RNA–Protein interactions for RNA: ENST00000416690.5

GTF3C3-203, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 326 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-203ENST00000416690 RAB14P61106 215 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 VBP1P61758 197 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 NPC2P61916 151 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 LSM3P62310 102 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MRPS36P82909 103 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SERF2P84101 59 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SSBP1Q04837 148 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 COX17Q14061 63 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 NEDD8Q15843 81 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ZNF726P1Q15940 193 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ATP6V1FQ16864 119 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 C4orf26Q17RF5 130 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 KRTAP6-1Q3LI64 71 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 KRTAP6-2Q3LI66 62 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 KRTAP19-5Q3LI72 72 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 KRTAP19-7Q3SYF9 63 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MRPL51Q4U2R6 128 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ORMDL2Q53FV1 153 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM128Q5BJH2 165 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 Q5BKY6 102 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 CENPWQ5EE01 88 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MEIG1Q5JSS6 88 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SAPCD1Q5SSQ6 148 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 S100A7L2Q5SY68 101 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 AKR1C8PQ5T2L2 129 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 LYRM7Q5U5X0 104 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TRIQKQ629K1 86 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 RPL7L1Q6DKI1 246 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 C22orf42Q6IC83 251 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 Q6JHZ5 121 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MRPL54Q6P161 138 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ZFP1Q6P2D0 407 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 CSAG1Q6PB30 78 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TEX261Q6UWH6 196 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM91Q6ZNR0 172 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 Q6ZQY7 126 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 C7orf65Q6ZTY9 151 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 C2orf91Q6ZV80 131 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SMIM15Q7Z3B0 74 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ADM2Q7Z4H4 148 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 COMMD7Q86VX2 200 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TEN1Q86WV5 123 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 BAGE2Q86Y30 109 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 BOD1L2Q8IYS8 172 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SLC7A5P1Q8MH63 180 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ORMDL3Q8N138 153 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 C9orf62Q8N4C0 152 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TOMM5Q8N4H5 51 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM229BQ8NBD8 167 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SCGB1C1Q8TD33 95 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 COX7B2Q8TF08 81 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SFT2D1Q8WV19 159 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SMIM4Q8WVI0 70 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MBD3L1Q8WWY6 194 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 CLEC2BQ92478 149 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 HIST1H2BAQ96A08 127 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 BORCS7Q96B45 105 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 S100A16Q96FQ6 103 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ATP6V1G3Q96LB4 118 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SCGB3A1Q96QR1 104 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 VPS25Q9BRG1 176 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TCEAL7Q9BRU2 100 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 PSMG3Q9BT73 122 aaPredicted RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SMIM2Q9BVW6 85 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MAP1LC3CQ9BXW4 147 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SMIM3Q9BZL3 60 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ACTR3CQ9C0K3 210 aaPredicted RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MAP1LC3BQ9GZQ8 125 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 WDR61Q9GZS3 305 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 GABARAPL1Q9H0R8 117 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 VCX3BQ9H321 246 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 VCX2Q9H322 139 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 PRO1933Q9H354 126 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MAP1LC3AQ9H492 121 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 C10orf95Q9H7T3 257 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ST20Q9HBF5 79 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 VCX3AQ9NNX9 186 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 NXT2Q9NPJ8 142 aaKnown RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 MANBALQ9NQG1 85 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 BIN3Q9NQY0 253 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM167BQ9NRX6 74 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 SPANXB1Q9NS25 103 aaPredicted RBP0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 CRIPTQ9P021 101 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 GSKIPQ9P0R6 139 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TMEM14CQ9P0S9 112 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ERG28Q9UKR5 140 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 BLOC1S6Q9UL45 172 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 CYSLTR1Q9Y271 337 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 ZFP30Q9Y2G7 519 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 TPRKBQ9Y3C4 175 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 CBY1Q9Y3M2 126 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 HSPB11Q9Y547 144 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 R4GN34 69 aa0.04□□□□□ -2.4
GTF3C3-203ENST00000416690 A0A087WVE0 104 aa0.03□□□□□ -2.4
GTF3C3-203ENST00000416690 LOC110117498A0A087WWA1 95 aa0.03□□□□□ -2.4
GTF3C3-203ENST00000416690 TRAV22A0A0B4J277 110 aa0.03□□□□□ -2.4
GTF3C3-203ENST00000416690 TRBV7-6A0A0J9YX20 115 aa0.03□□□□□ -2.4
GTF3C3-203ENST00000416690 TRBV7-4A0A0J9YYF1 115 aa0.03□□□□□ -2.4
GTF3C3-203ENST00000416690 MMP24-AS1A0A0U1RRL7 71 aa0.03□□□□□ -2.4
GTF3C3-203ENST00000416690 MYMXA0A1B0GTQ4 84 aa0.03□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms