RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 WT1-ASQ06250 92 aa1.66□□□□□ -2.14
PTP4A1P1-201ENST00000420539 MROH2BQ7Z745 1585 aa1.66□□□□□ -2.14
PTP4A1P1-201ENST00000420539 F8P00451 2351 aa1.65□□□□□ -2.15
PTP4A1P1-201ENST00000420539 MUC19Q7Z5P9 8384 aa1.65□□□□□ -2.15
PTP4A1P1-201ENST00000420539 MUC6Q6W4X9 2439 aa1.64□□□□□ -2.15
PTP4A1P1-201ENST00000420539 WFDC10BQ8IUB3 73 aa1.63□□□□□ -2.15
PTP4A1P1-201ENST00000420539 DEFB109BQ30KR1 87 aa1.61□□□□□ -2.15
PTP4A1P1-201ENST00000420539 ABCA12Q86UK0 2595 aa1.61□□□□□ -2.15
PTP4A1P1-201ENST00000420539 IGF2RP11717 2491 aa1.6□□□□□ -2.15
PTP4A1P1-201ENST00000420539 CHD9Q3L8U1 2897 aa1.6□□□□□ -2.15
PTP4A1P1-201ENST00000420539 KAAG1Q9UBP8 84 aa1.6□□□□□ -2.15
PTP4A1P1-201ENST00000420539 DSPP15924 2871 aaKnown RBP1.59□□□□□ -2.16
PTP4A1P1-201ENST00000420539 CLTCL1P53675 1640 aa1.58□□□□□ -2.16
PTP4A1P1-201ENST00000420539 S4R3F8 94 aa1.58□□□□□ -2.16
PTP4A1P1-201ENST00000420539 PCNX1Q96RV3 2341 aa1.58□□□□□ -2.16
PTP4A1P1-201ENST00000420539 GCC2Q8IWJ2 1684 aa1.58□□□□□ -2.16
PTP4A1P1-201ENST00000420539 PDE4DIPQ5VU43 2346 aa1.57□□□□□ -2.16
PTP4A1P1-201ENST00000420539 H3BUA1 57 aa1.57□□□□□ -2.16
PTP4A1P1-201ENST00000420539 TPRP12270 2363 aaKnown RBP1.56□□□□□ -2.16
PTP4A1P1-201ENST00000420539 ABCA2Q9BZC7 2435 aa1.56□□□□□ -2.16
PTP4A1P1-201ENST00000420539 TRANK1O15050 2925 aa1.55□□□□□ -2.16
PTP4A1P1-201ENST00000420539 CELSR2Q9HCU4 2923 aa1.55□□□□□ -2.16
PTP4A1P1-201ENST00000420539 PRLHP81277 87 aa1.54□□□□□ -2.16
PTP4A1P1-201ENST00000420539 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
PTP4A1P1-201ENST00000420539 DEFB106AQ8N104 65 aa1.53□□□□□ -2.16
PTP4A1P1-201ENST00000420539 IGLV5-48A0A075B6I7 105 aa1.52□□□□□ -2.17
PTP4A1P1-201ENST00000420539 AKAP6Q13023 2319 aa1.51□□□□□ -2.17
PTP4A1P1-201ENST00000420539 CSPG4Q6UVK1 2322 aa1.5□□□□□ -2.17
PTP4A1P1-201ENST00000420539 BDP1A6H8Y1 2624 aa1.5□□□□□ -2.17
PTP4A1P1-201ENST00000420539 CSMD3Q7Z407 3707 aa1.49□□□□□ -2.17
PTP4A1P1-201ENST00000420539 MMP24-AS1A0A0U1RRL7 71 aa1.48□□□□□ -2.17
PTP4A1P1-201ENST00000420539 KRTAP21-2Q3LI59 83 aa1.48□□□□□ -2.17
PTP4A1P1-201ENST00000420539 DEFB131AP59861 70 aa1.47□□□□□ -2.17
PTP4A1P1-201ENST00000420539 PIEZO1Q92508 2521 aa1.47□□□□□ -2.17
PTP4A1P1-201ENST00000420539 SPINK6Q6UWN8 80 aa1.45□□□□□ -2.18
PTP4A1P1-201ENST00000420539 ATRQ13535 2644 aa1.44□□□□□ -2.18
PTP4A1P1-201ENST00000420539 ANK2Q01484 3957 aa1.43□□□□□ -2.18
PTP4A1P1-201ENST00000420539 SMR3AQ99954 134 aa1.43□□□□□ -2.18
PTP4A1P1-201ENST00000420539 TENM4Q6N022 2769 aa1.42□□□□□ -2.18
PTP4A1P1-201ENST00000420539 VWFP04275 2813 aa1.42□□□□□ -2.18
PTP4A1P1-201ENST00000420539 CHD6Q8TD26 2715 aa1.41□□□□□ -2.18
PTP4A1P1-201ENST00000420539 POLR2KP53803 58 aaKnown RBP1.4□□□□□ -2.19
PTP4A1P1-201ENST00000420539 SPTA1P02549 2419 aa1.39□□□□□ -2.19
PTP4A1P1-201ENST00000420539 FBN2P35556 2912 aa1.39□□□□□ -2.19
PTP4A1P1-201ENST00000420539 RPL39P62891 51 aaKnown RBP1.39□□□□□ -2.19
PTP4A1P1-201ENST00000420539 NOP10Q9NPE3 64 aaKnown RBP1.39□□□□□ -2.19
PTP4A1P1-201ENST00000420539 DEFB135Q30KP9 77 aa1.38□□□□□ -2.19
PTP4A1P1-201ENST00000420539 PRRC2CQ9Y520 2896 aaKnown RBP1.38□□□□□ -2.19
PTP4A1P1-201ENST00000420539 KRTAP2-3P0C7H8 128 aa1.37□□□□□ -2.19
PTP4A1P1-201ENST00000420539 KRTAP19-3Q7Z4W3 81 aa1.37□□□□□ -2.19
PTP4A1P1-201ENST00000420539 KRTAP2-4Q9BYR9 128 aa1.37□□□□□ -2.19
PTP4A1P1-201ENST00000420539 KRTAP2-1Q9BYU5 128 aa1.37□□□□□ -2.19
PTP4A1P1-201ENST00000420539 AKAP13Q12802 2813 aa1.37□□□□□ -2.19
PTP4A1P1-201ENST00000420539 H0YGG7 62 aa1.35□□□□□ -2.19
PTP4A1P1-201ENST00000420539 HECTD1Q9ULT8 2610 aa1.35□□□□□ -2.19
PTP4A1P1-201ENST00000420539 CEP290O15078 2479 aa1.34□□□□□ -2.19
PTP4A1P1-201ENST00000420539 NCOR1O75376 2440 aa1.34□□□□□ -2.19
PTP4A1P1-201ENST00000420539 SPINK1P00995 79 aa1.34□□□□□ -2.19
PTP4A1P1-201ENST00000420539 CRCT1Q9UGL9 99 aa1.34□□□□□ -2.19
PTP4A1P1-201ENST00000420539 FRAS1Q86XX4 4008 aa1.34□□□□□ -2.2
PTP4A1P1-201ENST00000420539 M0R2T5 61 aa1.33□□□□□ -2.2
PTP4A1P1-201ENST00000420539 CELSR1Q9NYQ6 3014 aa1.33□□□□□ -2.2
PTP4A1P1-201ENST00000420539 RPL39LQ96EH5 51 aaKnown RBP1.32□□□□□ -2.2
PTP4A1P1-201ENST00000420539 PKD1L2Q7Z442 2459 aa1.31□□□□□ -2.2
PTP4A1P1-201ENST00000420539 APCP25054 2843 aa1.3□□□□□ -2.2
PTP4A1P1-201ENST00000420539 BSNQ9UPA5 3926 aa1.3□□□□□ -2.2
PTP4A1P1-201ENST00000420539 OTOGQ6ZRI0 2925 aa1.29□□□□□ -2.2
PTP4A1P1-201ENST00000420539 A0A0C4DFX4 3053 aa1.29□□□□□ -2.2
PTP4A1P1-201ENST00000420539 EP300Q09472 2414 aaPredicted RBP1.29□□□□□ -2.2
PTP4A1P1-201ENST00000420539 ARHGAP5-AS1Q96IT6 56 aa1.29□□□□□ -2.2
PTP4A1P1-201ENST00000420539 CHD8Q9HCK8 2581 aa1.29□□□□□ -2.2
PTP4A1P1-201ENST00000420539 M0QY20 66 aa1.28□□□□□ -2.2
PTP4A1P1-201ENST00000420539 CLPSL2Q6UWE3 100 aa1.28□□□□□ -2.2
PTP4A1P1-201ENST00000420539 U3KQA8 63 aa1.28□□□□□ -2.2
PTP4A1P1-201ENST00000420539 FBN3Q75N90 2809 aa1.28□□□□□ -2.2
PTP4A1P1-201ENST00000420539 ZNF469Q96JG9 3925 aaPredicted RBP1.26□□□□□ -2.21
PTP4A1P1-201ENST00000420539 TTTY10Q9BZA0 68 aa1.26□□□□□ -2.21
PTP4A1P1-201ENST00000420539 TNRC18O15417 2968 aaPredicted RBP1.26□□□□□ -2.21
PTP4A1P1-201ENST00000420539 TNXBP22105 4242 aa1.24□□□□□ -2.21
PTP4A1P1-201ENST00000420539 LEAP2Q969E1 77 aa1.24□□□□□ -2.21
PTP4A1P1-201ENST00000420539 KRTAP4-1Q9BYQ7 146 aa1.24□□□□□ -2.21
PTP4A1P1-201ENST00000420539 PRKDCP78527 4128 aaKnown RBP1.24□□□□□ -2.21
PTP4A1P1-201ENST00000420539 FAT2Q9NYQ8 4349 aa1.23□□□□□ -2.21
PTP4A1P1-201ENST00000420539 A8MTW9 85 aa1.23□□□□□ -2.21
PTP4A1P1-201ENST00000420539 SRRM2Q9UQ35 2752 aaKnown RBP1.23□□□□□ -2.21
PTP4A1P1-201ENST00000420539 H3BSH0 61 aa1.22□□□□□ -2.21
PTP4A1P1-201ENST00000420539 PRM1P04553 51 aa1.22□□□□□ -2.21
PTP4A1P1-201ENST00000420539 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
PTP4A1P1-201ENST00000420539 CREBBPQ92793 2442 aa1.21□□□□□ -2.22
PTP4A1P1-201ENST00000420539 UBR5O95071 2799 aaPredicted RBP1.2□□□□□ -2.22
PTP4A1P1-201ENST00000420539 NBASA2RRP1 2371 aa1.18□□□□□ -2.22
PTP4A1P1-201ENST00000420539 UNC79Q9P2D8 2635 aa1.17□□□□□ -2.22
PTP4A1P1-201ENST00000420539 MAP1BP46821 2468 aaKnown RBP1.16□□□□□ -2.22
PTP4A1P1-201ENST00000420539 ZFYVE26Q68DK2 2539 aa1.16□□□□□ -2.22
PTP4A1P1-201ENST00000420539 LINC01590Q5TEZ4 76 aa1.16□□□□□ -2.22
PTP4A1P1-201ENST00000420539 NOTCH1P46531 2555 aa1.15□□□□□ -2.22
PTP4A1P1-201ENST00000420539 LYSTQ99698 3801 aa1.15□□□□□ -2.22
PTP4A1P1-201ENST00000420539 PKD1L1Q8TDX9 2849 aa1.15□□□□□ -2.23
PTP4A1P1-201ENST00000420539 M0QZ58 72 aa1.15□□□□□ -2.23
PTP4A1P1-201ENST00000420539 TOMM7Q9P0U1 55 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms