RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 MT4P47944 62 aa2.31□□□□□ -2.04
LINC00343-202ENST00000415294 MED9Q9NWA0 146 aa2.31□□□□□ -2.04
LINC00343-202ENST00000415294 HMGB3O15347 200 aaKnown RBP2.3□□□□□ -2.04
LINC00343-202ENST00000415294 CXCL1P09341 107 aa2.3□□□□□ -2.04
LINC00343-202ENST00000415294 DEFA1P59665 94 aa2.3□□□□□ -2.04
LINC00343-202ENST00000415294 RPL39LQ96EH5 51 aaKnown RBP2.3□□□□□ -2.04
LINC00343-202ENST00000415294 LIMD2Q9BT23 127 aa2.3□□□□□ -2.04
LINC00343-202ENST00000415294 TMEM242Q9NWH2 141 aa2.3□□□□□ -2.04
LINC00343-202ENST00000415294 Q6ZUT4 128 aa2.29□□□□□ -2.04
LINC00343-202ENST00000415294 SMIM4Q8WVI0 70 aa2.29□□□□□ -2.04
LINC00343-202ENST00000415294 RNASE7Q9H1E1 156 aaKnown RBP2.29□□□□□ -2.04
LINC00343-202ENST00000415294 I3L3M4 83 aa2.28□□□□□ -2.04
LINC00343-202ENST00000415294 HRCT1Q6UXD1 115 aa2.28□□□□□ -2.04
LINC00343-202ENST00000415294 Q6ZQT0 140 aa2.28□□□□□ -2.04
LINC00343-202ENST00000415294 STX12Q86Y82 276 aa2.28□□□□□ -2.04
LINC00343-202ENST00000415294 OSTCQ9NRP0 149 aa2.28□□□□□ -2.04
LINC00343-202ENST00000415294 NHP2Q9NX24 153 aaKnown RBP2.28□□□□□ -2.04
LINC00343-202ENST00000415294 ZFP30Q9Y2G7 519 aa2.28□□□□□ -2.04
LINC00343-202ENST00000415294 C9orf170A2RU37 121 aa2.27□□□□□ -2.05
LINC00343-202ENST00000415294 C7orf77A4D0Y5 90 aa2.27□□□□□ -2.05
LINC00343-202ENST00000415294 C17orf112F2Z3M2 114 aa2.27□□□□□ -2.05
LINC00343-202ENST00000415294 LSM3P62310 102 aaKnown RBP2.27□□□□□ -2.05
LINC00343-202ENST00000415294 RHEBQ15382 184 aa2.27□□□□□ -2.05
LINC00343-202ENST00000415294 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
LINC00343-202ENST00000415294 Q5VV11 94 aa2.27□□□□□ -2.05
LINC00343-202ENST00000415294 MRPS10P82664 201 aaKnown RBP2.26□□□□□ -2.05
LINC00343-202ENST00000415294 LINC01554Q52M75 96 aa2.26□□□□□ -2.05
LINC00343-202ENST00000415294 C9orf153Q5TBE3 101 aa2.26□□□□□ -2.05
LINC00343-202ENST00000415294 GCHFRP30047 84 aa2.25□□□□□ -2.05
LINC00343-202ENST00000415294 CKS1BP61024 79 aa2.25□□□□□ -2.05
LINC00343-202ENST00000415294 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
LINC00343-202ENST00000415294 IGLC6P0CF74 106 aa2.24□□□□□ -2.05
LINC00343-202ENST00000415294 AKAP14Q86UN6 197 aa2.24□□□□□ -2.05
LINC00343-202ENST00000415294 LOC107984156A0A0G2JMH3 177 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 BAALC-AS2P0C853 105 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 LYRM7Q5U5X0 104 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 LCA10Q71F78 164 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 ARL17AQ8IVW1 177 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 TOMM7Q9P0U1 55 aa2.23□□□□□ -2.05
LINC00343-202ENST00000415294 IGKV3D-7A0A0C4DH55 119 aa2.22□□□□□ -2.05
LINC00343-202ENST00000415294 A0A1W2PRE2 83 aa2.22□□□□□ -2.05
LINC00343-202ENST00000415294 IFNA1P01562 189 aa2.22□□□□□ -2.05
LINC00343-202ENST00000415294 S100A5P33763 92 aa2.22□□□□□ -2.05
LINC00343-202ENST00000415294 UBE2G1P62253 170 aa2.22□□□□□ -2.05
LINC00343-202ENST00000415294 F8VRH5 84 aa2.21□□□□□ -2.06
LINC00343-202ENST00000415294 ERC2-IT1O76042 136 aa2.21□□□□□ -2.06
LINC00343-202ENST00000415294 TMEM167BQ9NRX6 74 aa2.21□□□□□ -2.06
LINC00343-202ENST00000415294 TRBV27A0A0K0K1C4 114 aa2.2□□□□□ -2.06
LINC00343-202ENST00000415294 FAUP35544 74 aaKnown RBP2.2□□□□□ -2.06
LINC00343-202ENST00000415294 POLR2KP53803 58 aaKnown RBP2.2□□□□□ -2.06
LINC00343-202ENST00000415294 NEDD8Q15843 81 aa2.2□□□□□ -2.06
LINC00343-202ENST00000415294 Q8IZM0 81 aa2.2□□□□□ -2.06
LINC00343-202ENST00000415294 OBSCN-AS1Q96MR7 158 aa2.2□□□□□ -2.06
LINC00343-202ENST00000415294 IMUPQ9GZP8 106 aa2.2□□□□□ -2.06
LINC00343-202ENST00000415294 VBP1P61758 197 aa2.19□□□□□ -2.06
LINC00343-202ENST00000415294 HIST1H2BLQ99880 126 aa2.19□□□□□ -2.06
LINC00343-202ENST00000415294 ST20Q9HBF5 79 aa2.19□□□□□ -2.06
LINC00343-202ENST00000415294 F2Z2F3 143 aa2.18□□□□□ -2.06
LINC00343-202ENST00000415294 FCER1GP30273 86 aa2.18□□□□□ -2.06
LINC00343-202ENST00000415294 HBBP68871 147 aa2.18□□□□□ -2.06
LINC00343-202ENST00000415294 Q5XG85 94 aa2.18□□□□□ -2.06
LINC00343-202ENST00000415294 TEX261Q6UWH6 196 aa2.18□□□□□ -2.06
LINC00343-202ENST00000415294 NDUFB6O95139 128 aa2.17□□□□□ -2.06
LINC00343-202ENST00000415294 SPRR1AP35321 89 aa2.17□□□□□ -2.06
LINC00343-202ENST00000415294 RPL39P62891 51 aaKnown RBP2.17□□□□□ -2.06
LINC00343-202ENST00000415294 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
LINC00343-202ENST00000415294 MRPS36P82909 103 aaKnown RBP2.17□□□□□ -2.06
LINC00343-202ENST00000415294 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.17□□□□□ -2.06
LINC00343-202ENST00000415294 BAGE2Q86Y30 109 aa2.16□□□□□ -2.06
LINC00343-202ENST00000415294 TOMM5Q8N4H5 51 aa2.16□□□□□ -2.06
LINC00343-202ENST00000415294 CNFNQ9BYD5 112 aa2.16□□□□□ -2.06
LINC00343-202ENST00000415294 SMIM3Q9BZL3 60 aa2.16□□□□□ -2.06
LINC00343-202ENST00000415294 ETDCA0A1B0GVM5 59 aa2.15□□□□□ -2.07
LINC00343-202ENST00000415294 C9orf62Q8N4C0 152 aa2.15□□□□□ -2.07
LINC00343-202ENST00000415294 Q96NJ1 140 aa2.15□□□□□ -2.07
LINC00343-202ENST00000415294 SPRR2GQ9BYE4 73 aa2.15□□□□□ -2.07
LINC00343-202ENST00000415294 SPANXA1Q9NS26 97 aa2.15□□□□□ -2.07
LINC00343-202ENST00000415294 SIX6O95475 246 aa2.14□□□□□ -2.07
LINC00343-202ENST00000415294 SNURFQ9Y675 71 aa2.14□□□□□ -2.07
LINC00343-202ENST00000415294 HSPB11Q9Y547 144 aa2.13□□□□□ -2.07
LINC00343-202ENST00000415294 MUC5BQ9HC84 5762 aaPredicted RBP2.12□□□□□ -2.07
LINC00343-202ENST00000415294 RBM3P98179 157 aaKnown RBP2.12□□□□□ -2.07
LINC00343-202ENST00000415294 SMIM15Q7Z3B0 74 aa2.12□□□□□ -2.07
LINC00343-202ENST00000415294 TCEAL7Q9BRU2 100 aa2.12□□□□□ -2.07
LINC00343-202ENST00000415294 KCNQ1DNQ9H478 68 aa2.12□□□□□ -2.07
LINC00343-202ENST00000415294 CCDC160A6NGH7 325 aa2.11□□□□□ -2.07
LINC00343-202ENST00000415294 ALKAL2Q6UX46 152 aa2.11□□□□□ -2.07
LINC00343-202ENST00000415294 CDKN2A-AS1Q9UH64 79 aa2.11□□□□□ -2.07
LINC00343-202ENST00000415294 TRAV12-1A0A0B4J245 112 aa2.1□□□□□ -2.07
LINC00343-202ENST00000415294 SFT2D1Q8WV19 159 aa2.1□□□□□ -2.07
LINC00343-202ENST00000415294 TMEM191AQ9H0A3 160 aa2.1□□□□□ -2.07
LINC00343-202ENST00000415294 C14orf132Q9NPU4 83 aa2.1□□□□□ -2.07
LINC00343-202ENST00000415294 Q6ZRX8 168 aa2.09□□□□□ -2.08
LINC00343-202ENST00000415294 COX7B2Q8TF08 81 aa2.09□□□□□ -2.08
LINC00343-202ENST00000415294 TMEM141Q96I45 108 aa2.09□□□□□ -2.08
LINC00343-202ENST00000415294 CTXND1A0A1B0GTU2 59 aa2.08□□□□□ -2.08
LINC00343-202ENST00000415294 NDUFC2O95298 119 aa2.08□□□□□ -2.08
LINC00343-202ENST00000415294 IFI27P40305 119 aaPredicted RBP2.08□□□□□ -2.08
LINC00343-202ENST00000415294 PSMG3Q9BT73 122 aaPredicted RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms