RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 PRO0255Q9UI72 69 aa0.94□□□□□ -2.26
CLK1-204ENST00000432425 APLNQ9ULZ1 77 aa0.94□□□□□ -2.26
CLK1-204ENST00000432425 WNK2Q9Y3S1 2297 aa0.93□□□□□ -2.26
CLK1-204ENST00000432425 DEFB130BP0DP73 79 aa0.93□□□□□ -2.26
CLK1-204ENST00000432425 DEFB130AP0DP74 79 aa0.93□□□□□ -2.26
CLK1-204ENST00000432425 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
CLK1-204ENST00000432425 RP1L1Q8IWN7 2480 aaPredicted RBP0.93□□□□□ -2.26
CLK1-204ENST00000432425 SPRR1AP35321 89 aa0.92□□□□□ -2.26
CLK1-204ENST00000432425 TPRP12270 2363 aaKnown RBP0.92□□□□□ -2.26
CLK1-204ENST00000432425 PCNX1Q96RV3 2341 aa0.92□□□□□ -2.26
CLK1-204ENST00000432425 STATHP02808 62 aa0.91□□□□□ -2.26
CLK1-204ENST00000432425 LINC01590Q5TEZ4 76 aa0.91□□□□□ -2.26
CLK1-204ENST00000432425 RPL39LQ96EH5 51 aaKnown RBP0.91□□□□□ -2.26
CLK1-204ENST00000432425 KAAG1Q9UBP8 84 aa0.91□□□□□ -2.26
CLK1-204ENST00000432425 ZNF462Q96JM2 2506 aa0.91□□□□□ -2.26
CLK1-204ENST00000432425 KLK9Q2XQG4 91 aa0.91□□□□□ -2.26
CLK1-204ENST00000432425 DEFB105AQ8NG35 78 aa0.91□□□□□ -2.26
CLK1-204ENST00000432425 ASH1LQ9NR48 2969 aaKnown RBP0.9□□□□□ -2.27
CLK1-204ENST00000432425 SPTBN1Q01082 2364 aaKnown RBP0.9□□□□□ -2.27
CLK1-204ENST00000432425 POLR2KP53803 58 aaKnown RBP0.9□□□□□ -2.27
CLK1-204ENST00000432425 CSPG4Q6UVK1 2322 aa0.9□□□□□ -2.27
CLK1-204ENST00000432425 LEAP2Q969E1 77 aa0.89□□□□□ -2.27
CLK1-204ENST00000432425 SPTBN2O15020 2390 aa0.89□□□□□ -2.27
CLK1-204ENST00000432425 SPINK9Q5DT21 86 aa0.88□□□□□ -2.27
CLK1-204ENST00000432425 CACNA1HO95180 2353 aa0.88□□□□□ -2.27
CLK1-204ENST00000432425 IGLV5-48A0A075B6I7 105 aa0.88□□□□□ -2.27
CLK1-204ENST00000432425 SPRR1BP22528 89 aa0.88□□□□□ -2.27
CLK1-204ENST00000432425 MMP24-AS1A0A0U1RRL7 71 aa0.87□□□□□ -2.27
CLK1-204ENST00000432425 WT1-ASQ06250 92 aa0.87□□□□□ -2.27
CLK1-204ENST00000432425 DSPP15924 2871 aaKnown RBP0.87□□□□□ -2.27
CLK1-204ENST00000432425 GVINP1Q7Z2Y8 2422 aa0.86□□□□□ -2.27
CLK1-204ENST00000432425 CD52P31358 61 aa0.86□□□□□ -2.27
CLK1-204ENST00000432425 Q5VSD8 79 aa0.86□□□□□ -2.27
CLK1-204ENST00000432425 A0A0D9SG42 100 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 PRLHP81277 87 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 DEFB119Q8N690 84 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 COX14Q96I36 57 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 PCNTO95613 3336 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 ABCA12Q86UK0 2595 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
CLK1-204ENST00000432425 H0YGG7 62 aa0.84□□□□□ -2.27
CLK1-204ENST00000432425 DEFB110Q30KQ9 67 aa0.84□□□□□ -2.27
CLK1-204ENST00000432425 F8P00451 2351 aa0.84□□□□□ -2.27
CLK1-204ENST00000432425 KRTAP10-4P60372 401 aaPredicted RBP0.84□□□□□ -2.28
CLK1-204ENST00000432425 DEFB104AQ8WTQ1 72 aa0.84□□□□□ -2.28
CLK1-204ENST00000432425 S4R3F8 94 aa0.84□□□□□ -2.28
CLK1-204ENST00000432425 ZNF292O60281 2723 aa0.83□□□□□ -2.28
CLK1-204ENST00000432425 CENPFP49454 3210 aa0.83□□□□□ -2.28
CLK1-204ENST00000432425 A0A0C4DFX4 3053 aa0.83□□□□□ -2.28
CLK1-204ENST00000432425 A8MTW9 85 aa0.83□□□□□ -2.28
CLK1-204ENST00000432425 ABCA2Q9BZC7 2435 aa0.83□□□□□ -2.28
CLK1-204ENST00000432425 SRCAPQ6ZRS2 3230 aa0.83□□□□□ -2.28
CLK1-204ENST00000432425 GOLGB1Q14789 3259 aaKnown RBP0.82□□□□□ -2.28
CLK1-204ENST00000432425 CELSR2Q9HCU4 2923 aa0.82□□□□□ -2.28
CLK1-204ENST00000432425 DEFB108AA8MXU0 73 aa0.82□□□□□ -2.28
CLK1-204ENST00000432425 DEFB131AP59861 70 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 RPL39P5Q59GN2 51 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 Q9Y3F1 56 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 CELSR1Q9NYQ6 3014 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 PRRC2CQ9Y520 2896 aaKnown RBP0.81□□□□□ -2.28
CLK1-204ENST00000432425 COL6A3P12111 3177 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 TRANK1O15050 2925 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 TTC28Q96AY4 2481 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 M0QY20 66 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 SPINK1P00995 79 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 PRCDQ00LT1 54 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 TOMM7Q9P0U1 55 aa0.81□□□□□ -2.28
CLK1-204ENST00000432425 MUC5ACP98088 5654 aa0.8□□□□□ -2.28
CLK1-204ENST00000432425 CHD7Q9P2D1 2997 aa0.8□□□□□ -2.28
CLK1-204ENST00000432425 SYNE2Q8WXH0 6885 aaKnown RBP0.8□□□□□ -2.28
CLK1-204ENST00000432425 H3BUA1 57 aa0.8□□□□□ -2.28
CLK1-204ENST00000432425 CLPSL2Q6UWE3 100 aa0.8□□□□□ -2.28
CLK1-204ENST00000432425 DNAH12Q6ZR08 3092 aa0.8□□□□□ -2.28
CLK1-204ENST00000432425 MEGF8Q7Z7M0 2845 aa0.79□□□□□ -2.28
CLK1-204ENST00000432425 SZT2Q5T011 3432 aa0.79□□□□□ -2.28
CLK1-204ENST00000432425 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
CLK1-204ENST00000432425 CEP290O15078 2479 aa0.79□□□□□ -2.28
CLK1-204ENST00000432425 POLQO75417 2590 aa0.79□□□□□ -2.28
CLK1-204ENST00000432425 CEP350Q5VT06 3117 aa0.79□□□□□ -2.28
CLK1-204ENST00000432425 USP34Q70CQ2 3546 aa0.78□□□□□ -2.28
CLK1-204ENST00000432425 APELAP0DMC3 54 aa0.78□□□□□ -2.28
CLK1-204ENST00000432425 UNC80Q8N2C7 3258 aa0.78□□□□□ -2.28
CLK1-204ENST00000432425 AKAP6Q13023 2319 aa0.78□□□□□ -2.28
CLK1-204ENST00000432425 UTRNP46939 3433 aa0.78□□□□□ -2.29
CLK1-204ENST00000432425 ACACAQ13085 2346 aa0.78□□□□□ -2.29
CLK1-204ENST00000432425 DEFB133Q30KQ1 61 aa0.78□□□□□ -2.29
CLK1-204ENST00000432425 TMEM167AQ8TBQ9 72 aa0.78□□□□□ -2.29
CLK1-204ENST00000432425 EP400Q96L91 3159 aa0.78□□□□□ -2.29
CLK1-204ENST00000432425 NCOR1O75376 2440 aa0.77□□□□□ -2.29
CLK1-204ENST00000432425 EP300Q09472 2414 aaPredicted RBP0.77□□□□□ -2.29
CLK1-204ENST00000432425 K7EIM0 57 aa0.77□□□□□ -2.29
CLK1-204ENST00000432425 DEFB1P60022 68 aa0.77□□□□□ -2.29
CLK1-204ENST00000432425 DNAH14Q0VDD8 3507 aa0.77□□□□□ -2.29
CLK1-204ENST00000432425 CHD9Q3L8U1 2897 aa0.77□□□□□ -2.29
CLK1-204ENST00000432425 C5orf42Q9H799 3197 aa0.76□□□□□ -2.29
CLK1-204ENST00000432425 AKAP13Q12802 2813 aa0.76□□□□□ -2.29
CLK1-204ENST00000432425 XIRP2A4UGR9 3374 aa0.76□□□□□ -2.29
CLK1-204ENST00000432425 DEFB109BQ30KR1 87 aa0.76□□□□□ -2.29
CLK1-204ENST00000432425 DEFB108BQ8NET1 73 aa0.76□□□□□ -2.29
CLK1-204ENST00000432425 CFAP47Q6ZTR5 3102 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms