q9BT23 127 aa9.24□□□□□ -0.93
DDX56-205ENST00000433257 A0A096LNI7 61 aa9.23□□□□□ -0.93
DDX56-205ENST00000433257 STARD9Q9P2P6 4700 aa9.23□□□□□ -0.93
DDX56-205ENST00000433257 PRLHP81277 87 aa9.22□□□□□ -0.93
DDX56-205ENST00000433257 RPL37AP61513 92 aaKnown RBP9.2□□□□□ -0.94
DDX56-205ENST00000433257 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
DDX56-205ENST00000433257 TP53AIP1Q9HCN2 124 aa9.2□□□□□ -0.94
DDX56-205ENST00000433257 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
DDX56-205ENST00000433257 A0A1W2PNN7 141 aa9.17□□□□□ -0.94
DDX56-205ENST00000433257 APLNQ9ULZ1 77 aa9.17□□□□□ -0.94
DDX56-205ENST00000433257 IGKV2-24A0A0C4DH68 120 aa9.16□□□□□ -0.94
DDX56-205ENST00000433257 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
DDX56-205ENST00000433257 TENM2Q9NT68 2774 aa9.16□□□□□ -0.94
DDX56-205ENST00000433257 MOBPQ13875 183 aa9.15□□□□□ -0.94
DDX56-205ENST00000433257 DEFB116Q30KQ4 102 aa9.15□□□□□ -0.94
DDX56-205ENST00000433257 C9orf163Q8N9P6 203 aa9.15□□□□□ -0.94
DDX56-205ENST00000433257 LRCOL1A6NCL2 159 aa9.14□□□□□ -0.95
DDX56-205ENST00000433257 LY6G6CO95867 125 aa9.13□□□□□ -0.95
DDX56-205ENST00000433257 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
DDX56-205ENST00000433257 PSPHP1O15172 72 aa9.12□□□□□ -0.95
DDX56-205ENST00000433257 PRR4Q16378 134 aa9.12□□□□□ -0.95
DDX56-205ENST00000433257 LYSTQ99698 3801 aa9.12□□□□□ -0.95
DDX56-205ENST00000433257 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
DDX56-205ENST00000433257 MMP24-AS1A0A0U1RRL7 71 aa9.1□□□□□ -0.95
DDX56-205ENST00000433257 PMAIP1Q13794 54 aa9.1□□□□□ -0.95
DDX56-205ENST00000433257 A0A0G2JQZ4 141 aa9.1□□□□□ -0.95
DDX56-205ENST00000433257 PHF5AQ7RTV0 110 aaKnown RBP9.1□□□□□ -0.95
DDX56-205ENST00000433257 Q8N9P0 234 aaPredicted RBP9.1□□□□□ -0.95
DDX56-205ENST00000433257 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
DDX56-205ENST00000433257 A8MUN3 132 aa9.08□□□□□ -0.96
DDX56-205ENST00000433257 ASB16-AS1Q495Z4 193 aa9.07□□□□□ -0.96
DDX56-205ENST00000433257 Q5VV11 94 aa9.07□□□□□ -0.96
DDX56-205ENST00000433257 KMT2CQ8NEZ4 4911 aaKnown RBP9.07□□□□□ -0.96
DDX56-205ENST00000433257 LOC101927531A0A1B0GV80 90 aa9.05□□□□□ -0.96
DDX56-205ENST00000433257 Q75L30 129 aa9.05□□□□□ -0.96
DDX56-205ENST00000433257 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
DDX56-205ENST00000433257 Q6ZR54 194 aa9.04□□□□□ -0.96
DDX56-205ENST00000433257 KRTAP1-5Q9BYS1 174 aa9.04□□□□□ -0.96
DDX56-205ENST00000433257 ALMS1Q8TCU4 4167 aa9.03□□□□□ -0.96
DDX56-205ENST00000433257 COA5Q86WW8 74 aa9.03□□□□□ -0.96
DDX56-205ENST00000433257 CHKB-CPT1BH3BT56 60 aa9.02□□□□□ -0.97
DDX56-205ENST00000433257 CDK2AP2O75956 126 aa9.02□□□□□ -0.97
DDX56-205ENST00000433257 LINC00483Q53H64 154 aa9.02□□□□□ -0.97
DDX56-205ENST00000433257 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
DDX56-205ENST00000433257 HYDINQ4G0P3 5121 aa9.01□□□□□ -0.97
DDX56-205ENST00000433257 C8orf17Q9NRJ1 99 aa9□□□□□ -0.97
DDX56-205ENST00000433257 SACSQ9NZJ4 4579 aa9□□□□□ -0.97
DDX56-205ENST00000433257 DNAH1Q9P2D7 4330 aa9□□□□□ -0.97
DDX56-205ENST00000433257 SEC61GP60059 68 aa9□□□□□ -0.97
DDX56-205ENST00000433257 KMT2AQ03164 3969 aa9□□□□□ -0.97
DDX56-205ENST00000433257 CHTF8P0CG12 524 aa8.99□□□□□ -0.97
DDX56-205ENST00000433257 ATP11AUNQ6ZP68 121 aa8.98□□□□□ -0.97
DDX56-205ENST00000433257 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
DDX56-205ENST00000433257 VPS13DQ5THJ4 4388 aa8.98□□□□□ -0.97
DDX56-205ENST00000433257 A0A1B0GVX0 72 aa8.97□□□□□ -0.97
DDX56-205ENST00000433257 Q96NJ1 140 aa8.97□□□□□ -0.97
DDX56-205ENST00000433257 LINC01558Q9Y6Z2 57 aa8.97□□□□□ -0.97
DDX56-205ENST00000433257 RYR2Q92736 4967 aa8.96□□□□□ -0.97
DDX56-205ENST00000433257 MRPL34Q9BQ48 92 aaKnown RBP8.95□□□□□ -0.98
DDX56-205ENST00000433257 NBDYA0A0U1RRE5 68 aa8.94□□□□□ -0.98
DDX56-205ENST00000433257 RYR3Q15413 4870 aa8.94□□□□□ -0.98
DDX56-205ENST00000433257 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
DDX56-205ENST00000433257 A6NED7 52 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms