RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 MT1FP04733 61 aa7.84□□□□□ -1.15
RPUSD3-204ENST00000424438 LINC01545Q5VT33 79 aa7.84□□□□□ -1.15
RPUSD3-204ENST00000424438 A6NDN8 102 aa7.83□□□□□ -1.16
RPUSD3-204ENST00000424438 IGFL1Q6UW32 110 aa7.83□□□□□ -1.16
RPUSD3-204ENST00000424438 Q96NJ1 140 aa7.82□□□□□ -1.16
RPUSD3-204ENST00000424438 LST1O00453 97 aa7.8□□□□□ -1.16
RPUSD3-204ENST00000424438 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
RPUSD3-204ENST00000424438 SMIM11BQ8TCY0 68 aa7.8□□□□□ -1.16
RPUSD3-204ENST00000424438 TTTY13Q9BZ97 58 aa7.8□□□□□ -1.16
RPUSD3-204ENST00000424438 PET117Q6UWS5 81 aa7.79□□□□□ -1.16
RPUSD3-204ENST00000424438 KRTAP10-10P60014 251 aa7.78□□□□□ -1.16
RPUSD3-204ENST00000424438 KRTAP19-6Q3LI70 58 aa7.78□□□□□ -1.16
RPUSD3-204ENST00000424438 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
RPUSD3-204ENST00000424438 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
RPUSD3-204ENST00000424438 PPDPFLQ8WWR9 84 aa7.78□□□□□ -1.16
RPUSD3-204ENST00000424438 NEBP20929 6669 aa7.78□□□□□ -1.16
RPUSD3-204ENST00000424438 VAMP3Q15836 100 aa7.77□□□□□ -1.17
RPUSD3-204ENST00000424438 Q6ZQY7 126 aa7.76□□□□□ -1.17
RPUSD3-204ENST00000424438 MPLKIPQ8TAP9 179 aa7.76□□□□□ -1.17
RPUSD3-204ENST00000424438 SS18L2Q9UHA2 77 aa7.76□□□□□ -1.17
RPUSD3-204ENST00000424438 SCGB1D1O95968 90 aa7.75□□□□□ -1.17
RPUSD3-204ENST00000424438 hADV29S1A0JD25 119 aa7.74□□□□□ -1.17
RPUSD3-204ENST00000424438 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
RPUSD3-204ENST00000424438 SLC7A5P1Q8MH63 180 aa7.74□□□□□ -1.17
RPUSD3-204ENST00000424438 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.72□□□□□ -1.17
RPUSD3-204ENST00000424438 FAM236DA0A1B0GTK5 79 aa7.71□□□□□ -1.18
RPUSD3-204ENST00000424438 FAM236CP0DP71 79 aa7.71□□□□□ -1.18
RPUSD3-204ENST00000424438 RBM12B-AS1Q9P1G2 102 aa7.7□□□□□ -1.18
RPUSD3-204ENST00000424438 COLCA2A8K830 154 aa7.69□□□□□ -1.18
RPUSD3-204ENST00000424438 HRES1P13985 223 aa7.68□□□□□ -1.18
RPUSD3-204ENST00000424438 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
RPUSD3-204ENST00000424438 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
RPUSD3-204ENST00000424438 TEN1Q86WV5 123 aa7.66□□□□□ -1.18
RPUSD3-204ENST00000424438 SNHG12Q9BXW3 62 aa7.66□□□□□ -1.18
RPUSD3-204ENST00000424438 ANKRD39Q53RE8 183 aa7.65□□□□□ -1.18
RPUSD3-204ENST00000424438 HIST1H2BKO60814 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BJP06899 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BOP23527 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BBP33778 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BDP58876 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BCP62807 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST2H2BEQ16778 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BHQ93079 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BNQ99877 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 HIST1H2BMQ99879 126 aa7.64□□□□□ -1.19
RPUSD3-204ENST00000424438 H3BUT2 72 aa7.62□□□□□ -1.19
RPUSD3-204ENST00000424438 BVES-AS1Q5T3Y7 98 aa7.61□□□□□ -1.19
RPUSD3-204ENST00000424438 DSCR10P59022 87 aa7.6□□□□□ -1.19
RPUSD3-204ENST00000424438 NOTCH2NLQ7Z3S9 236 aa7.6□□□□□ -1.19
RPUSD3-204ENST00000424438 A0A087WSZ3 146 aa7.58□□□□□ -1.2
RPUSD3-204ENST00000424438 SNRPEP62304 92 aaKnown RBP7.58□□□□□ -1.2
RPUSD3-204ENST00000424438 LINC00313P59037 77 aa7.57□□□□□ -1.2
RPUSD3-204ENST00000424438 KRTDAPP60985 99 aa7.57□□□□□ -1.2
RPUSD3-204ENST00000424438 COA6Q5JTJ3 125 aaKnown RBP7.57□□□□□ -1.2
RPUSD3-204ENST00000424438 MTURNQ8N3F0 131 aa7.57□□□□□ -1.2
RPUSD3-204ENST00000424438 C12orf57Q99622 126 aa7.55□□□□□ -1.2
RPUSD3-204ENST00000424438 A8MWP4 228 aa7.53□□□□□ -1.2
RPUSD3-204ENST00000424438 SIGMAR1Q99720 223 aa7.53□□□□□ -1.2
RPUSD3-204ENST00000424438 NDUFV3P56181 108 aaKnown RBP7.52□□□□□ -1.21
RPUSD3-204ENST00000424438 SNCGO76070 127 aa7.51□□□□□ -1.21
RPUSD3-204ENST00000424438 ATOH7Q8N100 152 aa7.51□□□□□ -1.21
RPUSD3-204ENST00000424438 MUC12Q9UKN1 5478 aa7.5□□□□□ -1.21
RPUSD3-204ENST00000424438 GHRHP01286 108 aa7.49□□□□□ -1.21
RPUSD3-204ENST00000424438 A0A1W2PNM2 257 aa7.46□□□□□ -1.22
RPUSD3-204ENST00000424438 H0YGX0 51 aa7.46□□□□□ -1.22
RPUSD3-204ENST00000424438 H3BMG7 143 aa7.46□□□□□ -1.22
RPUSD3-204ENST00000424438 IGKV4-1P06312 121 aa7.46□□□□□ -1.22
RPUSD3-204ENST00000424438 TRBV7-4A0A0J9YYF1 115 aa7.44□□□□□ -1.22
RPUSD3-204ENST00000424438 A0A1B0GX51 115 aa7.44□□□□□ -1.22
RPUSD3-204ENST00000424438 LINC00472Q9H8W2 130 aa7.42□□□□□ -1.22
RPUSD3-204ENST00000424438 C8orf87E5RJ46 101 aa7.4□□□□□ -1.22
RPUSD3-204ENST00000424438 RAB37Q96AX2 223 aa7.4□□□□□ -1.22
RPUSD3-204ENST00000424438 SPINK7P58062 85 aa7.39□□□□□ -1.23
RPUSD3-204ENST00000424438 ZCCHC13Q8WW36 166 aaKnown RBP7.39□□□□□ -1.23
RPUSD3-204ENST00000424438 FAM218AQ96MZ4 157 aa7.39□□□□□ -1.23
RPUSD3-204ENST00000424438 HSBP1L1C9JCN9 74 aa7.38□□□□□ -1.23
RPUSD3-204ENST00000424438 Q8N9P0 234 aaPredicted RBP7.38□□□□□ -1.23
RPUSD3-204ENST00000424438 HIST1H4GQ99525 98 aa7.37□□□□□ -1.23
RPUSD3-204ENST00000424438 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
RPUSD3-204ENST00000424438 FABP2P12104 132 aa7.35□□□□□ -1.23
RPUSD3-204ENST00000424438 ANKRD29Q8N6D5 301 aa7.35□□□□□ -1.23
RPUSD3-204ENST00000424438 A0A0B4J2C4 111 aa7.34□□□□□ -1.23
RPUSD3-204ENST00000424438 A0A1B0GVX0 72 aa7.33□□□□□ -1.24
RPUSD3-204ENST00000424438 H3BQ85 93 aa7.33□□□□□ -1.24
RPUSD3-204ENST00000424438 DLEU1O43261 78 aa7.3□□□□□ -1.24
RPUSD3-204ENST00000424438 DEFB116Q30KQ4 102 aa7.3□□□□□ -1.24
RPUSD3-204ENST00000424438 WFDC13Q8IUB5 93 aa7.29□□□□□ -1.24
RPUSD3-204ENST00000424438 TRACP01848 142 aa7.28□□□□□ -1.24
RPUSD3-204ENST00000424438 COX8AP10176 69 aa7.28□□□□□ -1.24
RPUSD3-204ENST00000424438 CCKP06307 115 aa7.26□□□□□ -1.25
RPUSD3-204ENST00000424438 HIST1H2BLQ99880 126 aa7.25□□□□□ -1.25
RPUSD3-204ENST00000424438 J3KT08 172 aa7.24□□□□□ -1.25
RPUSD3-204ENST00000424438 KRTAP2-3P0C7H8 128 aa7.24□□□□□ -1.25
RPUSD3-204ENST00000424438 KRTAP2-4Q9BYR9 128 aa7.24□□□□□ -1.25
RPUSD3-204ENST00000424438 ORMDL1Q9P0S3 153 aa7.24□□□□□ -1.25
RPUSD3-204ENST00000424438 HIGD1BQ9P298 99 aa7.24□□□□□ -1.25
RPUSD3-204ENST00000424438 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
RPUSD3-204ENST00000424438 TMEM256-PLSCR3K7ERE1 68 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms